Triplophysa dalaica: 130428019
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Entry
130428019 CDS
T09616
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tdw
Triplophysa dalaica
Pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130428019 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130428019 (u2af1)
Spliceosome [BR:
tdw03041
]
Complex A
U2 snRNP components
U2 related factors
130428019 (u2af1)
Complex B
130428019 (u2af1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
130428019
NCBI-ProteinID:
XP_056611811
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Position
8:4266621..4272135
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AA seq
254 aa
AA seq
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MSSFIRRLIIIEKCLGNCVLCLIASPWVPRVSFIVLRSDLVNCSFYFKIGACRHGDRCSR
LHNKPTFSQTIALLNIYRNPQNTAQSADGINAVSDVEMQEHYDEFFEEVFTEMEEKYGEV
EEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCR
QYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKRHRSRSRSRERRSRSRERNRGGRER
ERRRSRDRERSGRF
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttttatacggcgattaattattattgaaaaatgtttaggaaattgtgttctt
tgtctcatagcgtcgccgtgggtgccgcgcgtctcattcattgtgttgcgatctgatttg
gttaactgctcgttctacttcaaaattggagcatgtcgccacggagatcggtgttccaga
ctccacaacaagcccacattcagccagaccattgctctcctgaacatctacagaaaccca
caaaacacagcacagtctgcagatggaataaatgctgtcagcgatgttgagatgcaagaa
cattacgatgagttctttgaggaggtgtttactgaaatggaagagaagtatggagaggtt
gaggagatgaatgtttgtgataatttaggagatcacttggtgggcaatgtctatgtgaag
ttccggcgtgaagaagacgctgagaaggcagtgattgatttgaataaccgctggtttaat
ggccagcccatccatgccgagctctctcctgtcactgacttcagagaggcttgttgtcga
cagtatgagatgggagagtgcactcgcggtggcttctgcaatttcatgcatctgaagcca
atttcaagggagctcaggagagagctgtatggccgcagaagaaagaggcatcgctctcgt
tcacgttctcgtgagaggcgctctcgttctcgagaacgcaatagaggtggaagagaacgg
gagaggcggaggtcaagagatagggaacgctctggacgattttaa
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