Triplophysa dalaica: 130427540
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Entry
130427540 CDS
T09616
Symbol
rnf17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130427540 (rnf17)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130427540 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_2
SH2_2
zf-RING_Vps41
CYP38_PsbQ-like
Motif
Other DBs
NCBI-GeneID:
130427540
NCBI-ProteinID:
XP_056611045
LinkDB
All DBs
Position
8:14994810..15018233
Genome browser
AA seq
1298 aa
AA seq
DB search
MSESAVVCNICGSVYTLPEDEVYGNLPRALLCSHIFCTTCLRALESPQNVITCTECEIET
SLGEDGVDGLEVDSRIVGLIYTARMNTKKGPSGGRSKSRMAKSPASTAAVDTEEIAELKR
DRFKVLDEALMKATENLNKLDSLYQTLVNGIPAQLRKERSRIIREIDVAVDKAKSILLKR
RSVLMSKLSAVDLLFSAGQKECKRIEERVKELRTAIQKARHVRQVPSLGTYCNLDEILET
LHLPVDVESYDMSSLSLHSGLRCSLQVDSLTECFKNFLKIINDDDDVILEEVTVEPFQYQ
VKSEESGKRVEVWDNLSLGATGSDNAKLKKKSPQKEFPERKAESRKLLADVIDHTDACAE
MVETGQPRHRERHWMHRKQRRLQVDKSSTSHPKLVHYVMVSHIENPGNFHVRYMMEHKSA
HRLTQKINTFCTEESSLFTFSDEIKTDSLLFVWWKMDTWCRGKVTELFQKGCIQNVPKCL
ASEVSRVCFFFLDHGFSKGLTIPSDKGLCKLNECVRKPDGVALAEMNAWIPMAIKCSLKD
IIPSDLVRGWSTEASDEMRSLLGSKAVEMHVFGDEGGTLLVDLKKAPMVSIREHLVFMEL
ARFYCPMAAPGSSKPLLFYPPVHPKKDVEVNAVLSHVNTPSDFYVQLVENMEYLLLHSKL
QDCYGPLAADDEFQIYCPSLSQACVARYDQEWYRAQVTGFPGGRMVDVRYVDFGYKKTLS
VKDLRQIKDEFFALPEMGVRCTLADVSSLEDVWSDEACKELKGLVENKLVTVVAKKLVPV
TSPVPVCLFEISDDGTGASIGELLVRKGLAVSSKQALDIDLPSLETTVWDPPFEEELHVE
LTSPSPDSEELKPTLTLPTCLNDIRVRVTHVTSPGNICVQLLQFDCHLNRIHDILKNLYS
KSEPQEMEWEGEMFCAANNTGVWERGQVCSVSSSSVAEVLRCDFGNIVNLSVNNLRPLRP
DLIGSYLLECNLSGIRPAGGRSTWTATACETISQFLTGATAIMTVKDPTVMPVLIFLFCS
NRAGQNISIADFLISEGLALKERKDASLSQNAFSEECVLNGENTESKRTETPPQTPPTPS
PRFNPPPERVKTHAYSPPDMPPRGHALMSISAISDQGVIYAMTHEAVCEFDRLRERLQQH
IKTLPRQKNYNWKGVLGCAVMGTDMYWYRGHVMEVIGGHVKVRYVDQGLVESIPVCHVYP
VVLCEDVAQLCIPCQINGVISIGKGWQLDAVMFMKELLLGRSVNVHIMEHPEDPCGCVTV
EITVDGMVLSKILVHHQYATYDPRLQKPRGVCGQASHP
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatcggcagttgtttgtaatatttgcggctcggtgtacacattgcccgaagat
gaagtttatgggaatcttccgcgcgcgctgttgtgcagtcatatcttctgcaccacatgt
ctgcgcgcgcttgagtctccgcagaacgtcatcacgtgtacggaatgtgagatagaaacc
agtcttggtgaggatggtgttgatggtttagaggtggacagcagaatcgttggcctcatc
tatactgcacggatgaacacaaaaaaagggccttcaggagggagatcgaaatctcgaatg
gcaaagagcccagcctcaactgcagctgtcgacacagaggagattgctgaactgaaacga
gaccgatttaaggttttggatgaagcgcttatgaaggccacggaaaacctgaataaactt
gattcactttaccagactctggtgaatggtattccagctcagctgaggaaagagagatcc
agaattatcagagaaattgatgttgccgtagataaagcaaaaagcattctgcttaaaaga
cggagtgtattgatgtccaaattgagtgctgtggatcttctcttctcggctggccagaag
gaatgtaaaagaatagaagagagagtgaaagagctacggactgccattcaaaaagctcga
catgtccgtcaggttccttctcttgggacttactgcaatctagatgagattttggagact
ttacaccttccagtggatgttgagtcatatgacatgagttctctgtccttgcattcagga
ctcaggtgcagtcttcaggtggacagtctgactgaatgctttaaaaactttcttaaaatc
atcaatgacgatgatgatgttatcttggaagaagttacagttgagcctttccaataccaa
gtgaagagtgaggaatctgggaaaagagttgaggtctgggacaacttaagtctgggtgct
acgggaagtgacaacgccaagcttaaaaagaaaagccctcaaaaagaatttccagaaaga
aaagcagaaagccgtaaactccttgcggacgttattgatcatacggatgcttgcgcagag
