Triplophysa dalaica: 130428917
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Entry
130428917 CDS
T09616
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
tdw03015
mRNA surveillance pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130428917 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
130428917 (acin1b)
03015 mRNA surveillance pathway
130428917 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130428917 (acin1b)
03041 Spliceosome [BR:
tdw03041
]
130428917 (acin1b)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130428917 (acin1b)
Spliceosome [BR:
tdw03041
]
Complex C
Other components
EJC/TREX
130428917 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
130428917
NCBI-ProteinID:
XP_056613193
LinkDB
All DBs
Position
1:complement(24404963..24424017)
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AA seq
1273 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKAALEQRGLAKSGQKNALIKRLKGALMLENLQRSSTHH
AGLQPNSQMGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADEIQRPAGPMQDDHML
TSESTSCLPDKHRIVHSHISLSQAEGGDRGGGLPHDPGLMGSHILDMSPSHLPHEAPDTK
AGRNRPPPNFPSLEEVATPSPPRAVASLSVRVVGQPERQGLPLMMPRSQEREGTAPVETG
PAQSVLQLSRSARAAAFVQADGDDEGEDDDSDNDDEWGPSSNAKKSVRAPPVQPPPATVP
QRSRRKLQPPQHIPPQPQPVPQPPLQLRQPTPPPSPPPELSFLLPDTPKQSPHDQDEAVG
PGDGAAPEPGSMPSPPPFKRQDSSSSSRSSSPEPPSTRRPGPLSLLVLKMESEGVFVGGQ
KVGIEGEMEVEEQEGGKPAEAPEVLMGTNVQTVPQNSTQQLNRPHVSVSVPTMPSVQQDT
HHELENKISKTHDEKDEQKRGEEKENEKVNETAAPFHMKASKMFSLKRPHIFSAVPPPES
LKSPSKPEQVSVLNTAPTCSEDVMMETETSTVASQSKHSEENKEVKILEKLSPRAEEESI
MVPSSHSSSDEGEVGKTSDAHKPRSSTSSQSISDSESSSSHSSSSPSHEKSRPHSQKKDK
KTENQKADMKETKTKSPREIKQEGLSEPAGQVTMEQEGRSDSESALQQPDHQEADASDLC
PEKSSPAKLIAARKISLSGKTENAAEPVGGANRKRRWGSSTAVTAKRPSISITTESLKTL
IPEIKPVLEAVVELHPDEGQLSSEDSAGPHDVDKLEDDQGLKIRRTVTQIVPSDGHENGE
KKIENDGDDEDEEEEEDEKWTGGEKEKTRKPERSSDAAMETEVGDAMKVTPNDSLVRRSI
SQQKSGVSITIDDPIRPSRELSPPRGKTSNIIHVCNLVRPFTLGQLKELLNRTGTLVEEG
FWIDKIKSHCYVTYSTTEESMATREALHGVKWPTSNPKVLRVDFCDQDELDFHKGILSSN
RAGDGNDPQASGTPNRPAAPKPHMPTHREKKERERDRDGISVMRDQLAERERAMERREST
RSEREWDRGKVKEFGSEDKAGTTRSRSQDRRRRESEKSKEKRTEKKDKPEEPPAKLLDDL
FRKTKAAPCIYWLPLTEEQVTQRALERDERKKEREKRRKELQDEEDKKREERRERAKGRE
RVGGATGGVGAGGGVGLSAEGERDRGKERERERGREGEKRRDASRGNRDGDSKTAGGSRS
SLSRSNTSRDRRR
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaggatgttacgttagacgggaaaccgcttcattcgcttcgtgttgcg
gatttaaaagcggctctggagcaaagaggtctcgccaaaagtggacagaaaaatgcactt
attaagcgactgaaaggggctctgatgttggagaacctccagcgatcatccacccatcat
gctggacttcaacccaactctcaaatgggagaggagatgagtcagaacagctttataaag
cagtacctggccaaacagcaggagcttcttcgacagagactggaaagagaagccagagaa
gctacagaggcagatgagatacagcgtcctgctggtccaatgcaggatgaccacatgttg
accagcgaaagcacttcatgtctgccagacaagcatcgcattgtacattctcatatatct
ctaagccaggcagagggtggggatcgtggaggagggttgccccatgaccctggtttaatg
ggatcacacattctggatatgagcccttctcatctgcctcacgaagcccctgatactaaa
gccgggaggaacagacctcctcctaattttcctagccttgaggaagttgctacaccttct
cctccacgggcagttgcctccttgtctgtacgggtggttggacaacccgagcgtcaaggc
ctgccacttatgatgcctcgttcccaagagagggaaggaacagccccagttgaaacaggt
cctgcccagtcagtgttgcagcttagccgttctgcaagagctgcagcttttgttcaagct
gatggtgatgatgagggagaggatgatgacagtgacaacgatgatgaatggggtccgtcc
