Triplophysa dalaica: 130429000
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Entry
130429000 CDS
T09616
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
tdw
Triplophysa dalaica
Pathway
tdw03440
Homologous recombination
tdw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130429000 (brca2)
03460 Fanconi anemia pathway
130429000 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130429000 (brca2)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130429000 (brca2)
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130429000 (brca2)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130429000 (brca2)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130429000 (brca2)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
130429000 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
130429000 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
130429000
NCBI-ProteinID:
XP_056613311
LinkDB
All DBs
Position
9:16839350..16852565
Genome browser
AA seq
2789 aa
AA seq
DB search
MLEDFFDQIHKELGPLNPSWFDELTAKACRDEEGPDISKDEEEEIKAPEISALDTQMFST
PKIFKQHYHSPDSIRNEDSPYEVTNGLDSSPCLFGSEKQKSCGQPREGFGFLDTPKRPLI
HSVNQISRSLGAQINPDLSWTSSFNTPSLTPTVILPKTEDRPSSSSCLKDEEAIFVRKLF
PSLSKGTESTESSSKRAIKYDGTETFQTDDVVNTVRSPEASLDAISLWKQKVPSAIEEGD
VRTTVQNLLDGAEDILSIFFSKGTCALRKVKSQERNRKKANCSKDVTSALEQVKEPEETL
KGNETQTADVESKSPLTNIDVMQWTPLNLTNSSLNEGPSLAMPLINRHNTEMSDEPNAGT
TYSCPVGRSQSVFNSVERVKSCPDAEGSQRQKSLLDRSPVFMLNRKPRRFVYQVPSYDVS
NTGITHKASVCLEKTVTENPSEEKISSVLHESSFVSEDAANPQTLQQPTASYLDEGLDMT
QLSKAFAEDFTQELTSGVLVDTHVRGDQNDASSSAVTPHIEKVRQVKPEAEFEQTKEDFI
NQQGILCNRDDNYTLADVSVNESTVVLPTFEISRDSGCPTTFSDLDGTAASKDIFSGFKT
ASNRSISISHEAIMSAKASLHEAVGDSLIDTFDVTQHNHKTETSSKPVSEKANATRSPVV
QSNFSVLSLNTCVNDARSSPGLINSKSFKQNITSCSSPQSCVLNTCSKRNNTDSDVDAQK
AGSLWKENVEKDSDSLKQIHKKMEFTRGAERQTVLDISTHKPRLATSRDYAENCPLTASQ
NADVTELCNLLEEEDSQYEFTQLKPKKFASDSHTAEKEWDPNILNGIDFDDSFNSDVLNG
YHQIKTDASRINSSSHRHKEHECASVQIVDVDKLCNISKEIQNEVPFSKTEHNLVDGMNT
YFVKESQSNCFGFKTATGKVISISETNLNKAKHVFEELDEKAEADVLKPEQSKEQATVSS
ANTSECSNKKFIAHFRLNQDANDALNVNQKVVGDAEMKQNCLDGKTDVVCFNSNSHFGFS
TARGKQLNVSQTALVKARKLLNDVDSFDASEPQELIFHTSEIHADSMSTTTLQKTKAISW
HETSVNINQSDSDKINQVTNVTDIPSFACKNFIQEKKSGNDAKGNFTNICPPKTCQPLSV
HGYGFQTASGKDVSVSAGVLEKSKTVFKDCDENVDCLEAALTKEKNDKLHVEILKQTNAF
TTTSGTFFKVVLKEANAVCKDYDLINGLCDEANERSDFFRKTSQGDQGHDSKNPSLDQQP
PQEEGSKRSDTECNKDLQNKLFKDASEPLNSNCCFTTASGKAVSVLAESLHRAKDVLNDS
VDVIACNNGSRLAKQSVNNQTETSSSGNNNGFSTAGGKKVSVSATALERAEYLFKDCVER
SLASEDLQNQCCLSTASGKEVTLSDKELIFESVPKINYSLQNGEDGLMSEKVSSESSGEH
