Triplophysa dalaica: 130428509
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Entry
130428509 CDS
T09616
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130428509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130428509
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
130428509
Endosome - Golgi transport
Arf GTPase associated proteins
130428509
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
130428509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_3
PH_8
PH_6
Motif
Other DBs
NCBI-GeneID:
130428509
NCBI-ProteinID:
XP_056612583
LinkDB
All DBs
Position
9:23717179..23763411
Genome browser
AA seq
1536 aa
AA seq
DB search
MSGSSQPVAEWLSVLRLDQYSSAFQEAGLDTLWECQDLTSAELHQMGVALPGHRKRLLGS
IRKRFPTTVGTEEDEEREEGRPVPRERTKFKAASGSDKKDDIIRATLPPVPPRVTSNRPP
VPFTPKSTVTTSDPNMARNATQPPIAPAPREMPIPAERRKPTPAPRPRPEPLSLKGEVRN
SRRKLSPVSPTLSRSSSSSTSSSSSDRFHLYEQCSLAAQGELAPPLPPKSYAVGVSIEST
DAQLPPRVPHRPHVPPPRVSVNPGSLSSSSSTADDLLDPDQFPDFPHQIRLQSESPRRAV
PPPALVNELDSVGSSDEYDDKDHNLSRDAQLLDMANKMSLMVPKVMKPRYSSICSDEELL
DDDSECYESIAEKRGSWSEDFGSISSCQNSIYLPVTGHVSVPLPQEDLGSTLTPVIKMGW
LYKNPPQGSLIYQRRWVKLDAEYLRYFDTEKDVYSKRIIPTASITGMVNVGDQKFEVVTH
NRTFLFRAESDAERSEWVTVLKNCTGASRTQAGLDLTFNPSTTSEMRGYLELRGLRSKLY
TVVCGDKVYLYKNTEDYRLGIGITSIDMNVGNVKEVDRRAFDLTTPYRIFSFISDTEQLK
EQWVEAMRDSIAEALSNFEVAEQLWSLPANQICADCGTAKPEWAAINLCVVFCKRCAGEH
RGLGPSISKVRSLKMDKKVWTEDLIQLFLALGNERANQFWAANVPPSEALAVDSSSEERR
RFITAKYREGKYRRYHPLFGNQRELNNALCINVQSNDVCETLALVFCGADVNCDTGDPDL
PSPVTLAQYHGQNPQVELLTQNRNTELPRSEVEVAIDTVHYMAPPSITHNGFLFKTASMA
RPITEKKSKEEFSRRWCVLNDGHFSYYESDKNATPNGGLKMREIVCLAVNPAEAHGFDCT
FELYSDSERLYLFGTDNPEAAHEWVKSIARSFIPVAAEVLLLKDFERIGRLRYKDGLNLE
TSRLGWFCLVGSSLHICLEEHNRDETIDLQKLLELSIQPENDVLVLVERGRTLYIEGERK
LDFQGWASAIQRAAGSSGDTLSLQQLTEADIPVIVERCIHFTTQYGLISEGIYRKSGVNS
RIAALLEDFRRDARCVWLKEGEHQVDDVSNVLKRFFRDIEEGLFGQQSHNWLTTTAISDE
SSRMSQYHVLFSNLPRVNQATLRALVNHLYCVQRFSDLNQMNLHNLAIVFGPTLFQTDGK
DYNAGRVIEDLIQHYVTIFDVNEQQLKRQLDEITYIIKLRENLNPKAGPASGDFICTVYL
EEKKETAEQHVKIPATMTAAELTFEILDRRKISVREKDYWCCFEVHEKEEIERPLHYQER
VLPIVHSLRTDSYLLLKKHFSMEAMLVYLASKVEVSKHGMMKFKEERNLLGLSTGSFHDR
YFILTTASLRLYKDVRNLQKLHNSELQCSNRPEREWSVKCLKVYHGIKKKLRPPTCWGLT
VIYESEKHEKQDRQQWYLCCDTQTEMREWFATFLSIQNGGHVWPTEWLKSRTVSRSTPLD
ARFGNVSLIPLRGSENEMRNSVAAFTADPLALFRDV
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggagttcccagcccgtggcagagtggttgagcgtgctccgtctggaccagtac
