Triplophysa dalaica: 130428968
Help
Entry
130428968 CDS
T09616
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130428968 (arhgef40)
Membrane trafficking [BR:
tdw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130428968 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
RecC_4th
Motif
Other DBs
NCBI-GeneID:
130428968
NCBI-ProteinID:
XP_056613263
LinkDB
All DBs
Position
1:35442503..35478593
Genome browser
AA seq
1712 aa
AA seq
DB search
MGTEAVEDCIQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDFFVPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSTDFYLQVVPFSTRCPRLA
LKCLAAGGRNVQEVLVQESQHPLVFTAEWLHCINKERGCKREGGGGCLDTCLVSTPDGVV
RIPWEEVVYPKLLHNPSDPLHDNPDPTGMSSTSGGLGLGWVSSSGEHDSWSWDEEDDLPP
DGDEAETETALERLRRSSGTQLGDGAGDYVELLEPRGGPDGGADPKQRYLEMHGICKTKT
LPLCRRGKAFRLRKGKARGYGRTEPGGRAGSLVRRDSNNNGKDGVVSSRDQANSRPLPRV
IDLGRERRSYPLFQHFDEGARDTLGDESGTRDSTTKERRPGVGKERDGNGCMLSWEESQT
RHCSTDADDVTNNKVNNLGVEDHNQILQSVYDDTTLASTLDCGNEISPLANSSKGAGNEF
LPENIKKQLNDGYETRSPSLSDSLLNNEPDSSSCAQRTTEHSDDIKGKKHDGKAEMCVGP
RGKEVKPGGLRAPRRKRKGKGGKGKVKSNGRGQLKIKVDHTASKLQTKATHPTDSTKSPK
SISSQSGDTPQPSEVCSGCATSTITETHGETSCITLEQSPTSFPEQPQKEMGLNSESAAE
LKLKSPHLRDLDFNLLQSGKLTLTGTMDRLGRALVVTESHLPEDGWNEDEMIKVLSCYYT
ITRPMARDKGLTVIVDIRKSSSSELCFSALMAFKGQMEAGLDSVLILSEEQDETIQPCLD
GIEVHTVRGTAILQQFVDKQQLPTEMGGDFNHSHSDWLAFRLSLEELTERCESALTLLGD
ALRSMDTEPLPDCIKNVALGADKHRQLMTSILTDQRLTQLQQRGGTWLAGLANGMSGLAQ
KSPDCKAALAVTSDLYDGVDDALHRLVRVSNRRGCDLDALGRLATLVDKLEKCEREIEQV
QEQLEDYKHPPLSLSRLSLKQHKFKSFRESATELHSETLVLLGEVESWSELDWTGFMTVL
DKLPLIREKVRDMSHCLSDCWTQLDNTQRLLSTLTEASQWCDVVSSSSPSLSSSPLSSLP
PIPPSRFQDARALALDLGGGPLLDLWSQTLERYQKTLAQFKSRILQAEPRTPALSTSSLG
ELEGEIEPDWCPGAGGEGGVQSWGSLASLFRPQNCSTLKIGEEKKKEGANAGGGKFLQNL
LHTAKKNPTDAPLPPKPPRKRHPSFDLQALLAPRRSAAVSKPAEPAPSQSSSLSWLGRRA
LTDPVLSAGVAAAVPGWKDSAGGGGVLIRGVEVSSKEVADHTGLTRQHVLLSRTERETGL
ERAGATAQSKLYLQWCRLVSTERQYVAVLKGVEENYLPLLESLDAPSALRGKTEALFCNW
KSLCAFHTQLLLPAMEGALSQTLQQTDCFSKHKDHFLLFSHFIRMRLEPESPLIGQAADF
FRVKLSSSLLPAPPFPQCLTAPIQRLDQYCQTLEELGGLNPTSDSALSILRHAQRHGEDL
RASDLITGCPIAVLDRGDLLRQGELCVCSGGRRKKMGVRNVFLYQNYMIFTKHKTPNPGC
SAFSFKHSIKTGEMGLTQSVGEDGLRFEVWVRQASRTRDCLTLQTSSVQDREAWTHDVAQ
LLWTHAMHNTELCLRESLCMGVSSKLLLDVTGAQTSELDSSFSLNDRVQSSCSDSSSVGS
LKEGDSPASTRDSKRNTEQTAQAQSSSPSTSV
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagaggcggtagaggactgcatacagggggcgctctcctctctctaccctcca
tttgaaagcaccgctcctcctctgctctctcaggtgttctctgtactcgagtcaacgtat
caacatgacagcttgaggtatctgctagatttcttcgttcctgccaaacaccttctgcac
aagttacagcagcacgcatgttctcagtatctgggctgtctcttcttgcactccggttgg