KGFCTAGGKNVTISATALQRAKTLFKDCEDEGLTSETLQNQNCEGFSTAAVSEKALHEVK
AVCFVDASFSHESKSNASGCHKTSCEKTVPSETVSSSDVNRGFCTAGGKKVTVSTSALER
AKILFHECDEKVQTKAGRPHATSEDVGNENPKFDQNYSFSTASGKDVPISEVALEEATKL
FRDCDVQQVNDTDNHPLDTKSHQDPPIMLDRSRDEESKTISHPTKVVQKEPAQLDLHSLY
FNSCTETQQEYFEQEAMACTKALLADDDLNEPPGLLPSASPSVHDLQEQNRKKRQLDTSS
IEDSCQPPLKRQLSEFDQTVACAKSSVPTPVKSLPNGSLKPRRVFRYSARLQPNVTHSNQ
NSVDQKSNDCVPHSSTATFQKRKPAVFVPPYKKIKEPETSDGQDASKVSSSFIPPFRKET
KEDTCHGDSLIKNPCEPKPQVDSSTTQENIVTNFTPSTHSTEQYGGENDQHVASGTEETI
SLGNIPLKNLDPEERGVFDTEACQEIFQLARDMQDMRLRKKKRQSIRPLPGRIYLTKSSG
VSRISLRDAVGHKCPVGYCPEELNQHGVHHKVSQITSENAESFRFDCKDFFKRDLLMESG
AVQLGDGGWLVPDSKGTVGKEEFCRAMYETPGVDPKLISDAWVFNHYRWIVWKRASMERA
FPDLMGSLCLTPEQVLLQLKFRYDVEVDRSQRPSLRRIMERDDTPAKTLVLCVCGVIKLS
NPNVEKPVKTVDRSTDAKKESTLIWLTDGWYAIKGLLDLPLYTMLNNGQLRIGDKIVING
AELMGSQEACPPLEAPESLMLKISANSTRRVRWDTKLGYYRDPRPFRLPLSSLFAAGGVV
SCVDIVLLRSYPTQWMEKKPNGVFIFRNDRAEDREARIHSNSKHKTMELLISKIQAQIEK
EMAGKTKGQGRKRTFSRHEIEALQDGEELYEAMECDPAVETHLSERQMEAVSKFTCCLGE
IRQAELQERVQKAMKEAQEAEGGCSDRDVTSVWKLSVIDANEMQSNCVYTMNIWRPSADL
YSLLKEGHRYRVYHLATSESKKRSGVANIQLTATKKTRFQDVEVTPEWLRVHFHARVCVR
FRELQNPQFISPCGEVDIVGCIVSIVDKRGNSPVLHLMDEKFDLVSVRTSGSLEQLALEE
LVKSRAMVALSNLQLRQLSGPVPCLYAGEQALFSINPKESHLQEAMVRLKSFVQTCEEFF
SIAEEKMSYIFPSEVSGSSQCPRIPVASYPKMNGRVTPQQKGRAFSPFTPVSTSNCEAKD
PKSVKRKRGFVYLSRIPSPPPLTPLKTKASPCINKTFNPPRRSVTPKPPEKERDSPKATR
STPGDEELVHDEELVMIDTQALLDGLKES
NT seq
8370 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagatttctttgatcaaattcataaagaacttggacctctgaatccatcctgg
tttgatgagttgactgccaaagcttgtagagatgaagaaggacctgacatatcaaaagat
gaggaagaggagatcaaagcccccgagatatcagctctggacactcagatgttttctaca
cccaaaatattcaaacaacattatcactctcctgattcaattcggaatgaggattctcca
tatgaagtgactaatggtttagactcaagtccttgtctgtttgggtcagagaaacaaaaa
tcctgtggacaacctagggagggctttggctttctggacacacccaagaggcctttgata
cattcagtaaatcaaatatcccgtagtcttggggcacaaatcaaccctgacttatcctgg
accagttcctttaacacaccgtcattgactcctactgtaatattacctaaaacagaggac
cgtccttcgtcttcaagttgcctcaaagacgaggaagctatttttgtgcggaaactgttt
ccatctctctcaaaaggtacagagagtaccgaaagttctagtaaaagagccattaaatat
gatgggacagagacattccagactgatgatgtggttaacactgttcgctccccagaagca
tctcttgatgcaatcagtctgtggaagcagaaggtgccgagcgccatagaggaaggagac
gtgcgcactacggtgcagaaccttctcgatggtgctgaggatattttgtccatattcttc
agtaaaggcacttgtgctctgaggaaggtcaaatctcaagagaggaacagaaagaaagcc
aattgttcaaaggatgtgacttcagcattagagcaagttaaagagccagaggagacttta
aagggaaatgaaactcaaacagctgatgtggaatctaaaagccctctcacaaacattgat
gtcatgcaatggaccccactgaatttaaccaactccagtctgaatgaaggtccatcattg
gccatgcctttgataaaccgtcacaatactgaaatgtctgatgaacccaatgctggcact
