Triplophysa dalaica: 130428544
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Entry
130428544 CDS
T09616
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03040
Spliceosome
tdw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130428544 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130428544 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130428544 (srsf1a)
Spliceosome [BR:
tdw03041
]
Common components
Common spliceosomal components
SR proteins
130428544 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
130428544
NCBI-ProteinID:
XP_056612644
LinkDB
All DBs
Position
9:complement(10009512..10014533)
Genome browser
AA seq
274 aa
AA seq
DB search
MSGGGVIRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGGGGGSERGGGGGGGGGGGGGG
GGGGGGGGFGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFR
DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSR
SRSRSNNRSRSYSPRRSRGSPQYSPRHSRSRSRS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggtggtgtgatccgcggccctgctgggagcaatgactgccgcatttatgtg
gggaatttgcctcctgatatccgcactaaagatgtcgaagacgtgttttacaagtatggg
gctattcgcgatatcgatctaaaaaacagacgaggtggacctccatttgcctttgtcgag
tttgaagaccccagggatgcagaagatgccgtttatgctcgggatggctatgactatgat
ggttatcggcttcgagtggagttccccaggagtggacggggtatggggagaggaggtgga
ggtggcggcagcgaaagaggaggaggtggtggcggcggaggaggaggaggaggaggaggc
ggcggaggaggaggtggtggtggttttggaggtggtgctccaaggggtagatacggaccc
ccatccagacgttctgagtacagagtaatagtttcaggtcttccaccaagcggtagctgg
caggacttgaaggatcacatgcgtgaagcaggtgatgtatgttatgctgacgttttccga
gatggaactggcgtggtggagtttgttcgtaaagaagacatgacctacgctgttcgaaaa
ctggataacacaaaattccgatcgcatgagggagaaactgcatacattcgtgtgaaggtg
gatggtcctcgcagtccaagctatggaagatcaaggtccagaagtcgcagtcgcagcagg
agtcgcagccgcagcaacaaccgtagccgtagctactccccacggcgcagccgaggatcc
ccgcagtactctcctcgccatagccgttctcggtctcgatcctaa
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