Triplophysa dalaica: 130428848
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Entry
130428848 CDS
T09616
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130428848 (ctr9)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
130428848 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_16
TPR_12
TPR_10
TPR_17
TPR_11
TPR_7
TPR_6
TPR_Slam
ANAPC3
ARM_TT21_4th
TPPII_C
TPR_EMC2
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
130428848
NCBI-ProteinID:
XP_056613108
LinkDB
All DBs
Position
1:6621467..6631022
Genome browser
AA seq
1169 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDTKKDLINQSTLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFQFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNCNCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASPTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKEHLKKVTVQYSDDVEAWIEVAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNVLREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATAEMSDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARSLFKCGKLQECKQTLLRARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
HRAKQEQERDQLRQQMVREQEERRNRVAVEQKKLLEQRAQFVEKTKNLLNFSEGMKDSAR
EKKKGGSGRRKKGGDFDDFVNDDSDEDLPLKKKKKKKVGSGSEMEDEGEDGEKKSRKRRK
RPFQREDDGSDQEGTSRPKKQRKPKERKRIEKPERMPSSLKGKIKSKAIISSSDSSSDED
GLKIAEDRNPKDSGSGSDDNEGHRKRIASDSDSNVERNQSASEAGSPQRSGNSDDSGSER
PVKRRRPQQQSDSEQSDNQSRKSRSEGSDDESPAGSPAGSPAGSPAGSPAAASDQGSDNE
GSPQRSENESEQEGSNNEASNRGSDDDSD
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagggtccattgaaatccctctacgggacacggatgaggttatcgaacttgat
tttgatcagcttcccgaaggagatgaggtcatcagtattctcaaacaggagcacacacag
ttgcacatatggatcgcacttgccttggagtactacaaacaaggaaagacagaagatttt
gtcaagttgctggaggcggcacgtatcgatggaaacctcgattacagagaccatgagaaa
gaccaaatgacttgtctggacactctcgcggcctactatgtccaacaggctcggaaagag
aagaacaaagataccaagaaggaccttatcaaccagtccactcttctgtacaccatggca
gacaagatcatcatgtatgatcagaaccatctgctgggcagagcttgcttttgtctcctg
gaaggggataaaatggaccaggcggatgctcagtttcaattcgttcttaaccagtcaaca
aacaacattcctgcacttctgggtaaggcgtgtatttccttcaacaaaaaggattacagg
ggagctctggcatactacaagaaagctcttcgcaccaatcccggctgtccagccgaggtg
aggcttggcatgggccactgctttgtcaagctcaacaaactggagaaagctcgcttggct
ttcggcagagccctggagctgaactgtaattgcgtgggggctttggtgggtttggctgtt
ctggagctgaacaacaaagaggccgactccatcaaaaacggagttcagctgctttccagg
gcgtacaccattgaccctagcaaccccatggtgctcaatcacctcgccaaccatttcttc
ttcaaaaaggactatagcaaagtgcagcatctggctctgcacgcttttcacaacacggaa
gtggaagccatgcaggccgagagctgctatcagttagcccggtccttccacgtccaggag
gattatgaccaagctttccagtactactaccaagccactcagtttgcatcacccaccttt
gttctgcccttcttcggcctgggccagatgtatgtataccgtcgggacaaagagaacgct
gcacagtgctttgaaaaggtcctcaaggcttatccaaataactatgaaaccatgaaaatc
ctggggtcactttatgccacctcggacgatcaggagaagcgagacattgctaaggaacat
ctgaaaaaagtcactgtgcagtattcggatgatgtggaagcgtggattgaagttgcccag
attttggaacaaacagacattcagggagctctgtctgcatacggcactgccactcgcatc
ctccaggagaaggtccaggccgatgtgccccctgagatccttaacaatttgggggctttg
cactttcgtttgggaaatcttggagaggccaaaaaatacttcttggcatctttggagagg
gcgaaagccgagggcgaacatgacgaacactattacaacgccatctccgtcaccacatcc
tataacctggcaagactctatgaggccatgtgcgagttccatgaggccgagaagctttac
aagaacgtcctgagagagcatcccaactatgtcgactgttacttacggcttggcgcaatg
gcacgtgacaaaggaaatttctatgaggcctctgattggtttaaagaagctcttcagatc
aatcaggaccaccccgatgcctggtcgttgattggtaacctccatctggccaaacaggag
tgggggcccggccaaaagaagtttgaacgtatcctaaagcagccttcaacccagaacgac
acctactctatgctggcgcttggcaacgtgtggcttcaaacgctgcaccagcccaccaga
gatcgagaaaaggaaaagcggcaccaggatcgagctcttgccatctacaaacaagttctg
aggaatgatgccaaaaatctatatgctgccaacggcataggtgctgtgttggcacacaag
ggatatttcagagaagcgagagacgtctttgcccaggttagagaagctacagcagagatg
tctgacgtgtggttgaacctcgcacacatctacgtggaacagaagcagtacatcagtgcc
gtgcagatgtatgagaactgcctgaagaagttctacaaacatcagaacacagaggtgctg
ttgtatctggcccgttcgctcttcaaatgtggcaaactgcaagagtgtaaacagacactt
ctgagggctcggcatgtggctcccagtgacacggtgctgatgtttaacgttgcgctggtg
cttcagaggttggccacacttgttctgaaggatgagaagagtaacttaaaggctgtactg
agtgcagtgaaagagctggagctggctcacaggtacttcagctatctcagtaaggccgga
gacaaaatgagattcgatctagcgctggctgcaagtgaagccaggcagtgttctgatctg
ctaagccaggctcagtaccacgtcgcccgagctcgtaaacaggacgaggaggagaaggag
catcgtgccaaacaggagcaggagagggatcagctgcggcagcagatggtgcgagagcaa
gaggagaggaggaaccgggtggctgtggagcaaaagaaactcctggagcagagagcacag
tttgtagagaagaccaagaacctcctcaacttctcagagggaatgaaagactcggctagg
gagaagaagaagggaggcagtggacggcgcaagaaaggaggcgactttgatgactttgtc
aatgacgactctgatgaggatctcccccttaagaagaagaaaaagaagaaagttgggagc
ggcagtgagatggaggatgaaggagaagatggagagaagaaatctcgcaagagaagaaag
agaccttttcaacgggaggatgacggttcagatcaagaaggcacatcgaggcccaaaaag
caacgcaaacccaaagagcgcaagaggattgagaagcctgagcgcatgccgtcatcgctt
aaaggaaagatcaaatctaaagccatcatttcctcctctgattcctcgtctgatgaggat
ggactgaaaatagcagaagaccgaaaccccaaggacagcggttcaggttcagatgacaat
gaaggccacaggaaacgcatcgcgtccgacagcgattccaatgtggagcgcaaccagtcg
gccagcgaggctggcagccctcagcgctccggaaactctgatgattctgggagcgaacga
cccgttaagaggagaagaccgcaacagcaatccgactcggaacagtcggacaaccagagt
agaaagagccgttctgaagggtcagatgacgaatccccggctggatctccggctggatct
ccggctggatctccggctggctctccagccgctgcatcagatcagggctcggacaatgag
ggctctccgcagaggtctgagaacgaatcggagcaagagggctccaacaatgaagcctcc
aacagaggctcagatgatgatagtgactga
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