acttacagctgtcccgtaggcagaagccagtctgtttttaacagcgtcgaaagagtcaag
tcatgtccagatgcagaaggatctcaacggcagaagtctttgctggacagatcacctgtt
ttcatgcttaacagaaaacccaggaggtttgtgtatcaagtcccaagctatgatgtatca
aacacaggaattacccacaaagcatcagtatgtctggagaaaacggtgacagaaaatccc
tcggaggaaaagatttctagtgtccttcatgaatccagttttgtcagtgaagatgcagct
aatcctcaaacactacagcaaccaactgccagttatctggatgaaggactagatatgacc
cagctttccaaggcgtttgctgaagatttcactcaggaactgacttcaggagtacttgtt
gacacgcatgtacggggtgaccaaaatgatgcgagttcatcagctgtaaccccccatata
gagaaagtgagacaagtaaaacctgaagcagagtttgagcagacgaaagaagatttcatc
aaccagcaaggcattctgtgtaatcgtgatgacaactatactttagccgacgtatctgtg
aatgaatcaacagttgttcttccaacttttgagattagtcgtgacagtggctgtcccacc
actttttcagatttagatggcactgcagcctccaaggatattttctctgggtttaaaacg
gcaagtaacaggagcatctctatatcacatgaggcaataatgagcgccaaggcatcatta
catgaagctgtaggtgatagtttgattgacacctttgacgtcacacaacataaccacaaa
acagagacatcgtccaaaccagtttcagaaaaagcaaatgcaaccagatcaccagtggtg
cagtccaacttctctgtgctttcattaaatacttgtgttaatgatgctcggtccagtccg
ggacttataaactctaagagctttaaacagaatattacaagctgctcttcaccacagtca
tgcgttttgaacacatgttcaaagagaaataatacagactcggatgttgacgcgcagaaa
gctgggtctctttggaaggagaatgtggagaaagattcagattcattaaaacaaattcat
aaaaaaatggaatttacaagaggtgctgaaagacagactgtgttagacatcagcacacac
aaaccgagattggccaccagccgggactatgctgagaactgccccttaacagcatcacaa
aacgccgatgtcacagaattgtgcaatcttttagaggaagaagatagtcaatacgaattc
actcagttaaaacccaaaaagtttgcctcagacagccacaccgccgagaaagagtgggac
cccaatattctgaacggtattgactttgatgatagttttaattctgatgttttgaatgga
tatcatcaaatcaagacggatgcctctaggataaacagttctagtcacagacacaaggaa
cacgaatgtgcttcagttcaaatcgtagatgttgacaaattatgcaacatatcaaaggaa
atccaaaatgaggtgcctttttcaaagactgaacacaatttagttgatgggatgaatact
tatttcgttaaggaaagtcaatcaaactgttttggttttaaaactgctacagggaaagta
ataagcatctcggaaacaaatttaaacaaagccaagcacgtttttgaagagcttgatgaa
aaggcagaggcagacgtacttaagccagagcaatcgaaagaacaagcaacggtgtcttca
gccaatacttccgagtgttcgaacaagaaatttattgcccattttcggttaaatcaagat
gcaaatgatgctctcaacgtaaatcagaaagtggtaggagatgcagaaatgaagcagaat
tgtttagatgggaaaacagatgttgtctgctttaactcaaatagccattttggatttagt
accgcacgaggaaagcagttgaacgtatcccaaacggcccttgtgaaggcaagaaaactt
cttaatgatgttgacagctttgatgcgtcagaacctcaggaactcattttccacacttct
gaaatacatgccgactctatgtcaacaaccaccctgcagaaaacaaaagccatttcttgg
catgaaacctctgtaaatataaatcagtccgactccgacaagataaatcaagtaactaac
gttacggatattccttcctttgcatgtaagaacttcatccaagaaaagaaatctggcaac
gatgctaaaggaaacttcacaaacatttgtccccccaaaacttgccagccattgtcagtg
catggttatggctttcagacagctagtgggaaagacgtttcagtttcagctggggtactt
gaaaagtccaagaccgtattcaaagactgcgatgaaaatgttgactgcttagaagctgca
