Triplophysa dalaica: 130427960
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Entry
130427960 CDS
T09616
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130427960 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130427960 (hspd1)
03110 Chaperones and folding catalysts [BR:
tdw03110
]
130427960 (hspd1)
03029 Mitochondrial biogenesis [BR:
tdw03029
]
130427960 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130427960 (hspd1)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
130427960 (hspd1)
Messenger RNA biogenesis [BR:
tdw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
130427960 (hspd1)
Chaperones and folding catalysts [BR:
tdw03110
]
Heat shock proteins
HSP60 / Chaperonin
130427960 (hspd1)
Mitochondrial biogenesis [BR:
tdw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
130427960 (hspd1)
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130427960 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
130427960 (hspd1)
Exosomal proteins of breast cancer cells
130427960 (hspd1)
Exosomal proteins of colorectal cancer cells
130427960 (hspd1)
Exosomal proteins of bladder cancer cells
130427960 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
130427960
NCBI-ProteinID:
XP_056611713
LinkDB
All DBs
Position
8:complement(16318537..16323943)
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AA seq
575 aa
AA seq
DB search
MLRLSTVMRNIRPVSRALAPHLTRSYAKEIKFGAEARALMLQGVDLLADAVAVTMGPKGR
NVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAVAKEGFDTISKGANPVEIRKGVMTAVETVINELKRTSKPVTTPEEIAQVATISSNGDT
EVGEIISNAMKKVGRRGVITVKDGKTMHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLLDIAVSTGGTVFGDDAMGLAIEDIQAHDFGKVGEVIVTKDDTMLLKG
RGDAAAIEKRVNEITEQLESTNSDYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDNIKPVNADQKIGIDIIRRALRIPAMTIA
RNAGVEGSLVVEKILQSAPEIGYDALNGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLC
TAEAVVTEIPKEEKEMPSGGMGGMGGMGGMGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtttatccactgtgatgagaaatataaggccggtcagcagggcgctggccccg
catttgacccgttcatacgctaaggagatcaagtttggagctgaagcccgggccctcatg
ctccagggcgttgacctgttggctgatgctgtggctgtcaccatgggaccaaagggtcgc
aacgtcatcattgagcagagctggggaagccccaaggtcaccaaagatggtgtcacagta
gccaaaagcattgacctgaaggataagtataagaacataggagccaagcttgtacaggac
gtagctaacaacactaatgaggaggctggagatggcactacaaccgccacggtgctggcc
cgtgcggttgcaaaggagggatttgacaccattagcaaaggcgccaaccccgtagagatc
cgtaaaggagtcatgacagcagtggaaactgttatcaatgaactaaaaagaacctctaag
ccggtaacaacaccagaggagattgcccaggtggccaccatttcttccaatggagacact
gaggttggtgaaatcatctccaatgccatgaagaaagtaggacgtagaggtgttattaca
gtaaaggatggtaaaaccatgcatgatgaacttgagatcattgaaggaatgaagtttgac
cgtggttacatttctccttacttcatcaacactgctaaaggtcagaagtgtgagttccag
gatgcttatgtgcttctaagtgagaaaaagatatccagtgtacagagcattgtgccggca
ctggaacttgctaaccagcatcgcaagcctctggtcattgtggctgaagatgtggatgga
gaagcacttagcactctggtcctaaacaggttaaaggttggactgcaggttgttgcagtc
aaggctccaggattcggggacaaccgaaagaaccagctgctggacatagctgtgtccact
ggtggcactgtgtttggtgatgatgctatgggtctggccattgaagatatccaggcacat
gactttggcaaggttggcgaggtcattgtgacgaaggatgacacgatgctccttaaagga
cgtggtgatgcagcagccattgagaaacgtgtgaatgagatcaccgaacagctggaaagc
acaaacagcgactatgagaaggagaaactgaacgagcgtctggcaaaactctctgatgga
gtggctgtgataaaggttggaggcactagtgacgttgaagtaaatgaaaagaaagaccgt
gtcactgatgctctgaatgccactcgagctgctgtggaggagggaatcgttcttggtgga
ggatgtgccctcctgcgctgcatcccagccctggataacatcaaacctgtcaatgctgat
cagaaaataggtatcgacattattcgcagagccctgcgtattcctgccatgaccattgct
aggaacgccggagttgagggctctctggtggttgagaagatcttacagagtgctccagaa
atcggatacgatgctttgaatggagaatatgtcaacatggttgaaaagggaattattgac
cccacaaaggtcgtaaggacagcactcttggatgctgcaggtgttgcttctctcttgtgt
accgctgaagccgtcgtcacggaaattcccaaggaggagaaggaaatgcctagtggagga
atgggtggtatgggaggcatgggaggcatgggtggcatgggcttctaa
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