Triplophysa dalaica: 130427818
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Entry
130427818 CDS
T09616
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130427818 (lingo1b)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130427818 (lingo1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_9
LRR_RPS2
V-set
LRR_Zer-1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
130427818
NCBI-ProteinID:
XP_056611485
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Position
1:complement(11570941..11584013)
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAGEANGHSYLMACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLIALPEGIPIDTRLLDLSKNRLKAMNPEEFLNYPHLEELQLNENVIAVIEPGAFSNL
LGLRTLGLRNNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLSLRLRHLNINIIQDYSFRRL
YRLKVLEIANWPLLETLTARSLHGLNITTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLASIEPYSFRGLNYLRVLNVSSNSLSTLEESAFHSV
GNLEMLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCETPEFLQGKEFKDFPDVLPANY
FTCEKSKIRDHKALHRYVDEGTTVQFPCQADGDPAPVILWQSPKKQFITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYMCFAVNAGGNDTRSAHLHVHSFSPNWPHQPNKTFAFISNQPND
GGANGTGATDPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKVDGDSSPTEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggctggagaggcaaatgggcacagctac
ctcatggcatgctggcagcccattctcatcctgatgctgggtaccgtcctgtccggctcc
gccaccggctgcccttctcgctgcgaatgcagcgcccaagagcgctctgtcgtgtgccac
cgacggaagctgatcgctctccccgagggaattcccattgatacgcggctgctggatctc
agcaagaaccgcctgaaagccatgaaccccgaggagtttctcaattacccgcacctggag
gagctacagcttaatgagaacgtgattgcagtcatcgaaccgggggctttcagtaacctc
cttggcttaagaacgctgggactgcgcaacaacaagcttaagttgatccagctgggtgtg
ttcactggcctcagtaacctcactaagttagatataagtgagaataagattgtcattttg
ttggactatatgtttcaagacctttacaacctgaaggagctagaggtgggggataatgac
ctggtgtttatctctcaccgagcttttcacggcctcagtagcctggagcagctcacaatg
gaaagatgcaacctgacctctgtgccaacagaggccttcagtcatcttcacaacctgctg
tccctcaggctgcgccatctcaacatcaacatcattcaagactattccttcaggaggctc
tatcgactcaaagtcttagagatagcaaactggccacttttagagaccttgactgccagg
tccctccacgggcttaacatcacaaccctgagtatcacaaactgcaatcttactgctgtc
ccttacgtggccattcaacacctggtttaccttcgctttttcaacctgtccttcaatcca
attgaggtcgtggagggcaacaaaatgcacaatttgctgaggctccaggcgtttcacttg
gtagggggccggctagcgagcatcgagccttattctttcagaggactcaactaccttcgg
gttctcaatgtatccagcaatagtctaagcactttagaggagtctgcgtttcactcggtc
ggcaacctggagatgctggctctccacgacaaccccctggcgtgtgactgtcgtctgctc
tgggtctttcgccgtcgatggagactcaatttcaaccgccagcagccatcttgtgagacg
ccagagtttttgcagggtaaagagtttaaagactttccggacgttctcccggccaattat
ttcacctgtgaaaaatcaaagatacgagatcacaaagcccttcatcgatacgtggatgag
gggaccacagttcaattcccttgccaggcagatggagacccagcaccagtgattctgtgg
cagtctcccaaaaagcaatttattactacaaaaagcatcggccggctgtctgtgtctcca
gacggcaccctggaggttagatacgcccaaatacaagacaatggcacgtacatgtgtttt
gccgtcaacgcagggggcaacgacacccgttcggcccacctgcatgttcatagcttttct
cctaattggccccatcagcccaataagacctttgccttcatctcaaaccagcccaatgat
ggtggtgcaaatgggactggtgctacagatccctttccctttgacatgaagactctcatt
atcgctacaactatggggtttatctcgttccttggagtggtgctgttctgtctggtgctc
ctgttcctctggagtcgaggaaaaggcaatgccaagccaaacatcgagattgagtacgtg
ccacgaaaagtagatggagacagcagcccgacggagggatcgcacaagatcagtatgaag
atgatttaa
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