ctaacaaaggaaaagaatgataaactacatgttgaaatcctcaaacagacgaatgcattt
acgactacaagtggtacatttttcaaagtggtgctcaaggaggcaaatgcggtttgcaaa
gactatgatcttattaatggactctgtgacgaggcaaatgaaagaagtgatttcttcagg
aaaacatctcagggtgatcaaggtcatgacagtaaaaatccttctttggaccagcaaccc
cctcaagaagaaggatccaagcggtcagacacagaatgtaataaagaccttcaaaataag
ttatttaaggatgcttctgagcctcttaacagcaactgttgtttcactacagccagtgga
aaagcggtatctgtcttggctgaatcacttcatagagctaaggatgtgctgaatgattcg
gttgatgttatcgcatgtaataatggctctagattggcaaaacagagtgtgaataaccaa
accgaaaccagttcttcaggaaacaataatggattctctacagcaggtggtaaaaaggtg
tccgtttctgccactgcgttggaaagagccgagtatctgtttaaagattgtgtagagaga
agtttagcatctgaggatcttcagaaccaatgctgtctaagcactgctagtggcaaagaa
gttaccttatcagacaaggagctaatttttgagtctgtgcctaaaattaattacagttta
caaaatggagaagatggtctgatgtcagagaaggtctcatctgaatcctcaggagaacac
aaaggattctgcacagccggagggaagaatgtgaccatctctgctactgcactacaaagg
gctaagactctttttaaagattgtgaagatgaaggtttaacatccgagactctacagaac
caaaactgtgaaggttttagcactgctgctgtctcagagaaggccttgcatgaggttaaa
gcagtttgttttgtggacgcctcttttagccacgagtctaaaagtaatgcgagtgggtgt
cataaaacctcatgtgagaaaactgtcccgtctgaaactgtgagttcttcagatgtaaac
cgaggattctgtacagcaggtgggaagaaggtgactgtatccacttcggcacttgaaagg
gccaagattctctttcatgaatgtgacgagaaggtccaaactaaagcagggagaccacat
gcaacaagtgaggatgttggtaatgaaaacccaaagtttgaccaaaattacagtttcagc
acagccagtggtaaagatgtgcctatatcagaggttgcacttgaggaagccaccaaacta
tttagagattgtgatgtccaacaagtaaatgacaccgataaccatccactagacactaaa
tcacaccaggatcctcctataatgctggataggtctagagacgaagaatccaaaaccatt
tcacacccaacaaaagtagttcagaaagaacctgcacaactggacttgcactctttgtat
tttaacagttgcacagaaacccagcaggagtattttgaacaggaagctatggcttgcacc
aaagcgttattggcagatgatgacctaaatgaaccgccagggttgttgccatcagcaagt
ccatctgttcatgatctccaggaacaaaacagaaagaaacgtcaactagacaccagcagt
atagaagattcatgtcaaccacctttgaaaagacaactctctgagtttgaccagactgtt
gcttgtgctaaatcctctgtcccgaccccagtgaaaagcttgccaaatggaagcctaaaa
cccagacgtgtctttagatacagcgcccgcctccaacctaatgtcacacattcaaatcag
aattctgttgaccagaagtcaaacgactgtgtgccgcattcttctactgcgactttccaa
aaaagaaaaccggcagtttttgtgcccccctataaaaaaattaaggagcctgagacgtca
gacggtcaggatgcctctaaagtgtccagcagttttatcccacctttcagaaaggaaacc
aaagaagatacttgtcatggcgatagcttgatcaagaatccatgcgaacctaaacctcag
gtcgactcctctacaacacaggaaaatatagtgacaaactttacaccaagtacccacagc
actgaacagtatggtggtgaaaatgaccaacatgttgcttctgggacagaggaaacaatt
tcattgggaaacatacctttgaagaatcttgaccctgaagagagaggggtgtttgataca
gaagcatgtcaggagatcttccagctagccagggatatgcaagacatgaggcttcggaaa
aagaaaaggcaatctattcgtccattacctggccgcatttaccttactaaatcctcaggt
