Triplophysa dalaica: 130428548
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Entry
130428548 CDS
T09616
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130428548
Cell adhesion molecules [BR:
tdw04515
]
Immunoglobulin superfamily
DSCAM family
130428548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_5
V-set_CD47
Ig_6
Receptor_2B4
Sp38
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
130428548
NCBI-ProteinID:
XP_056612651
LinkDB
All DBs
Position
9:complement(8355847..8471033)
Genome browser
AA seq
2151 aa
AA seq
DB search
MTVPRRGGYERRVQSFPRFSALASPGLGLERSPGSIVTTPARSLAWPNTAQCTRRDCKTF
LRNIPAIYGMWLVTLLLLYSFQEVHSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGG
APHAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENQAGK
IRSPSIHVKAVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPG
NRFFLTSFGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVLDPTESTPSVMDS
FQSGEVQVGRSIELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTISDLRLEDSGN
YICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWFRN
TEPIVPDQHFSIQGIHNETLFITAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIV
SSFSERVVAPGEPFSLMCAAKGAPPPTITWTLDDEPVARDSAHRASQYTLSDGSTVSHVN
VTNPQIRDGGVYRCAARNSAGSAEYQARINVRGPPSIRAMRNITAVAGRNTFINCRVIGY
PYYSIKWYKDGMLLPDNHRQVVYENGTLKLSDVQKGMDEGAYLCSVLIQPQLSISQTVYV
TVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVSGTSGVTIETKEF
MSSLQISKVSLKHNGNYTCIASNDAATVSSERQLIVTVPPRFRVQPNNQDGIYGKSEVLN
CSVEGYPPPKVVWKHAKGIGNPQQYHPVPLTGRIQILSNGSLLIRHMLEEDRGYYLCQAS
NGVGSDISKSMMLTVKIPAMITSHPNTTMAIKGQNKELNCTARGEYPIIIRWERGDTVID
PDRNPRYSITTSPNEKSDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPP
DPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKSDPWELKHATRKISPTNNQAN
IVELHPASVYSIRMYSYNKIGRSQASKELTISTEEAPPDGPPMDVILQAMTSQSIRVTWK
APKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA
FNRAGTGPSSSEINATTLEDVPSQPPQNVRAITVTSDEAVITWSEPPRMTLNGVLKGYRV
VFWSLYPDGGGCCGGQTLGFNQKWGEMQNITTTREQVELKGLEKFTNYSVQVLAYTQAGD
GVRSNVLYIQTREDHPGPPAGIKAVPSSASSVVVSWLPPIKPNGIIRKYTIYCSSPGSGQ
PAPSEYEANPELLIYRITHLTRGQQYLIWAAAVTTAGRGNISEKVTVEPASKAPAKILSF
GGTVTTPWMKEVRLPCSSVGEPTPTIKWTKDSEDTAIPVTQDGHRNILSNGTLVLRSVKA
EDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRG
FVLQYSVDNTEEWKDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTH
GREPQFNKDQPIFTHINSTHARLNLQGWTSGGCPITAVLLDFRPKGTWAWQSVRTNASAD
IFLAELREATWYELKMKACNSAGCGNQSSQFATLDYDGSTIPPIKSARGEGDDVKKLFSI
GCPVILVTLGMALLFIIRRKRKEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKGPPQGPR
LHIDIPRVQLLIEDKEGIKQIGEDKATIPVTDTEFSQSVNPQSFCTGVSVHHPALIQNTG
PLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHG
ITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITEC
FISDSSSDQMTTGTNDNADSMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAN
KSEYCNLPLYMKTDPFFRKQAELHDPCPVVPPREASIRSLAARAYHTQGRHMTLDPSKQQ
ALTLGHGGLSSLTSSGASGTSGPASIGAAGSSSICSGTATLPQRTLTMPSSSSTSLVASG
AAAAGASASGPTPGSSKVGGSRDSLLESSSSGLGRLQKQNAGAYSKSYTLV
NT seq
6456 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccgcggaggggagggtacgagaggcgggtccaaagctttccgcgcttctcg
gcgctggcgagtccgggactagggctggagagatcgccggggagcatcgtcaccactcct
gcacggagcctcgcctggccgaatactgcacagtgcacacgtcgggattgcaaaacattc
ctgagaaatatacctgctatttatggcatgtggctggtaactttactcctgctgtattct
