Triplophysa dalaica: 130428870
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Entry
130428870 CDS
T09616
Symbol
cul3b
Name
(RefSeq) cullin-3b isoform X1
KO
K03869
cullin 3
Organism
tdw
Triplophysa dalaica
Pathway
tdw04120
Ubiquitin mediated proteolysis
tdw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130428870 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130428870 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130428870 (cul3b)
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130428870 (cul3b)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
130428870 (cul3b)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
130428870 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Stu2_CTS
DUF6655
Motif
Other DBs
NCBI-GeneID:
130428870
NCBI-ProteinID:
XP_056613134
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All DBs
Position
9:22307778..22317029
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AA seq
795 aa
AA seq
DB search
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQTFLAENSASVYIKKVEARI
NEEIERVIHCLDKTTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLTTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFYGPVKKVYTPITSCHTENDDKIRHFYPHPGFFSLQEDG
SDIVGGAQVTGCNARKHILQVSTFQMTILMLFNNREKSTFEEIQQETDIPERELVRALQS
LACGKPTQRVLTKEPKSKEIENGHVFTVNDQFTSRLHRVKIQTVAAKQGESDPERKETRQ
KVDDDRKHEIEAAIVRIMKSRKRMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREY
LARTPEDRKVYTYVA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatctcagcaaaggaggcaccaagaaagacaccaagatgaggatacgagccttt
cctatgaccatggatgaaaagtatgtcaacaacatctgggatctcttgaagaatgccatc
caggagatccagaggaagaacaacagtgggcttagcttcgaggagctctacaggaacgcc
tacactatggtactgcacaaacatggagagaagctctacacgggactgagggaagtggtt
accgaacatctcatcaacaaagtacgagaggatgtgctgaactccctgaataacaacttt
ttgcaaacactgaatcaagcctggaatgaccaccagactgctatggtgatgatcagagac
atcttgatgtacatggaccgagtgtatgtgcagcagaataatgtcgaaaacgtctataac
ctgggtctcatcatctttagagaccaggtggttcgttacggttgcatccgggaccatctt
agacagactttactagacatgatcgcccgtgagaggaaaggcgaggtagtggacagggga
gccatccgtaacgcttgtcagatgttgatgattttgggcttggaagggcgttcggtttat
gaagaggactttgaggccccattcttagaaatgtctgccgagttcttccagatggagagt
cagacgtttttagcggagaacagtgcgagcgtgtacataaaaaaagtggaggcgcggata
aacgaggagatcgaacgagtgattcactgcctggataaaaccacagaggagccgatcgtg
aaggtggtggagagagagctcatctctaagcacatgaagaccatcgtagagatggaaaac
tccggcctggtgcacatgctcaagaacggaaagacagaagatctggcctgcatgtacaaa
ttgttcagtagggtgccaaacggcctgaagacaatgtgcgaatgtatgagctcttatcta
cgagagcagggaaaagctttggtgtcagaggaaggagaggggaagaacccagtcgattac
atccagggtctcctggatctcaagtcacggttcgatcgctttcttcaagaatcctttaac
aacgaccgcttgttcaagcagactatcgcaggggactttgagtattttctgaacctcaac
tctcgttcacccgagtatctctcgctatttatagatgacaagctaaagaaaggagttaaa
ggactgacagagcaggaggtggagtccatcttggataaggccatggttctgttcaggttt
atgcaagagaaggacgtgtttgagcgctactacaagcagcatcttgcccgaagacttctc
accaacaagagcgtctctgacgactcggagaaaaacatgatctcaaagttaaagacagaa
tgtggctgtcagttcacatccaaactggaaggaatgttcagggacatgagcatatctaac
acgaccatggatgagtttcgccaacaccttacaacaacaggggtgtctttaggtggtgtt
gacctcacagtgagggtcttaacgacaggatactggcccacacagtctgcaactcccaaa
tgtaacattcctccttcaccgagacatgcgttcgaggtcttcagaaggttttatttggcc
aaacacagcggcaggcagctcacattacagcatcacatgggctccgcagacctcaatgcc
acattttatgggccagtcaaaaaggtttatacacctattacgagctgtcacacagaaaat
gatgataaaattagacacttttatcctcatcctggtttcttttctctacaggaggatggg
tcagatattgtgggtggagctcaggttacaggctgtaatgcaaggaaacacattctgcaa
gtttccacattccagatgacaatcctcatgctcttcaacaacagagagaaatcaacattt
gaggaaattcagcaagagacagatatcccagaaagagagcttgtgcgggcgctacagtct
ctggcctgtggaaagccaacgcagcgcgtcctcactaaagagcctaaatcgaaagagatt
gagaatggccatgtgttcactgtcaacgatcagttcacatccagactgcacagagtcaag
attcaaacagttgctgctaaacagggagagtcggatcctgagaggaaggagacacgacag
aaggtggacgatgacagaaaacacgagattgaggcagccattgttcgcatcatgaagtcc
agaaaaaggatgcagcacaatgttctagtagcagaggtcacccagcagctaaaggcacga
tttctcccaagtcctgttgttattaaaaagcgtattgaaggacttatcgagagagaatat
ttggcaagaacaccagaggatcgcaaagtatacacatacgtagcatga
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