tcctctgcatttcaggaggccggactggacacattgtgggaatgtcaggatttgacgtct
gcggaactgcaccagatgggcgtggctcttcctggccacaggaagcggcttctcggcagc
atacgcaagcggtttcctacgacggtgggtacagaggaagatgaggagagagaggaaggc
agacctgttcccagagagaggacaaagttcaaagcagcctcgggatctgacaagaaggac
gacataatccgcgccacactgcctcctgtgcctcctcgggtcacgtccaatcgacctccg
gtgccctttacacctaaatccacggtgacaacctctgaccctaacatggcgaggaacgct
acgcaaccaccaatcgcacctgcgccgagagaaatgcccatccctgccgagcgacgcaaa
cccacccctgccccgaggccacggccagaacccctgtctctgaaaggggaagtgcggaat
agcaggaggaaactatcacccgtgtcacccactctctcccgctcttcatcatcgtccacc
tcctcttcctcatctgatcgcttccacctgtatgaacagtgttccttagctgctcaggga
gaactggctccgcctcttcctcccaagagctatgccgtgggtgtctccatagaatccaca
gatgcccagttgcctcctcgggttcctcacagacctcacgttcctcctccacgagtctct
gtcaatcccggcagcctgtcaagttccagctctacagcagatgatcttctggatccggat
caattcccagattttccccatcagatcagacttcagagcgagagcccgaggagagcagtg
ccaccgccagcgctcgtcaacgaattggattcagtgggcagttcagatgaatatgacgat
aaggatcacaatctcagcagggacgctcaactcttagatatggccaacaagatgtccttg
atggttcccaaggtgatgaaacctcgatacagcagcatctgcagtgatgaggagcttctg
gatgatgatagcgaatgttatgaatctatagcagaaaaacgaggatcatggagtgaagat
tttggttcgatctccagttgtcagaacagcatctacctgccagtcacaggtcatgttagt
gttccgctccctcaagaggacttgggctctactctcacccctgtcattaaaatgggctgg
ctctacaagaatcctcctcaggggtctctcatctaccagcgccgttgggtcaaactggat
gctgaatacctgagatactttgatactgagaaggacgtttactcaaagaggatcatacca
actgcctccatcacagggatggtcaacgtgggcgatcagaagtttgaagtcgtgacacac
aatcgcacttttctgttccgagccgagagtgacgcagagagaagcgagtgggtgaccgtg
ttgaagaattgtactggagcatctcggacacaagcaggtctggatttgacctttaacccc
agtacgacctctgagatgagaggttatctggagctgcgtggtctgcgctctaaactctac
actgtggtgtgtggagataaagtctatctctacaagaacactgaggattatcgtctggga
ataggaatcacttctattgatatgaacgttgggaatgtgaaggaagtggacagaagagcg
ttcgatctgaccacaccgtaccgcatattcagtttcatatcagatacagagcagttaaag
gagcagtgggtggaggcgatgcgggactcgatcgcagaagcgttgtctaactttgaagtt
gctgagcaactctggtcattgccagccaatcagatctgtgcggactgcggcacggccaag
cctgagtgggcggccatcaacctgtgtgtggttttctgtaaacgttgtgcaggtgaacat
cgtgggctcggtccgagcatatctaaagtacggagtctcaaaatggacaagaaggtttgg
actgaagatctgattcagttgttcctcgcgctaggaaatgagcgagccaatcagttttgg
gcagcaaatgtccctcccagtgaggctttagctgtcgacagcagcagtgaagagagacgt
cgcttcatcacggcaaaataccgggaagggaaataccgcagatatcatcccctgttcggt
aaccagagagaactcaacaacgcgctgtgtattaacgttcagtcgaacgatgtgtgtgag
acgctggctctggtgttctgtggcgctgatgtgaactgtgacaccggtgacccggacctg
