Triplophysa dalaica: 130427933
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Entry
130427933 CDS
T09616
Name
(RefSeq) integrin beta-2-like isoform X1
KO
K06464
integrin beta 2
Organism
tdw
Triplophysa dalaica
Pathway
tdw04145
Phagosome
tdw04514
Cell adhesion molecule (CAM) interaction
tdw04517
IgSF CAM signaling
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130427933
04517 IgSF CAM signaling
130427933
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130427933
09142 Cell motility
04810 Regulation of actin cytoskeleton
130427933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130427933
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130427933
04515 Cell adhesion molecules [BR:
tdw04515
]
130427933
04090 CD molecules [BR:
tdw04090
]
130427933
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130427933
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130427933
Cell adhesion molecules [BR:
tdw04515
]
Integrins
Integrin beta subunits
130427933
CD molecules [BR:
tdw04090
]
Proteins
130427933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
130427933
NCBI-ProteinID:
XP_056611668
LinkDB
All DBs
Position
8:complement(21720589..21737119)
Genome browser
AA seq
769 aa
AA seq
DB search
MTQEMLQSVCLRGLLLLLVGKHVCTQEQCLKASVKSCGDCIISGPGCAWCKDLNFNKPGE
QEAVRCDTVAVLTDKGCSAIIDPQNKLNKISIKPLTNGSHPVQITPQEIELNLRPGKPHT
FTVTFKRAEGYPVDLYYLMDLSYSMKDDLENVKKLGSDLLNELKRKTGNARIGFGAFVDK
TLLPFTDTNEVKLQRPCPDKNEPCQPAFGFEHVLSLTADGKKFKKMVAKQHISGNLDAPE
GSLDAIMQAAVCMKEIGWGNSTRLLVLATDDGFHMAGDGKLAAILEPNQGTCQLVNNKYS
KSNFWDYPSVGQIARKLEEQNIQPIFAVTKKMESVYESLSQLIPKSAVGVLSDDSSNVVN
LIVDAYNNLTSEVIMAHDFLPNHISIKYASDCKDGEMFSDRGRCANVAIGQTVAFDVTVT
AEKCIKNQTFNIGPLGFGEKLKVTVSTRCECECDDTNKPHPHCGGSGVVVCGGCRCNQGF
IGGHCECQIGQKDEASLRAQCKKDNGTECEGKGDCVCGRCQCHITEGNSQYYGEFCDCDD
EHCENFNNTQCGGHGQCKCGKCKCHEGYEGTACHCAISDVACKTQGTVCHNRGTCVCNQC
ECLREYKRPYCKECPTCQAPCQQSASCVECLAFESGPFKKNCSEACNHLKLSISEKLAKS
DCRVKDAEGCWMTFTMTEQDGFDKYLVNVLKSRDCPKGPNIAAIVGGSLAGGALIGLLIL
LIVKACLHARDLRDWRRFEEDRKLEKFSGINPIFQNATIIQNPTFSEDS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggaaatgctgcaatcggtttgtctgaggggacttctcctgttgttggtggga
aaacatgtgtgcacacaggagcaatgcttaaaagcttctgttaaatcatgtggagactgc
atcatatctggacctggctgtgcctggtgtaaagatttgaatttcaacaagcctggagag
caggaagcagtacgttgcgacactgttgctgtgctgacagataaagggtgctcagctata
atagacccccagaataaattaaacaaaatttcaatcaagcccctgacgaatggctctcat
ccagtacaaatcactccacaagaaatagagctgaatcttagaccagggaaaccccacaca
tttacagtaacttttaaaagagctgaaggctatcctgtggacctttactacctgatggat
ctctcctactctatgaaagatgatctggagaatgttaaaaagctgggatcagatttactc
aatgagcttaagagaaagactggcaatgccagaataggctttggtgcatttgtcgacaag
actttgcttccattcacggacaccaacgaagtgaagctccaaagaccttgtcctgacaaa
aatgaaccatgtcaaccagcctttggctttgagcacgtactttctctgactgccgatgga
aagaaattcaaaaaaatggtagccaagcagcacatatctggaaacctggacgcaccagag
ggaagtctggacgccatcatgcaagctgcagtctgcatgaaagagatcggctggggaaac
agcactcggctgctggtgctggccacagatgatggcttccacatggcaggggacggtaaa
ctcgccgccattctggaaccaaaccaaggaacttgtcagctggtcaacaacaagtacagc
aagagcaacttctgggattacccatctgttggtcagatagctcggaagctagaggagcaa
aatatacaaccaatttttgccgtcaccaagaaaatggaaagtgtgtacgaaagcctcagt
caactgatccccaagtcagctgttggagtgctttctgacgactcgagcaatgtggttaat
ctgattgtggatgcatacaataacttaacctctgaagtgattatggcccatgatttcctc
ccaaaccacatatctattaaatatgcatcagactgtaaagatggagaaatgttcagtgac
agggggagatgtgctaatgtggctattggacaaacggtggcttttgatgttacagtgaca
gcagagaaatgcattaaaaaccagacgttcaacattgggcccttgggctttggtgaaaaa
ctaaaggtgactgtttccactcgatgtgagtgcgagtgtgacgatacaaataaacctcat
cctcactgcgggggtagtggagtagtggtctgtggtggctgcaggtgtaaccagggtttc
ataggggggcattgtgagtgccagataggccaaaaagacgaagcctcattgagagctcag
tgcaagaaagacaacgggacggagtgcgagggaaaaggagactgtgtgtgcgggcgctgc
caatgtcacatcacagagggcaacagtcaatactacggcgaattctgtgattgtgacgat
gagcactgtgaaaactttaacaatacacagtgtggaggtcatggccaatgcaaatgtggt
aaatgtaagtgtcacgaaggctatgagggaacggcgtgtcactgtgcaatatctgatgta
gcctgcaagacacaaggaaccgtgtgtcacaaccgtggcacgtgtgtatgtaaccagtgc
gaatgcctaagggaatacaagaggccctactgcaaagaatgtcctacatgtcaagccccc
tgtcaacaatcagcgagttgtgttgaatgtttggcctttgaaagcggtccgttcaagaag
aactgctcagaagcatgcaatcaccttaaactcagcattagtgaaaaactggccaagagc
gactgtcgcgtcaaagatgcagaagggtgctggatgacatttacaatgactgagcaagat
ggatttgacaagtacttggtcaatgtcctaaaaagcagagattgtcccaaagggccaaac
atagcggccatcgtaggaggatctctggcaggtggagctctgattggtctcttgatccta
ctcattgtcaaggcatgccttcatgcaagggacctaagagattggagaagattcgaagaa
gacaggaaacttgaaaaattctccggtatcaatccaatattccagaacgcaaccataatt
caaaatccaacattttctgaagattcttga
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