Triplophysa dalaica: 130428381
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Entry
130428381 CDS
T09616
Name
(RefSeq) protein Atg16l2
KO
K20868
autophagy-related protein 16-2
Organism
tdw
Triplophysa dalaica
Pathway
tdw04140
Autophagy - animal
tdw04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
130428381
04140 Autophagy - animal
130428381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130428381
03029 Mitochondrial biogenesis [BR:
tdw03029
]
130428381
Membrane trafficking [BR:
tdw04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
130428381
Others
Specific organelles associated proteins
Auto phagosome
130428381
Mitochondrial biogenesis [BR:
tdw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130428381
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ATG16
WDR90_beta-prop_4th
DSE1_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_WDR41
Ge1_WD40
Beta-prop_DCAF4
PAC11
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_HPS5
Tricorn_2nd
DUF1664
Tricorn_N
DUF489
DUF2730
Motif
Other DBs
NCBI-GeneID:
130428381
NCBI-ProteinID:
XP_056612338
LinkDB
All DBs
Position
9:5361424..5386683
Genome browser
AA seq
607 aa
AA seq
DB search
MTKRTSTNNVLERRRLLMCFIWTIMAASRNFKQSETWKRHIVRQLKHRNMTQMSVFHDII
NSYHSLLEKSKQRAFITKGILGTGTSPCRRSSEDSLESLKTTTGELAYQVVELQQRIQIK
EATLDEQHTTLNEVQIHLSDVTSKHSTLQDRVAEVQEANRLLKQSYDTLLEKHRLMDSTY
RNEKSRSLDILEHMIRPKQQAAVRMNHRNEKRVRAKEASLHKELQMAACKKVNVDEESGN
MSPSLPSPECETSERLQGSHRPLLRSASATSPRFINSLKGLFERKIRGRSVCSSDEDHFI
PKGVCLAARVPTKAIYTLDAHELGINAVRFSTRSNLLATGGTDRVIKLWDIEAGTLQNRG
TLDGSNEGITSIEFDPTGTRILAASYDKSALFWKLDDCVPKVTLTGHSRKVTAARFIYRQ
NQVVTGSADRTVKIWDLQRAACIQTIDVLSFCSDVVCSEYLIISSHYDRKIRFWDSRAAT
CTQEVALQGRVTSLDLCPDHRQLLSCSRDNSLQLLDLRNSNDRVLFRAEGFKCGSDSTKA
IFSPDGSYLAAGSADGAVYIWSVNSGMLEKRLPDMHSASISAVAWSLSGEHVVSVDTSRR
AVLWRDV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcggacgtctacgaataatgtgttagaaaggcgacgattgttaatgtgtttt
atctggacgatcatggctgcgtcgagaaactttaaacagagcgaaacctggaagcgtcac
attgtcagacagctgaaacatcgaaacatgacacaaatgagtgtttttcacgatattata
aactcatatcacagtctgctggagaagtccaaacaaagagcttttataaccaaaggaatt
ctgggaacagggacaagtccatgcaggcgctcctctgaggattctttggagtctctaaaa
accaccaccggtgagcttgcataccaagtggtggaactgcagcagagaattcagataaag
gaagcgacacttgatgaacaacataccacgctgaatgaggttcagattcatctcagtgat
gtgacatccaaacacagcactcttcaggatcgtgtggcagaggtgcaggaagcgaaccgt
ctcctgaaacagagctatgacacgctgctggagaagcaccggctcatggacagtacctat
aggaatgaaaagagccgcagtttggatatcctggagcacatgattcgacccaaacagcag
gctgctgtgcgcatgaaccatcgtaatgagaagagagtgagggccaaagaagccagtcta
cacaaagagcttcagatggctgcctgtaagaaagtcaatgttgatgaagagtcaggaaat
atgtcaccctcattaccatcaccagaatgtgagacttcagagaggttgcaaggatcccat
agaccacttttaaggtctgcttcagctacatccccccgtttcatcaactctctcaaaggt
ctttttgagagaaagatcagaggaagatcagtgtgcagttcagatgaagatcattttata
ccaaaaggtgtctgtctggctgccagagtcccgactaaggcaatctatacactggacgct
cacgagctgggaatcaacgctgtgaggttcagcaccagatcaaacctgctggctacaggc
ggcactgacagagttatcaaactatgggacattgaagcaggaactcttcagaacagagga
acattagatggaagtaatgaaggcatcaccagcattgaattcgaccctacgggcactcgg
attttagctgcgtcatatgacaagtcagctctattctggaagctggatgactgcgttccc
aaggttacattgacaggtcattctcgtaaagtgacagcagccagatttatttacagacag
aatcaggtggtgacgggcagcgccgatcgaactgtgaagatctgggacctccagcgagca
gcgtgcatccagaccattgatgtgttatccttctgtagtgatgtcgtgtgctcagagtac
cttatcatcagcagccattatgacagaaagatacgcttctgggacagcagggcagcgact
tgcacacaggaagtggctcttcagggcagggtgacatcactggacctctgcccagatcac
aggcagttgctcagctgctccagagataacagcctacagctgcttgacctgagaaacagc
aacgacagggtgcttttcagggcggagggcttcaaatgtggaagcgacagcaccaaggcc
atcttcagtccggatgggagttatctagcagccggctctgcagacggtgctgtgtacata
tggagtgtgaactctggaatgctggagaaacggcttcctgacatgcacagtgcttcaata
agtgccgtggcctggtcgctgtcaggcgaacatgtcgtaagcgtggacacgagccgtcga
gctgttctgtggcgtgacgtctga
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