tttcaagaagtgcacagcgaggatgtggtctcgacgcggctgtactttgtgaatgcttcc
ctgcagagagtgaccttctccagctcagtgggggtgtccctgccctgtcctgcgggtggc
gccccccatgccgtcctccgttggtacctggccaccggcgacgacatctacgacgtgcca
cacatccgtcacgttcacgctaacggcacgctgcagctctaccccttctccccctccgcc
ttcaacagcttcattcatgacaatgactacttctgcactgctgagaaccaggccgggaag
atccgcagccccagcatccatgtcaaagcagtgtttagggagccctacacggttcgcgtg
gcggaccagaggtccatgcggggcaacgtggccgtcttcaagtgcctcatcccctctgct
gtacaagagtacgtcagtgtggtgtcctgggagaaggacactgtctccattgtcccaggt
aacaggttcttcctgacgtcatttggtgccctctacatatctgacgttcagaaagaggac
gctctctccacctaccgctgcattaccaagcacaaatacagcggagaaaccaggcagagc
aacggggctcgtctgtctgtgctagaccccactgaatctacgccctctgtgatggacagt
ttccagtcaggggaggtgcaggtgggccgcagcattgagttgccctgcatcgcctccggt
taccccaacccaaccatccgctggctgaaagacgggcgaccgctacccgctgactcccgc
tggacgcggcgtctgaccgggctcacaatcagcgaccttcgcctggaagactccggaaac
tacatctgtgaagtcaccaacagcttcggctccaaagaggtcacgggacaccttaacgtc
atagagcctcttcgagtcacgctgtctccaaagaacctgaagacgggcattagcagcaca
gtgattctgtcctgtgccgtgcagggctcgccccacttcactgtttcctggttccgcaac
acagaacccattgtgcctgaccagcacttctccatccagggaatccacaacgagacgctc
tttatcacagcggctcagaagagacactcaggggcgtatcagtgtttcgccacccgcaag
ggtcagaccgcccaagacttctccatcatactgttggaggacggcaccccacggatcgtc
tcgtccttcagcgagcgagtggtagctcccggcgagcccttctctctcatgtgcgcggcc
aaaggcgctcctccccccaccatcacctggacgctagacgacgagccggtagcgcgggac
tcggcgcaccgggccagccagtacacgctctccgacggctccactgtctcgcacgtcaac
gtcaccaacccgcagatccgcgacgggggcgtgtaccgctgcgccgcacgcaactcggcc
ggtagcgccgagtaccaagcgcgcataaacgtaagaggtcctcccagcatccgggccatg
aggaacatcacagccgtggccggtcgtaacacctttattaactgccgcgtgatcggctat
ccatattactctatcaagtggtataaagatgggatgttgttgccagacaaccatcgtcag
gtcgtgtacgaaaatgggactctgaagctgagcgatgtgcagaagggtatggatgagggg
gcgtatctgtgcagcgtgctcatccaaccacagctgtccatcagccaaacagtctacgtc
actgttaaagttcctccgctcatccagcccttcgacttcccgcccacctccatcggcaag
ctgatgtacatagcgtgtgtggtgtcatctggagacatgcccatccgcatcacctggcga
aaggatgggcaggagatcgtgtcggggacgtccggggtcaccatcgagaccaaggaattc
atgagctccctacagatatccaaagtatcactaaagcataacggaaactacacttgcatc
gcaagcaatgacgccgccactgtcagttcagagagacagctcatagtaacagttcctcct
cgttttcgggtccaaccaaataatcaggatgggatctatggaaagtccgaagttcttaac
tgttctgtggaaggctaccccccacccaaagtcgtctggaagcacgccaaaggtatcggg
aacccccagcagtaccacccggtgccccttacaggccgcatccagatcctgtccaacggt
tctctgttgatacgtcacatgctggaggaggatcgggggtattacctgtgtcaggccagc
aatggagtgggctctgacatcagcaaaagcatgatgctgaccgtaaaaattcctgccatg
atcacatcccaccctaacaccaccatggctataaagggtcaaaacaaggagttaaactgt
actgcccggggcgagtatcccatcatcatccgctgggagcggggtgacaccgtcatcgac
ccagaccgcaaccctcgctactccatcaccaccagccccaatgagaagagcgatgaagtc
atctccacactgaagctaaagccggctgaacggggggactctgtctttttctcctgccac
gccatcaactcctacggcgagggccgcggactcatccagttgactgtgcaagaaccccct
gatcctccggagctggaggttcgagaggtcaaagatcgcagcatgaacctgaggtggacc
cagcggttcgacggcaacagcatcatcaccagctacgacatcgagtacaagaataaatct
gacccgtgggagctaaagcacgccacccgcaagatctcgcccaccaacaaccaggccaac
attgttgagctccacccggcgtccgtgtacagcatccgcatgtattcctacaataagatt
ggccggagccaagccagcaaagagctgaccatcagcacagaggaagcacctcctgatggg
ccacccatggatgtgatcctacaagcaatgacctctcagagcattcgtgttacttggaag
gctcctaagaaggagcttcaaaacggagttatccgtggctatcagatcggttacagggag
aatggtccaggcagtaatggtcagtacagcatagtggaaatgaaagccacgggagacagc