cctctgtgtttgggagagaaggtagtagtacaactctctaccttggattggagactccta
cgtagtaccgacttttacctgcaggtggtgcctttctcgacacgttgccctcgccttgct
ctgaagtgcctcgcagctggtggacgcaatgtacaggaggtcttagtgcaggagtcacag
cacccgctagtgttcaccgccgagtggctgcattgcatcaacaaggagcgtggctgcaaa
agagaaggtggtggaggatgtttggacacctgtctggtaagcacacctgacggagtggtc
cgtattccatgggaagaggtggtctatcctaaactcctgcacaatccctctgacccactc
catgacaatcccgacccaactggcatgtccagcacttcaggaggtctgggccttggttgg
gtctcctcctcaggagagcacgattcctggtcctgggatgaagaagatgacttgccccca
gatggggacgaggcagaaaccgagactgcattagaacggctgcgaagaagcagtggcacc
cagcttggcgatggcgctggagattacgtggaactgctggagcctcggggaggccctgac
ggtggtgccgatcctaaacaacgatacctggagatgcatgggatctgtaagaccaaaacg
ctgcctctgtgcagaagaggtaaagctttccggcttcgcaaagggaaggcgagagggtat
gggaggacagaacccggtggaagggcgggcagtctggtacgaagggacagcaacaacaat
ggtaaggatggtgtagtgtcttccagagatcaagctaactcacggcctttgcctcgcgtc
attgatttgggtcgtgagaggaggtcatatcctttgttccagcactttgatgaaggtgct
agagacacgttaggtgatgaaagtgggactagagacagcacgaccaaagagaggaggcca
ggggtgggaaaagagagagatgggaatgggtgtatgctttcctgggaggaaagccagaca
aggcattgttctacagatgctgatgatgttacaaacaacaaagtgaataatcttggagtg
gaggaccacaatcaaatattacaaagtgtttatgatgatacaacgttggccagcacgttg
gactgcggaaatgaaatttcaccattagcaaattcctctaaaggggcaggtaatgaattc
ctcccagaaaacataaagaagcaacttaatgatggatatgagacaaggagcccatccctc
tcagattccctcctaaacaatgaaccggactcctcaagctgtgctcaaagaacaacagaa
cactcagatgacatcaaaggaaaaaagcatgatgggaaggcagagatgtgcgtcggtccc
aggggaaaagaagtcaaacctggaggactccgagcacccaggaggaaaaggaagggcaaa
ggagggaaagggaaggtcaaatcaaatggccgtgggcaactaaaaatcaaagtggaccac
actgcctcaaagctccagaccaaagcaacacacccaactgactcaactaaatcaccaaaa
agcatttctagccaatcgggggacactcctcagccttcagaagtttgcagtggctgtgca
acatccacaatcacagaaacacatggagagacatcatgtattacattggaacagtctccc
acatcctttccggaacaacctcagaaggagatgggattgaacagcgaatctgctgcagag
ttgaagctcaaatcaccccatctgagggacctggatttcaatcttcttcagtcaggaaag
ctaacgttaacaggtactatggaccgattggggcgagcgttggtcgtcacagagagtcac
ctcccggaggatggctggaatgaagatgaaatgatcaaagtgttatcgtgttattacacc
atcaccagacctatggccagagacaaaggccttaccgtgatcgtggacatcagaaagtcc
tcttcatctgaactgtgtttctctgcactgatggcgttcaagggacaaatggaagcgggg
cttgactcggttcttattctttctgaagaacaagatgaaacaatccaaccgtgtctggat
ggaattgaggtgcacacagtgcgaggtaccgcaatccttcaacagtttgtggataagcag
cagttgcccacagaaatgggtggagatttcaaccactcccactccgactggctggcgttc
agattgagtctggaggagttgactgagcgctgcgagagcgccctcaccctgctgggagat
gcactgcggtctatggacacagagcctctgcccgactgcatcaagaatgttgccctcggt
gctgacaaacacagacagttaatgacgagcatcctcactgaccaacggctgacacagctg
cagcagaggggcgggacttggctggcaggtctggccaacgggatgtcagggttggcgcag