gtctccagaattagtctaagagatgctgtgggtcacaaatgtccagttggatactgtcca
gaggagctgaaccagcatggtgtgcatcacaaagtctcccagataaccagtgaaaacgca
gaatcatttagatttgactgtaaggatttcttcaagcgtgacctccttatggagtctgga
gctgtacagctgggtgatggaggatggttggttccagatagtaagggcactgtaggcaaa
gaggagttttgcagagcgatgtatgaaaccccaggcgtcgatccaaaactgatcagcgac
gcttgggtgttcaaccactaccgttggattgtatggaagagggcgtccatggaaagagcc
tttccagatttgatgggaagcctgtgtttgactccagagcaagtacttctgcagttaaaa
ttcagatatgatgtggaggtggaccgcagtcaaagaccttctctcaggaggatcatggag
cgagatgacactcctgctaagacattagtgctctgtgtatgtggtgttattaaactttca
aatccaaatgtagagaagccagtgaaaactgttgacagatcaactgacgcaaaaaaggag
tcaaccctgatctggctcacggatggctggtacgccataaaaggccttttggaccttcca
ctctataccatgctaaacaacggtcaactcagaatcggcgataagattgtgattaatggg
gcagagctgatgggttcccaagaagcctgtcctcccctggaagctcctgaatctctgatg
ctaaagatttcagccaacagcacaagacgggttcggtgggacactaagttagggtactat
cgtgacccccgacctttcaggctgccactgtcgtcactgtttgctgctggaggtgttgtg
agctgtgtggacattgtgttgttgagaagttaccctactcagtggatggagaagaagccc
aacggtgtctttatatttcgcaatgaccgcgctgaagatcgggaggccagaatacacagc
aactcaaagcacaaaaccatggagctccttatttccaaaatacaagcccagatcgaaaaa
gagatggcgggtaagacgaaaggccaaggtagaaagaggacatttagtcgacatgagatc
gaagctctgcaggatggggaagagctgtatgaggcaatggagtgtgacccagctgttgag
actcatctaagcgagaggcagatggaagcagtgagtaagttcacatgctgtctgggggag
ataaggcaggcagaacttcaggagcgtgtgcagaaggccatgaaagaggcgcaggaggca
gaaggcggatgctccgatcgagatgtcacctctgtttggaagctcagcgttatagatgcc
aatgaaatgcagagcaactgcgtttacacaatgaacatctggcgcccttctgcggacttg
tatagcttgctgaaagagggccacaggtacagggtgtatcacctcgccacatcagagagc
aagaaacgctcaggtgttgctaatattcagctcactgccactaagaaaacacggtttcag
gatgtggaggtgactccagaatggttacgtgtgcatttccacgcaagagtgtgcgtaaga
ttcagggaacttcaaaaccctcagttcatctctccctgtggtgaggtggacattgtggga
tgtatagtctccatagtggacaaacgaggtaattctccagtcctgcacctcatggatgag
aagtttgacttggtgtctgtgagaacgtctggtagtttggagcagttggccctagaggag
ctggtaaagtctcgtgcgatggttgctttaagtaaccttcagctaagacagctttctgga
cccgtgccatgcctttacgctggagaacaagcactcttctccataaacccaaaagagtcc
catcttcaggaagctatggtccgtctgaagagtttcgttcagacatgcgaggagtttttt
agcattgcggaggagaaaatgtcttatatatttccttcagaggtctcaggttcttctcag
tgtcctagaattcctgttgcgtcttatccaaaaatgaacggtcgggtgacccctcagcag
aaaggcagagctttctcgccattcactcctgtatctacgagtaactgtgaggccaaagac
cccaagagcgtaaaaagaaagcgaggttttgtctacctctcccgcatcccgtcccctcca
cccctcactcctctaaaaaccaaagcttctccatgcataaacaagaccttcaatccccca
cggagatctgtgaccccgaagcctccggagaaggagcgtgactcacccaaggccacgcgt
tctactccgggagatgaggagttggttcatgatgaggagctggtgatgatagacacccag
gcattactggatgggttaaaggaaagttga
DBGET
integrated database retrieval system
