Triplophysa dalaica: 130427465
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Entry
130427465 CDS
T09616
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tdw
Triplophysa dalaica
Pathway
tdw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130427465 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130427465 (xrcc5)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
130427465 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
130427465
NCBI-ProteinID:
XP_056610937
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All DBs
Position
8:complement(24084475..24092582)
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AA seq
726 aa
AA seq
DB search
MARAAKSALVLCMDVGFSMSNSEPGQEPPFDQAKKVIQKFVQRQVFDENKDEVGLVLFGT
DETKNRLAKDGQYQNITVRRHLMIPDFELLEEIQNELQPGGQQADWLDALVVCMDLLQQE
TMGKKYNCLNVVMLTDLHVQTSADQLDVIIENLKKAGITLQFFLPFPLNEDGGDEGGSGS
GSAAHPPRPGKGLTREQTQGLEMVRNIVTALDEEGGLQEVHTFSDAVEKLSIFKPIARRP
MAWPCQLTIGTSLTIRIVGYKAVTEEKVKKTWAVVDAESHQKDDVKRETVYCRDDDEETE
VQKDETIQGYRYGSDIVPFSKVDEDQMKYKHDGKTFTVLGFTKQELIHRHQFMGSQVVKV
FAPRDDEHAAVALSALIGALDGLKMAAIVRYAYDRRSNPQVGVAFPCIKEKYECLLYVQL
PFMEDLRQFTFPMLENNKKFAASGSQLSAVDALIDSMMLVEKDEDGETVDIFKPNQVPNP
QFQRLYQCLHHRGVNPDGPLPALEPWLQRVLERPQAVSARCQAPLRYIGTEFPLKEVVKK
KELKTSADVFGSSAEEPDAKRVKVSDETEFNLADITEGIVTSVGSVNPARDFQRLIRQKS
IPFHQACQQLIGRIEQLLGNRSPEYYMKSITCIQAFREQSVKCGNAESFNSYMQSLKRSV
PDRNLQEFWDLLVQDALTLISSDEVDSSSISKQDATQFVELEQKVDAEAASVKDDTGDVD
DLLDMM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcagcgaagtcagcattggtgctgtgcatggatgtgggtttctccatgagt
aactcagaacctggtcaggaaccgcccttcgatcaggccaaaaaagtcatccagaagttt
gtccagcggcaggtgtttgatgagaacaaggatgaggtgggtctggtgctgtttggtacg
gatgaaaccaagaaccgtctggccaaagatggtcagtatcagaacatcactgtccgtcgc
catctgatgattcctgattttgagctgctggaagagattcagaatgaactgcagcctggc
ggtcaacaagccgactggctcgatgctcttgttgtgtgcatggatctcttgcagcaagaa
accatgggaaagaaatacaattgtctgaatgtggtgatgttgacggatctacacgtacag
acgtctgcagaccagctcgatgttataattgagaacctgaagaaagcaggaatcactctg
cagttctttttgccgtttcctttgaatgaagacggaggtgatgaaggtgggtctggctct
gggtcagctgcgcatcccccccgcccgggaaagggcttgacgagagagcagactcaaggt
ctggagatggtcaggaacatcgttaccgctctggatgaggagggcggtctgcaggaagtc
cacacttttagtgatgcggtggagaagctgtccatcttcaaacctatcgcccggaggccg
atggcctggccctgtcagctcaccatcggcacctcgctaaccatccgcatcgtgggatac
aaagcggtgactgaggagaaggtgaagaagacgtgggccgtggttgacgctgaatctcac
caaaaagacgatgtcaagagagagacggtttactgtcgggacgatgatgaagaaacggaa
gtgcagaaggacgagacgattcaaggttaccgttatggaagtgacattgttccattttct
aaggtggatgaggaccaaatgaaatataaacacgatgggaaaacttttacagttcttggc
ttcactaaacaggagctgattcatcgtcatcagtttatgggaagccaggttgtcaaagtt
tttgcgcccagagatgatgagcacgcggctgtagctctctctgccctgattggtgctctt
gatggtctaaagatggcagccatagtgcgttatgcttacgatcgtcgtagtaaccctcaa
gttggcgtggccttcccttgcattaaggagaaatatgaatgtttactgtacgttcagctg
ccgtttatggaagacctgcgacagttcactttcccaatgttagaaaacaacaagaagttt
gcagcttcagggtcgcagctgtcggcggtggatgcgctcatcgactccatgatgctggtg
gagaaagatgaagacggcgagaccgtggatatatttaaacccaaccaggttccaaaccca
cagttccagaggctttatcagtgcttgcatcatcgcggtgtgaatccagacggtcctctc
ccagcgttagagccctggctgcagagggttctagagcgacctcaggccgtgtccgcccgc
tgtcaggctccgctgcgatacatcgggacagaattcccactgaaagaagtggtgaaaaag
aaagagttgaagacgagcgcagacgtgtttggaagcagtgccgaagagcccgatgccaag
agagtgaaagtcagcgatgagacagaatttaacctggccgacatcacggagggaatcgtc
acatcggttggtagcgtgaatccagcgagagatttccaaagactgatcagacagaagagc
attcctttccatcaggcgtgtcagcagctgattggcaggattgaacagttgctgggcaac
aggagcccagagtactacatgaagagcatcacctgtatccaagccttcagagaacagtcc
gtcaagtgtggaaacgcagagtcgttcaacagttacatgcagtctctgaagaggagcgtt
cccgaccggaaccttcaggaattctgggacctcctcgtccaggatgctctcacgctgatc
agcagtgatgaagtggacagcagctctatctccaaacaagatgcaacgcagtttgtggag
ttggagcagaaggtggatgcagaggcggcttcagtgaaggacgacactggtgacgttgat
gatttgttggacatgatgtag
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