Triplophysa dalaica: 130428591
Help
Entry
130428591 CDS
T09616
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130428591 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tdw01007
]
130428591 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdw03016
]
130428591 (farsb)
Enzymes [BR:
tdw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
130428591 (farsb)
Amino acid related enzymes [BR:
tdw01007
]
Aminoacyl-tRNA synthetase
Class II (U)
130428591 (farsb)
Transfer RNA biogenesis [BR:
tdw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130428591 (farsb)
Prokaryotic type
130428591 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
DUF383
Motif
Other DBs
NCBI-GeneID:
130428591
NCBI-ProteinID:
XP_056612727
LinkDB
All DBs
Position
9:complement(21249218..21255139)
Genome browser
AA seq
590 aa
AA seq
DB search
MPTVSVKRDLLFEALGKTYTDEEFDELCFEFGLELDEITSEKDIISREQGDQKAEGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKEKIEAPRYRRVSPANGGEPQRLVITEETASVR
PHAVAAVLRNITFNQERYESFIELQEKLHQNICRKRTLVAIGTHDLDTISGPFTYTAKPP
GEIRFKPLNQSKEYTATELMSFYKTDSHLRHYLHIIENEPLYPIIYDSNGIVLSMPPIIN
GDHSKISLNTKNIFIECTAMDLTKAKIVLDMVVTMFSEYCEEPFTVEEAEVVCPDGRSCL
YPELAYRTETLSADFINKQVGINESAESVAQLLTKMCLRSEVSGEDDRIQVEIPPTRSDV
IHACDIMEDAAISYGFNNIVRTTPRTYTVANQLPLNKLTELLRQDLAAAGFTEALTFALC
SEEDIADKLGKNIAETRAVHISNPKTAEFQVARTTLLAGLLKTVAANRKMPLPLKLFEIS
DVVLKDETRDVGARNNRRLSAVYYNKSPGFEVIHGLLDRVMQLLDVKPGRNHGYHIQAAE
DSTFFPGRCAEIFSCGKSIGHLGVLHPDVINRFELTMPCSAIDIDIEPFL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagagagatctgctctttgaagccctggggaaaacatacacc
gatgaagagtttgatgaactatgtttcgagtttggactcgagctggacgagatcacgtca
gagaaggatatcataagccgagaacagggcgatcagaaggcagagggagcgtctgatgtt
gttctgtataagatcgacgtaccagccaaccgctatgatctgctgtgtctggagggtctg
gtcaggggtctgcaggtcttcaaagagaagattgaagctccccggtacaggcgagttagt
cccgccaatgggggagagcctcagcgtctggtcataacggaggagacggcatctgtgagg
ccacacgcggtagcagctgtcctgcgcaacatcacgttcaatcaggagcgatacgagagc
ttcatagagctgcaggagaaacttcaccagaacatctgcaggaagagaactctggttgcc
ataggaacacatgatttggataccatctccggtccattcacctacaccgccaaaccgccc
ggagagatccgcttcaaaccgctcaatcagagcaaagagtacaccgccacagaactcatg
agtttctataagaccgacagtcatttgagacactacctgcacatcatagagaacgagcct
ctgtatcccatcatatacgacagcaacggaatcgtcctatcaatgcctcccattattaac
ggagaccacagcaagatttcattaaacacgaagaacatttttattgagtgcacagctatg
gacctaacaaaggcaaagattgtgctggatatggtagtgaccatgtttagtgagtactgt
gaggagccgttcacggtggaggaagcagaggttgtttgtccagatggaagatcatgtttg
tatcctgagctggcttacaggacagagacgctctctgcagacttcatcaacaaacaagtc
gggatcaacgagtcagctgaaagtgtagctcagctcctgaccaagatgtgtttgaggtca
gaggtcagcggtgaggacgatcggatccaggttgagatcccacccacacgctctgatgtc
atccacgcctgtgacataatggaggacgctgccatttcttatggctttaacaacattgtc
aggaccacgccccgtacttacacagtagccaatcagctccctctgaataaattgacagag
ttattaagacaagaccttgcagctgctggatttaccgaagctttaacgttcgctttgtgt
tcagaagaagatattgctgataaacttgggaaaaacattgcagaaacgcgagcagttcac
atctcaaacccaaagactgcagagtttcaggtggcacgcacaacccttctggcgggtctc
ttgaaaacggtcgctgccaacaggaagatgccccttcctctcaaactgtttgagatttca
gatgtcgtccttaaagacgaaactcgagatgtaggagcacgtaacaaccggcgactgtct
gccgtgtactacaacaaaagcccgggtttcgaagtcatccacggacttcttgatcgagtc
atgcagctgctggatgtcaaaccgggccgtaaccacggataccacatccaggctgcagag
gactctacgttcttccccggtcgctgtgctgagatcttttcttgcggcaaaagcatcgga
cacttgggggtccttcaccctgacgtcatcaatcgttttgagctgaccatgccctgctct
gctatcgatatcgacatcgagcccttcctttga
DBGET
integrated database retrieval system
