Triplophysa dalaica: 130428342
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Entry
130428342 CDS
T09616
Symbol
hif1al
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tdw
Triplophysa dalaica
Pathway
tdw04137
Mitophagy - animal
tdw04140
Autophagy - animal
tdw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130428342 (hif1al)
04137 Mitophagy - animal
130428342 (hif1al)
04148 Efferocytosis
130428342 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130428342 (hif1al)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130428342 (hif1al)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
130428342
NCBI-ProteinID:
XP_056612258
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Position
9:complement(13912339..13924064)
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AA seq
614 aa
AA seq
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MVNSANKRPSLEQRKVRSRDAARCRRSQETEVYYELAHSLPLPRRIASHLDKAAIMRVTL
SYLRMNRLIQSGSSKTQCREETEDPTDGFYQQALAGFILVLTEEGDMVFLSDSVSKYIGI
AQLELLGQSVYEFVHPCDQEELRDILTSRPGLTKKNSEKLTEYNFFLRMKSTLTHTGRTV
NIKSANWKVLHCTGHMQTLSSEDESSPPAGSFLTLICEPIPHPSSVEFPLDSSTFLTRHN
MDLTFTQCDGRVTELVGYHTDDLIGRSAYEFYHALDFDHVTRSLHTLFSKGQVCTSHYRF
LAKNGGFVWTETQATLIYNSKTSQPEAVVCLNFILSGVEQADVVFSLEQTCDTSKPNVEV
LSVLKEVDSDIEESSTADLFLQMKENPEELLQLAPHSGDAIISLTEGVMLSFGRPPSPSS
IPECPQDFCTPELRQLLSPIFDKSPSAASPAEELPVEGDGVERFFALKPEESITVKSLTE
NMDELDLDMLAPYISMDDDFQLTFLSQCPEMVTSSSEMQSKTSRKRGLEDDDIPVLAAKW
EERKMGSSIEDXLQKNSEEFELPPQKRTHLLTDRDPLLGGTPSLCDTAALMRKSFLHRPP
DLMKPIANMALSLT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactctgcgaataaaaggccgagtttggagcagcggaaggtgcgttcgcgggat
gcagcgcggtgtaggaggagccaggaaacagaggtgtattacgaactggctcactctctg
cccctcccacgacgcatcgcttcacacctggacaaagctgccatcatgagggtgacgctc
agctatctccgcatgaaccgtctcatccaatccgggtcttccaaaacacagtgccgagag
gagaccgaggaccccactgatgggttttatcagcaggcactggctggtttcattctggtc
ttgacagaagaaggagatatggtcttcctctcagacagtgtcagcaaatatattggcata
gcacaactggagttgcttggacagagtgtgtatgagtttgttcatccatgtgatcaagaa
gaattgagagacatcctcaccagtagaccaggtcttacaaagaagaattcagaaaagttg
accgaatacaacttttttcttcgaatgaagagcactctcactcacacaggacgaacagtt
aatatcaagtctgccaactggaaggttcttcactgcacaggacacatgcagactctcagt
agtgaagatgaaagctcaccccctgctggcagtttcctcacattgatctgcgagcccatt
cctcacccctcaagtgttgaatttcccctggatagcagcaccttcctcacgcgccataat
atggatctgactttcacacagtgtgatggacgtgtcaccgagcttgttggataccacacc
gatgatctgattggccgatcagcctatgagttttaccacgcccttgattttgatcatgtg
accaggagtttacacaccttgttctccaagggccaggtatgcaccagtcactaccgcttc
ctggctaagaacggaggctttgtttggaccgagacccaagccaccctcatctacaacagc
aagacctctcaacctgaggccgtggtctgcctaaacttcatcctcagtggggtggagcag
gcagacgttgtgttctcattagaacagacctgtgatacatcaaaacccaatgttgaggtg
ctgagcgtgctcaaggaggtcgactcagacatagaggagagcagcactgccgatctgttc
ctccagatgaaggagaaccctgaggagttactgcagctggcacctcactctggagacgct
atcatttctctaacagagggtgtgatgttgtcatttggccgaccaccgagtcccagcagc
ataccagaatgcccgcaggacttctgtacacctgagctccgccaactcctctcaccaata
ttcgacaaatccccatcagctgcgagcccagctgaagagctgccagtggagggggatggg
gtggagagattctttgctcttaaacctgaggagagcataactgtgaaaagcctgacggag
aacatggatgagcttgatctggacatgctggctccatatatctcaatggatgatgacttc
cagttgaccttcctgtcccagtgtcccgagatggttacgtcatcttcagaaatgcaaagc
aaaacttcaaggaaacgaggtttagaagatgatgacattcctgttctggctgccaaatgg
gaggagagaaaaatgggcagctccattgaagatnttttacagaaaaactcagaagagttt
gaattaccacctcaaaagcgaactcaccttttgaccgacagagatcctttactgggagga
actccgtcattgtgtgatacagcagctttgatgaggaagagctttctgcaccggccaccg
gatttaatgaaaccaattgctaacatggcattgtcgctcacttga
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