aaatctccagactgcaaggctgctttggcagtgacctctgacctgtatgatggcgtggat
gatgcgcttcatcgactggtgcgcgtgtccaatcggaggggctgcgatctggacgctctg
ggacgattggccacgcttgtggataaactggagaagtgtgagcgtgagatagagcaggtc
caggaacagttagaggattataaacatccaccgctgtctctcagcagactgtctctcaag
cagcacaagttcaagagcttcagagaatccgctacggagcttcacagtgagactctggtg
ttgcttggagaagtggagagctggtctgagctggactggaccggcttcatgacggtgctg
gacaaactgcctctgattagagagaaagtgcgagacatgtcgcactgtctgtctgactgc
tggacacaactggacaacacacagagactgctgtccacacttactgaagcgtctcagtgg
tgtgacgtggtgtcctcttcatcgccctccttgtcatcgtctcctctctcctcccttcct
cccatccctccgtcacgtttccaggacgctcgtgcgctggctcttgatctgggcggcggg
cctttactggacctctggtctcagactctggagcgctatcagaaaactctagctcagttt
aagagccggatcctgcaggccgagcccagaactcccgcgctcagcacctccagcctcggg
gagctagagggcgagatcgagccggactggtgtcctggcgcggggggggaggggggtgtg
cagtcctggggctcgctggcgtctctctttcggccgcagaactgctccacgctgaagatc
ggagaggagaagaagaaagagggagcgaatgcaggaggaggaaagttcctgcagaacctg
ctgcacaccgcaaagaagaatcccacagatgcccccctgcctcccaaacccccccgcaaa
cgtcaccccagttttgacctccaggctctgctggccccgcgtcgttcggccgccgtgtct
aaaccagccgagccggcgccatctcagtcctcctcgctgtcctggctgggccggcgggcg
ctgacggaccctgtcctctcggcaggtgtggccgcggccgtcccgggatggaaggattcg
gctggagggggcggagtgctcatcagaggagtggaggtcagcagtaaggaggtggccgat
cacactggcctcacgcgacaacacgtgctgctctcccgaacggagagagagacaggactg
gagagagctggagccacggcacagagtaaactgtatttgcagtggtgtcgtctggtcagc
acagagcgtcagtacgtggccgttcttaaaggcgtagaggagaattatctgccccttctg
gagtcgctggacgccccgtctgcactgcggggtaaaactgaggcactcttctgtaactgg
aaaagtctctgtgccttccacacgcagttactcctccctgccatggagggcgctctctca
cagacgctacagcagaccgactgtttcagtaaacacaaggatcatttcctgctgttttcc
catttcatccgcatgagactcgagccggaatctccgctcatcggtcaggctgccgacttc
ttcagggtcaagctgtcgtcatctcttcttcctgctcctccctttcctcaatgtctcact
gctcccattcagagactggatcagtactgtcagacgctggaggagctgggtggtcttaac
cccacctctgactccgccctctccattctcagacacgcccagcgtcacggagaggatctg
cgagccagtgacctcatcacagggtgtccgatcgctgtgttggatcgcggggatctgctg
cgtcagggtgagttgtgcgtgtgcagcggaggcagacgcaagaagatgggcgtgagaaac
gtcttcctctatcaaaactacatgatcttcaccaaacacaaaacgcccaacccagggtgc
agtgcgttcagcttcaaacacagcataaagacaggtgaaatgggtctcactcagagcgtg
ggcgaggatggactaaggtttgaggtgtgggtgagacaggcgtctcgcaccagagactgt
ctcactctccagacgtccagtgtgcaggacagagaggcttggacccatgatgtcgctcag
ctcctctggactcacgccatgcacaacaccgagttgtgtctaagggagtctctatgtatg
ggagtttcaagtaaactattactggatgtgacaggagctcaaacctccgaactggactcc
agcttcagcctgaacgacagagttcaaagcagttgttcagactcatcgtctgtcggcagt
cttaaagagggcgactcgcccgcatccacacgagactcgaagagaaacactgagcagacg
gcacaagctcagagctcttcaccttccacctctgtgtga
DBGET
integrated database retrieval system