tcaaacgcgaaaaagagtgtgcgggctcctcctgtacaacctccaccagccacagtcccc
caacgatcccgtcgaaagcttcagcccccacaacatattcctccccagcctcagccagta
cctcagcctcctctgcagctccgccaacccactcctcctccatccccacccccagagctc
tcctttttacttcctgacactcccaaacaaagcccccatgaccaagatgaagcagtgggc
ccaggagatggtgctgctccagagccaggctccatgccctctcctcctcctttcaagagg
caggattccagctccagttctagatccagcagcccagaacctccgtccacacgaagacct
ggtcctctgagtctgcttgtactcaaaatggagtctgagggtgtgtttgttggtggacag
aaggtagggatagaaggggaaatggaagttgaagagcaggagggtggcaaaccagcagaa
gcacctgaagtacttatgggaacaaatgttcagaccgtacctcaaaactcaactcagcag
cttaacaggccacatgtgtctgtatcagtacccacaatgccctctgttcagcaagatact
catcatgaattggagaataagatctcaaaaactcacgatgagaaagatgagcaaaaaaga
ggtgaagagaaagaaaatgagaaagtgaatgagaccgctgcaccattccatatgaaagca
tccaaaatgttttcacttaaaagaccacacattttctctgccgtcccgccaccggagtca
cttaagtcaccttcaaaacctgagcaggtgtcagttctcaacacagcacctacctgctct
gaagatgttatgatggaaacggagacttctacagttgcttctcaatcaaaacacagcgag
gagaacaaagaagttaagatactagagaaactgtcacctagagcagaagaggagagtatt
atggtcccatcttcacactcttcatctgatgaaggtgaagtaggaaaaacatcagacgct
cacaaaccacgctcctcaacatcaagtcaatcaatttctgattcagagtcatcatcctcc
cattcttcaagctctccttcacatgagaaatccaggccacacagccaaaaaaaggataag
aagaccgagaaccaaaaagcagatatgaaagaaacgaagaccaaatctcccagggagatc
aaacaggaaggtctctctgagcctgcggggcaagttaccatggaacaggagggccgctca
gactcagagagtgcactgcaacaacctgaccaccaggaggcagatgcaagcgacctttgt
ccagagaagagctctcctgcgaaattgattgctgcgcgcaagatctcactgagcggtaaa
acagagaatgctgctgagcctgtgggcggagccaacaggaagagaaggtggggttcaagt
acagcagtcactgccaagaggccatcgattagcatcaccactgagtcactgaagacatta
attccagaaatcaagcctgtcctggaggctgtggttgaactgcacccagatgagggccag
ctctctagtgaagactcagcaggtcctcatgatgtagacaaactcgaagatgatcagggc
ctgaagattagacgcacagtgacacagattgttccatctgatggacatgagaatggggag
aaaaaaatagagaatgatggtgatgatgaggatgaggaagaggaagaagacgagaaatgg
actggcggagagaaggaaaaaacaaggaaaccggagcgctcctcggatgctgctatggaa
acagaagtgggagatgccatgaaagtcactcccaatgattccttggtgcggaggtccatc
agtcagcagaaatcaggtgtgtccatcacaatcgacgaccccatacgaccaagtcgcgag
ctgtctcctcctcgtgggaaaacttccaacatcatacacgtgtgcaacctggtgcgacct
ttcactctgggtcagctgaaggagctattaaaccgaacaggtactttggtggaggagggt
ttctggatcgacaagataaaatcccactgctatgttacttactcgactacagaggaatcg
atggccacccgagaagcgctgcatggtgtaaaatggcctaccagtaatcccaaagtacta
cgtgtggacttctgtgaccaggatgagttggacttccataaaggtatcttgtccagtaat
cgtgcaggtgatggaaatgacccccaagcttcaggaaccccgaatcggcctgctgcccct
aaaccacatatgcccacacaccgcgagaaaaaggaacgagaaagagacagagatggtatt
tcggtcatgagggaccagttggcagagagagaaagagcaatggagagaagagagagtact
cgttctgagcgggagtgggatcggggtaaggtaaaggaattcgggagtgaggacaaagct
ggaacaacaaggtcacgatcacaggaccgcagacgcagagagagcgagaagagcaaagag
aaaagaactgagaaaaaagataaaccagaggagcctcctgcaaaacttcttgatgatttg
ttccgtaaaactaaagcagctccctgtatatactggctacccctcacagaagagcaggtg
acacagagagctctggagcgtgacgagcgcaaaaaggaacgagagaagaggaggaaggaa
ctccaggatgaggaggacaaaaaacgagaagaacggagagaaagagcaaaaggccgtgaa
agagttggcggggccacggggggagtgggagcaggtggtggtgtgggtctttcagctgag
ggagaaagagatagaggtaaagaaagagagagagaaaggggtagagagggagaaaagagg
agagatgcctccagggggaacagagatggtgactccaaaactgcagggggcagcagatcc
tctctgagccgtagcaatacatctagagatagacgccgctaa
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