Triplophysa dalaica: 130427970
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Entry
130427970 CDS
T09616
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
tdw
Triplophysa dalaica
Pathway
tdw04145
Phagosome
tdw04514
Cell adhesion molecule (CAM) interaction
tdw04517
IgSF CAM signaling
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130427970
04517 IgSF CAM signaling
130427970
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130427970
09142 Cell motility
04810 Regulation of actin cytoskeleton
130427970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130427970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130427970
04515 Cell adhesion molecules [BR:
tdw04515
]
130427970
04090 CD molecules [BR:
tdw04090
]
130427970
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130427970
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130427970
Cell adhesion molecules [BR:
tdw04515
]
Integrins
Integrin beta subunits
130427970
CD molecules [BR:
tdw04090
]
Proteins
130427970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
Integrin_b_cyt
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
I-EGF_1
vWA_SIBA-E
Vpu
Motif
Other DBs
NCBI-GeneID:
130427970
NCBI-ProteinID:
XP_056611730
LinkDB
All DBs
Position
8:complement(21743157..21754227)
Genome browser
AA seq
770 aa
AA seq
DB search
MSQEMLQSVCLRGLLLLLVGKHVCTQEQCLKASVNSCEDCITNGPGCAWCKDLNFTKPGE
QEAVRCDTVAVLKHKGCSALIDPQNNLNKISIKPLTNGSNPVQISPQEIELNLRPGKPHT
FTVTFKRADGYPVDLYYLMDLSYSMKDDLENVKKLGSDLLNELNRKTGNARIGFGAFVDK
TLLPFTDTNEVKLQRPCPDKNEPCQPAFGFEHVLSLTADGNKFKKMVAKHHISGNLDAPL
GSLDAIMQAAVCMKEIGWRNSTRLLVLATDDGFHMAGDGKLAAILEPNQGTCQLVNNKYS
KSNFWDYPSVGQIALKLEEQNIQPIFAITKKMESVYKSLSQLIPKSAVGVLSDDSSNVVN
LIVDAYNNLTSEVIMAHDFLPNHISIKYASDCKDGEMLSHRGRCANVAIGQTVAFDVTVT
AEKCIKNQTFNIGPLGFGEKLKVTVSTRCECECDDTNKPHPHCGGNGVVVCGGCRCNQGF
IGGHCECQIGQKDEASLRAQCKKDNGTECEGKGDCVCGRCQCHITEGNSQYYGEFCDCDD
EHCENFNNTQCAGHGQCKCGKCKCHEGYEGTACHCAISDVACKTQGTVCHNRGTCVCNQC
ECQREYRGPYCKECPTCQAPCQQSASCVECLAFESGPFKKNCSEACNHLKLSISEKLAKS
DCRVKDAEGCWMTFTMTEQDGFDKYLVNVLKSRDCPKGPNIAAIVGGSLAGVALIGLLIL
LIVKACFYASDLRDWRRFEKDRKLEKLSGTNPLFQNATTTVQNPTFSGDS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggaaatgctgcaatcggtttgtctgaggggacttctcctgttgttggtggga
aaacatgtgtgcacacaggagcaatgcttaaaagcttctgttaactcatgtgaagactgc
atcacaaatgggcctggttgtgcctggtgtaaagacttgaatttcaccaagcccggagag
caggaagcagtacgttgcgacactgttgctgtgctgaaacataaagggtgctcagcttta
atagacccccagaataacttaaacaaaatttcaatcaagcccctgacgaatggctctaat
ccggtacaaatctctccacaagaaatagagctgaatcttagaccagggaaaccccacaca
tttacagtaacttttaaaagagctgatggctatcctgtggacctttactacctgatggat
ctctcctactctatgaaagatgatctggagaatgttaaaaagctgggatcagatttactc
aatgagcttaatagaaagacgggcaatgccagaataggctttggtgcatttgtcgacaag
actcttcttccattcacggacaccaacgaagtgaagctccaaagaccttgtcctgacaaa
aatgaaccatgtcaaccagcctttggctttgagcacgtactttctctgactgccgatgga
aacaaattcaaaaaaatggtagccaagcaccacatatctggaaacctggacgcaccattg
ggaagtctggacgccatcatgcaagctgcagtctgcatgaaagagatcggctggcgaaac
agcactcggctgctggtgctggccacagatgatggcttccacatggcaggggacggtaaa
ctcgccgccattctggaaccaaaccaaggaacttgtcagctggtcaacaacaagtacagc
aagagcaacttctgggattacccatctgttggtcagatagctctgaagctagaggagcaa
aatatacaaccaatttttgccatcaccaagaaaatggaaagtgtgtacaaaagcctcagt
caactgatccccaagtcagctgttggagtgctttctgacgactcgagcaatgtggttaat
ctgattgtggatgcatacaataacttaacctctgaagtgattatggcccatgatttccta
ccaaaccacatatctattaaatatgcatcagactgtaaagatggagaaatgctcagtcac
agggggagatgtgctaatgtggctattggacagacggtggcttttgatgttacagtgaca
gcagagaaatgcattaaaaaccagacgttcaacattgggcccttgggctttggtgaaaaa
ctaaaggtgactgtttccactcgatgtgagtgcgagtgtgacgatacaaataaacctcat
cctcactgcgggggtaatggagtagtggtctgtggtggctgcaggtgtaaccagggtttc
ataggggggcattgtgagtgccagataggccaaaaagacgaagcctcattgagagctcag
tgcaagaaagacaacgggacggagtgcgagggaaaaggagactgtgtgtgcgggcgctgc
caatgtcacatcacagagggcaacagtcaatactacggcgaattctgtgattgtgacgat
gagcactgtgaaaactttaacaatacacagtgtgcaggtcatggccaatgcaaatgtggt
aaatgtaagtgtcacgaaggctatgagggaacggcgtgtcactgtgcaatatctgatgta
gcctgcaagacacaaggaaccgtgtgtcacaaccgtggaacgtgtgtttgtaaccagtgc
gaatgccaaagggaatacagggggccttactgcaaagaatgtcctacatgtcaagcccct
tgtcaacaatcagcgagttgtgttgaatgtttggcctttgaaagcggtccgttcaagaag
aactgctcagaagcatgcaatcaccttaaactcagcattagtgaaaaactggccaagagc
gactgtcgcgtcaaagatgcagaagggtgctggatgacatttacaatgactgagcaagat
ggatttgacaagtacttggtcaatgtcctaaaaagcagagattgtcccaaagggccaaac
atagcggccatcgtaggaggatctctggctggtgtggctctgattggactcctgatccta
ctcattgtcaaggcatgcttttatgcaagcgatctaagagattggagaagattcgaaaaa
gacaggaaacttgaaaaattatctggtaccaatccattattccagaacgcaaccaccaca
gttcaaaatccaacattttctggagattcttga
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