gaagtttacaccctggataacttaaagaagtttgctcaatatggagtggtggtccaggcg
ttcaaccgggccggaacgggaccctcgagttcagagatcaacgccactacccttgaagat
gttcccagccagccaccacagaacgtgcgggccatcacggttacttcggatgaggcggtg
atcacgtggtccgagcccccgcgaatgaccctgaatggggtactgaagggctaccgtgtg
gtgttctggtccctctaccccgatggaggtgggtgctgtgggggccagacactggggttc
aaccagaaatggggcgagatgcagaacatcaccaccactcgtgagcaggtggagctgaag
ggtctggaaaagttcaccaactacagcgttcaggttctggcctacacacaggcgggagac
ggtgtccgcagtaacgtcctgtacatacagacgcgagaagaccatcccggccctccagcg
ggcatcaaagcagtgccatcctctgccagcagtgtggtggtatcctggctcccccctatc
aaacccaatggtatcatccgcaaatacacaatctactgctccagccctggatcgggccaa
ccggcaccaagcgaatatgaagccaaccctgagctgctgatataccgcatcacccacctg
actcggggtcagcagtacctcatctgggcggctgccgtcaccactgccggaagaggaaac
atcagcgagaaggtcaccgtggagcctgcaagtaaagctcctgctaaaatcctgtccttc
ggtgggacggtgaccactccatggatgaaagaagtccggctgccatgcagctcggtggga
gaaccgacacccaccatcaaatggaccaaagacagtgaggacactgccatcccggtcact
caggacggtcaccgtaatattctttccaatggtaccctggtgttgcgctctgtcaaagca
gaggattctgggtactacacctgcacggccacaaacacgctgggatttgacaccatcatt
gtgaacctgttggtgcaagtgcctccagatcaacctcgcttgacggtctccaccacctca
acatcttcgatcactctggcctggataccaggagacaacggaggaagctctataagaggt
ttcgtgctgcagtattcagtagataacaccgaagaatggaaagatgtcttcatcagctcc
agcgagcgatcctttaagttagacaacctgaggtgtggtacctggtacaaagtcaaactg
gcagctaaaaacagcgtgggagctggccgcattagtgagatcatcgaagcaaagactcat
ggcagagagccgcagttcaataaagaccagcctattttcactcacatcaactccacccac
gcccgcctcaacctgcagggctggacgagcggtggctgtcccatcactgctgtcctgctc
gattttcggcccaaaggcacctgggcctggcagagcgtgcgcaccaatgcttcggccgac
atcttcctggccgagctgcgggaggccacctggtacgagcttaagatgaaggcgtgcaac
agcgccggctgcggcaaccagagctcccagtttgccacgctggattacgacggcagcact
attcctcctattaagtcagcgagaggggaaggagacgatgttaaaaagcttttctctatt
ggttgccctgtcattctggtcactcttggcatggctttactcttcatcatccgcaggaaa
cgtaaggaaaagagactcaaacgattaagagatgctaagagcttggctgagatgcttatc
agcagtaagaacaatcgaagttttgacaccccagtgaaaggcccacctcagggaccccgg
ctgcatatagatatcccccgcgtgcaactgctcatcgaggacaaagagggaattaaacag
ataggtgaagacaaagccaccattcctgtgacagacactgagtttagccaatcagtgaac
ccgcagagcttctgcacgggtgtgtcagtgcatcaccccgcccttattcagaacaccggc
cctctgattgacatgtcagacatcagacctggaaccaatccagtttcaagaaagagtgtg
aagtccgcacacagcacaagaaaccggtactccagtcagtggactctgaccaaatgccag
gcgtccacaccggctcgaactcttacctcagattggcggactgtgggctctcagcatggc
ataacggttactgagagtgacagctacagcgccagcctgtcacaggacacagataaagga
cgtaacagcatggtgtccaccgagagtgcttcctccacgtatgaggagttggcccgagca
tacgagcacgctaagctagaggagcacctccagcacgccaagttcgagatcaccgagtgc
ttcatctcagacagctcgtctgatcagatgaccaccggcaccaacgacaacgccgacagt
atgacctccatgagcacaccgtctgaaccgggcatctgccgctttactgcctccccgcct
aaaccgcaggactatgaccgcggcaagaacgtggcagtgcccattccacaccgcgccaac
aagagtgagtactgtaacctccccctgtacatgaagacggaccctttcttccggaagcag
gccgagctgcacgacccctgccctgttgttccgccccgtgaggcttccatcaggagcctg
gccgcccgggcctaccacacgcagggccgccacatgacattggacccctccaagcagcag
gccctaacgctgggccacggaggcttgagcagcctgaccagctccggagcctccggtaca
tcaggcccggcctcaatcggggccgctgggagctccagcatctgctcaggcacggccacc
ttgccccagaggactctcaccatgcccagcagctcttccacctccttggtcgcgagcggg
gcggccgccgcaggtgcgtcagcgagcggtccgacgcccggcagttccaaggtcggagga
tccagggactctctgctagagagcagctcatccggcctgggcagactgcaaaagcagaat
gctggggcgtactccaaatcctacacgctggtgtag
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