Triplophysa dalaica: 130429293
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Entry
130429293 CDS
T09616
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130429293 (npas1)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130429293 (npas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
130429293
NCBI-ProteinID:
XP_056613750
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All DBs
Position
9:8146493..8182375
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AA seq
758 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLMEGQNNCNKVRRTTHSLA
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMADRLGIRPHLRAEAGCQTSHESASSSASTPSMAGTPEPAPSSPCSPANELSERGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPCTSRSLHRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLSPADVVGQTCYHFIYVEDLDTIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNVIWVNYVVSRLELADMPL
DLLQLPESLRAERLQVSSSPGHNSPKAQGSTVTQPIKSNAARAEPDRKGKETYAHSVSSQ
SEETRKRSHHPSSDSGPPDSRRRVEVFRQREDSPCTSSDQASDSEEEDERETQWDHASSG
KHMKNEDGTAKQDNGKIHNGRAVIQHLKCLVTSSASNIKTEQEVIGTNSGGRWSQPPSGG
GTNGSSPPSKSNPTEAPPKGLFNPPSPTLSPPISATPLARDDRSIHGGRASDFELLQRLT
ASGAAGRVLFHPLALGPQGPQSLYAPSTIRYAPAEMPAGHAEGHRSDYVAKTPAFFPHLQ
RIASLPPFSGFSPAEPTFPPTLPFCMNGLRGAAGTEED
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagcgaggggaagtgtgtgagcgtggagtgggatttccta
caggggttgctcgccaaaccaccaaccttgccctgcctgcaaaacttgaggaaggagaag
tcccgcaatgcggctcgttctcggcggggtaaagagaattttgagttctttgagttggcc
aaaatgctccctcttcccggagcaatcaccagccagttggacaaggcctccatcatccgc
ctcaccatcagctacctccatatgagacacttcgccagccaaggagacccaccctggagc
cctctaatggaggggcagaacaattgcaacaaggtgagaagaacgactcattcattggcc
actgatatatttgagcagcacctgggagctcatcttctacagtctttagatggatttgtg
tttgtggtcagtcaagaaggaagattcctttatatctcagagaccgtttccatctacctc
ggtctttcacaggttgagttgaccggcagtagcgtgttcgattacatccaccctgcggac
catgtcgagatggcagatcgccttggcattaggccacacctccgggcggaggcaggctgt
caaacgtcccatgagagtgcttcaagctccgcctccacaccttcaatggcgggaactcca
gaaccagcaccatccagtccctgttctcctgccaatgagctgtcagaacgtggcttcttc
atccggatgaaatccaccctcaccaaacgcggcctccacgttaaatcttctggttataaa
gtgattcatgtaacaggtcgaatacgctgtcggcccgccctggtgccatgcacctcccgc
tccttgcatcggccaatggggttagtcgctctggctcacacgcttccgccctctacgctt
aacgaagtgcgaatggaaagtcacatgtttgtgtttagggtcaacatggacttacaagtc
acctactgtgagaacaggatttctgagtatatggacctcagtccagcagacgtggttgga
caaacttgctaccacttcatctatgtagaagatctggacaccatcaggcagagtcatgaa
gacttattacggaaggggcaggttgtgacgggctactatcgctggctgcagaggagagga
ggctatctatggattcagtcctgcgcaaccgtgtccatcaaccacaaagcaccccatgag
cggaacgtcatctgggtcaactatgtggtcagtcgactagagctggcagacatgcctctg
gacttattacaactcccagaaagcctgagggcagaacggcttcaagtaagctcctcccca
ggccacaactctccaaaggcacaaggttccacagtcactcagcctataaaaagtaatgcg
gccagggccgaaccagaccgtaaaggaaaggagacctacgcccattctgtttccagccag
tcagaggagaccaggaagcgatcacaccatcctagctctgacagcggtcctccagacagc
aggaggcgtgtggaggtgtttcgtcagagagaggacagcccatgtacctcatcagaccaa
gccagcgacagcgaggaggaggatgagagagagactcaatgggaccacgcctccagcggc
aaacacatgaagaatgaggatgggacggccaaacaggacaacggtaagatccataacggt
cgcgctgtgattcagcatctaaagtgcttggtgaccagttcagcatcaaatattaaaact
gaacaggaagtgattggaacaaattcaggggggcgttggagccagcctccatccggtgga
ggaaccaacggaagcagcccgccttcgaaatcaaacccaacagaagctccacccaagggg
ctgttcaaccctccctccccaactttgtctccgcccatctctgccacgcctctggccaga
gatgatcgttccattcacggagggcgcgcttcagacttcgagctgctccagagactgacc
gcgagcggagctgcgggacgggtgctctttcatccgctggcgctcggaccacaagggcca
caaagtctctacgctcccagtacgattcgctacgccccagctgagatgcctgcgggtcat
gcagaaggtcatcgctcggactatgtggctaaaactccggctttctttccacacctgcaa
aggatcgcgtctctgccacccttcagtggcttctctccggcagaacccacctttcctccg
acactgcccttctgtatgaatggactgagaggtgccgctggaacggaagaggactga
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