atggtggaaacaggacaacccaggcacagagagagacactggatgcacagaaaacagcga
aggctccaggttgacaagtcttcaacgtcacatcctaaattggtgcattacgttatggtg
agccacatcgagaaccctggcaatttccacgtacgatatatgatggaacacaagtcagca
catagactgacacaaaagatcaacacattctgcacagaagagagtagcctcttcacattt
agtgatgaaatcaagacagactctctgctctttgtctggtggaagatggatacgtggtgt
agaggaaaagtgaccgagctctttcagaaggggtgtatccagaatgttcctaaatgcctc
gcttccgaagtctcccgggtgtgttttttcttcttggaccatggcttctccaagggattg
acaatcccaagtgataaaggtttatgcaagttgaacgaatgtgttcggaaacctgatgga
gttgctctggctgaaatgaatgcctggattcctatggccatcaaatgttcccttaaagat
attattccttcagacctggtgagagggtggagtacagaagcaagtgatgaaatgaggtct
ctgctgggctccaaggccgttgagatgcatgtgttcggagatgaaggcggcacgctcttg
gtggatctgaaaaaggcaccaatggtgtctattcgagaacacttggttttcatggaactg
gccagattctactgtcctatggcagctcctggatccagcaagcccttgctgttttatcct
ccagttcaccccaaaaaagatgttgaggtcaatgcggtgctttctcatgtcaacacacct
tcagacttctatgtgcaattagttgaaaatatggagtacttgctgttgcactcgaaactt
caggactgttatggcccacttgcagcggacgacgagttccagatctactgcccctctctg
tcacaggcttgtgttgctcgctatgaccaagagtggtacagggcccaggtcacaggtttc
cctggtggtcgaatggttgacgtgcggtatgtggactttggctataaaaaaactctgtct
gtgaaagatttgagacagataaaggatgagttctttgctctgccagaaatgggggttcgg
tgcactttggctgatgtgtccagtttggaggatgtgtggagcgatgaagcatgtaaagag
ctaaagggacttgtagagaataaacttgtcactgttgtggcaaaaaagcttgtgcccgtc
actagccctgtacctgtgtgtctgtttgagatcagtgatgatggtaccggtgctagtatc
ggagagctgttggtcagaaagggtcttgcggtttccagtaaacaggctctggatattgac
ctcccatcactggagacaactgtgtgggatcctccgtttgaagaggaactgcatgttgag
ctgacttccccgtctcctgattctgaagagctcaagcccaccctgaccctgcccacttgt
ctcaacgacatcagggttcgagtgacacatgtcacctctcctggaaacatctgtgtgcag
ctgctgcagtttgactgtcacctaaacagaatccatgacatcctgaagaatctgtacagt
aagtcagagccacaggagatggaatgggaaggggagatgttctgcgccgctaataacaca
ggagtgtgggaaagaggacaggtttgcagtgtgtcctccagcagtgttgcagaggttttg
cgttgtgactttggcaatattgtgaatctctctgtgaacaatctccgaccccttcgtcct
gatctgattggctcttacttactggagtgtaatctcagtggtataaggccagctggtggt
cgctccacatggacagccacggcatgtgagacaatctctcagttcttgaccggggcaacg
gctataatgaccgtaaaggatccaaccgtcatgccggtgttaatatttctgttctgttca
aaccgggctggtcagaacatcagtatcgcagatttccttatcagtgaaggtcttgcactc
aaggagagaaaggatgcttccctatcccagaatgctttttcagaggaatgtgtgctgaat
ggggagaacacggagtcaaagcgaactgagactccaccccagactccacccacaccttcc
ccccgcttcaatcctccaccagagagagtaaaaacacatgcctactcccctccagatatg
cctccccggggacacgcactcatgagcatctcagccatctctgaccaaggtgtcatttat
gctatgacgcatgaagcagtttgcgagtttgatcgcttacgtgaacgtcttcagcagcac
attaaaactctgcccaggcagaagaactacaactggaaaggtgttttagggtgtgctgtc
atgggtacagacatgtactggtacaggggtcatgtgatggaggttattggaggacacgtt
aaggtacgatatgtggatcagggtcttgtggaaagtattcctgtttgccacgtgtatcca
gtggttctctgtgaggatgtggcacagctctgtataccctgtcagataaatggagtcatt
tcgattggaaagggatggcagttggacgctgtgatgttcatgaaggaattgctgcttgga
cgttcagtcaacgttcacataatggaacaccctgaggatccatgtggctgtgttaccgtc
gagataaccgtggatggcatggtcctcagcaaaatattggtgcaccaccagtatgccacc
tatgatccccgacttcaaaagccaagaggagtatgtggtcaagcctcccatccctga
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