Triplophysa dalaica: 130428105
Help
Entry
130428105 CDS
T09616
Symbol
actn4
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-actinin-4
KO
K05699
actinin alpha 1/4
Organism
tdw
Triplophysa dalaica
Pathway
tdw04510
Focal adhesion
tdw04520
Adherens junction
tdw04530
Tight junction
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130428105 (actn4)
04520 Adherens junction
130428105 (actn4)
04530 Tight junction
130428105 (actn4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130428105 (actn4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130428105 (actn4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdw04812
]
130428105 (actn4)
04147 Exosome [BR:
tdw04147
]
130428105 (actn4)
Membrane trafficking [BR:
tdw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130428105 (actn4)
Cytoskeleton proteins [BR:
tdw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130428105 (actn4)
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130428105 (actn4)
Exosomal proteins of colorectal cancer cells
130428105 (actn4)
Exosomal proteins of bladder cancer cells
130428105 (actn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_5
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
130428105
NCBI-ProteinID:
XP_056611934
LinkDB
All DBs
Position
9:3972261..4010378
Genome browser
AA seq
902 aa
AA seq
DB search
MVDYHAATNNPVQYSSGAQQTYMEQENDWDRDMLLDPAWERQQRKTFTAWCNSHLRKSGT
QIDNIEEDFRDGLKLMLLLEVIAGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSI
GAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFH
ISWKDGLAFNALIHRHRPELIDYDKLRKDDPVTNLNNAFEVAERYLDIPKMLDAEDIVNT
ARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWI
RRTIPWLENRAPEKTMTEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNR
PAFMPSEGRMVSDINGSWHKLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHESWT
DGKEAMLTQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSP
SVNARCQNICEQWDALGSLTQSRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAME
DLQDMFIVHNIEEIQGLITAHEQFKSTLPEANKEREAIQAIHSEVQKIAQYNGIKLAGNN
PYTTITPQSIDSKWDKVQKLVPQRDQALQEELSRQQSNDHLRRQFANQANMIGPWIQNKM
EEIGRISIEMNGTLEDQLTHLRQYEQSIIEYKPNIDQLEGDHQLIQEALIFDNKYTTYTM
EHLRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRTSFNHFDKDHSGVLAAEE
FKACLISLGYDVENNKQADAEFARIMGIVDPTTXGAVTFQAFIDFMSRETTDTDTADQVI
ASFKILAGDKNYITAEELRRELPPDQAEYCIARMAPYTGPDGIPGALDYMSFSTALYGES
DL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcacgccgctactaataatccagtccaatattcgtcgggcgcgcaacag
acctacatggagcaagaaaacgactgggaccgagacatgctgctcgacccggcctgggag
agacagcaaaggaagactttcacggcttggtgcaactctcacctgcggaagtcgggaacg
caaatcgacaacatcgaggaggatttcagagatggactcaaactaatgctgctcctagag
gtcatcgcaggggagagattaccaaaacctgaaagaggcaagatgagagtgcacaagatc
aacaatgtcaacaaagcgctggacttcatcgccagcaaaggagtcaaactggtgtcgatt
ggtgccgaagaaattgtggatggaaacgccaagatgactctgggaatgatttggaccatc
atcctccgctttgccatccaggacatctcagtggaggaaacctcggctaaagaagggttg
ttgctctggtgtcagagaaagactgctccttacaagaatgtcaacgttcaaaacttccat
atcagctggaaggatggtcttgccttcaatgctctgatccatagacacagaccagagctc
attgattatgacaaactgagaaaggatgacccagtgaccaatctgaacaatgcttttgaa
gtggcagagcgataccttgatatcccaaaaatgttggatgcagaggacatagtgaacact
gcacgtccagatgagaaagccataatgacctatgtgtccagtttctaccatgcattttct
ggagcccagaaggctgagacggcagccaatcgtatctgcaaggtgttggctgtcaatcaa
gagaacgagcacctgatggaagactacgaaaagctggctagtgatttgttggagtggata
cgcaggacaattccatggttggaaaaccgtgctccagaaaagaccatgacagaaatgcag
cagaaactggaagatttccgtgactatcggcgcgttcacaaaccacccaaagtccaggag
aagtgtcagctagagatcaacttcaacacattgcagaccaaacttcgtctgagcaaccga
ccggcctttatgccatctgaaggacgcatggtgtctgacattaacgggtcatggcataaa
ctggaaggcgcagagaaaggctatgaagagtggctactgaatgaaatccgtcgtttggag
aggcttgaccatctcgcagaaaaattccgccagaaagcagctatccacgagagctggaca
gatggtaaagaggccatgctaacacagaaggattatgagactgcgactctatctgagatc
aaagctcttcttaagaagcacgaggcgttcgagagcgacctcgccgctcaccaggaccga
gtggagcagattgctgccatcgcacaggagctcaatgagctggactattatgactctcca
agtgttaatgcacgctgtcagaacatctgtgagcagtgggatgctctgggttctcttaca
cagagccgtagagagtctcttgagaggacagagaaacagctggagtccattgacgaactc
tatctggagtacgccaagagagcagcaccattcaacaactggatggaaggggccatggag
gatcttcaagacatgttcattgtacacaacatagaggagatccagggactgataacagct
cacgagcagttcaagtccactcttccagaggcgaataaagagcgggaagctatccaagcc
atccactctgaagttcagaaaatcgctcagtacaatggcatcaaactggctggaaacaat
ccctacaccaccatcacccctcagagcattgacagcaagtgggacaaggtgcaaaaactg
gtaccacagcgtgatcaggctcttcaggaagaactctctcgccagcagtctaatgaccat
ctcagacggcagtttgccaaccaggccaatatgatcggaccatggatacaaaacaagatg
gaggagatcggccgaatatcaatcgagatgaatggaacgttggaggatcaactaacccat
ctgcgtcagtatgagcaaagtatcattgaatacaaacccaacattgatcaactggaggga
gaccatcagctcattcaggaagcacttatatttgacaacaaatacaccacatatacaatg
gagcatctgcgtgttggttgggagcaactcctcactacgatcgctcgcactatcaacgag
atcgagaaccagattctcactcgtgacgctaaaggcatcagtcaggagcagcttcacgag
taccgcacatccttcaatcacttcgacaaggaccacagtggcgtcttagcagctgaggag
ttcaaggcttgtttgatcagtcttggttacgacgtagaaaacaacaagcaggctgatgct
gaatttgctcgtattatgggcatcgttgacccaacaacangcggcgcagtgaccttccaa
gcgtttatagacttcatgtcgagggaaacgactgatacagacaccgcagaccaggtcatc
gcctcatttaagatcctagctggagacaagaactacatcacagcagaagagttgaggcgc
gagcttcctcccgaccaggcggaatactgcattgcccgaatggcaccatatacaggccca
gacggcatcccgggtgcacttgactacatgtccttctccaccgccctgtacggagagagc
gacctctaa
DBGET
integrated database retrieval system