ccctctcccgtcaccctcgcccagtatcacggccagaacccacaggtggagctcctcacc
cagaaccgcaacacagagctcccgaggtcagaggtggaggtcgccatagatacggtacac
tacatggccccgccctccatcacacacaatggcttcctgtttaagaccgcctccatggct
cgtccgatcacagagaagaagagtaaggaagagttcagtcgtcgctggtgtgtgctgaac
gacggacatttcagctactacgaaagtgacaaaaacgctacgcctaatggaggtctgaag
atgagggagattgtgtgtctggctgtcaatcctgcagaggctcatgggttcgattgcacg
ttcgagctgtactcagattctgaacgcttgtatctcttcggcactgataatcccgaggca
gcacacgagtgggtcaaatccatcgccaggtcgtttattcctgtggccgctgaagttctg
ctgctgaaagactttgagcgcatcggtcggctgcgatataaagacggactcaatctggag
acgtctagactgggctggttctgtctggtgggatccagtctccacatctgtctggaggag
cacaacagagacgagaccatcgacctgcagaagctcctggagctgtcgattcagccagaa
aatgacgtcctggtgctggtggagagaggcaggacgctgtacatcgagggcgagaggaag
ctggatttccagggctgggcctcagcaatccagagagcggccgggagttctggagacacg
ctgagcctccagcagctgacagaagcagatattcccgtcatagtggagcgctgcattcat
ttcaccacacaatacggtctgatctcagaaggaatctaccgcaagagtggggtgaacagt
aggatcgccgccctgctggaggatttcagacgtgacgccaggtgtgtgtggctgaaggag
ggcgaacatcaggtggatgatgtctccaacgtcctcaagaggttcttcagagacatcgag
gagggattgtttggacagcagtcgcacaactggcttaccactacagcaatttcagacgag
agcagcaggatgtcacagtatcatgttctgttcagtaatctgccgagagtgaatcaagcg
acactacgagctctagtgaatcatttatactgtgtccagcggttctcggatctcaatcaa
atgaaccttcataatctggccatcgtgttcgggccgacactcttccagacggacgggaag
gactacaacgccggccgtgtcatcgaagatctcatccaacactacgtcaccatatttgat
gtgaatgaacagcagctgaagaggcagttagatgaaatcacatacatcattaaactgaga
gagaacctcaaccctaaagcaggacccgccagcggtgattttatttgtacagtttacctg
gaggagaagaaggagacggctgagcagcatgtgaagattcccgccactatgacggcagca
gaactgacgtttgagattctggacagacggaagatcagcgtgagagagaaggactactgg
tgctgttttgaggtccatgagaaagaggagatagagcggccactgcactatcaagagaga
gttctgcccatcgttcattctctgaggacagacagctacctgctgctgaagaaacacttc
tcgatggaagccatgctcgtctacctggccagtaaagtggaggtgtctaaacacggtatg
atgaagtttaaagaggagaggaatctactgggtctgagcaccggaagctttcatgatcga
tacttcatcctcaccaccgcatcgctcagactctataaagacgtgcggaatctacaaaag
ctacacaattcagagctgcagtgtagtaatcgtccagagagggagtggtcagtcaagtgt
ctgaaggtctatcatggcattaaaaagaagctccgcccccctacatgttggggtctgaca
gtgatctatgaaagtgagaaacatgagaagcaggacagacagcagtggtatctctgctgt
gatacacagactgagatgagagaatggttcgccacattcctgagcatacagaacggaggt
cacgtgtggccgaccgagtggttgaaatcccgcacagtgagtcgctccacgcctctggac
gctcgtttcggtaacgtgtctctgattcctctgcgcggcagtgagaacgagatgaggaat
agtgtcgccgctttcacagccgatcctctcgctctctttagagatgtttga
DBGET
integrated database retrieval system
