Triplophysa dalaica: 130429373
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Entry
130429373 CDS
T09616
Symbol
lingo3a
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130429373 (lingo3a)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130429373 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
I-set
LRR_4
Ig_3
ig
Ig_2
LRR_14
LRRNT
LRR_9
Cupin_1
LRR_LRWD1
V-set
Ig_6
C2-set_2
Motif
Other DBs
NCBI-GeneID:
130429373
NCBI-ProteinID:
XP_056613874
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All DBs
Position
10:complement(10502077..10526621)
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AA seq
605 aa
AA seq
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MADCPHLSLPGLFLLLITASVTHGQSCPQRCDCILQQRAVMCQNKRLSSIPGGIPVDTRL
LDLSGNSLRWVEYNDLASFTRMEELDLSENLISVLEPNAFSSLLNLKVLRLRANQLKLIP
MGAFSRLANLTMLDLSENKLVILLDFTFQDLRNLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSISGQSLSYLRGLVTLRLRYLSIASLEEQNFRKLGGLRGLEIDNWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLAHLASLNLSYNPISVLESWALRDLVRLKE
LHLVGTKLILVQPYGLGGLQQLRLLNLSNNALVTLEEGSFXSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFDRRSPVCAAPVEVRGKALNMFSDSALFDHFTCQRPKIRNRKLQQLT
AREGQVVSFVCSAEGDPAPVIFWISPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVSGLPLDSALAANRTYYVGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCITFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgtccacatctgagcttaccggggctgtttttgctcctaatcactgcatcc
gtaacacacggccaaagttgcccgcagcgctgtgactgtatcctgcagcaaagagccgtg
atgtgccagaacaagcgtctgagctcaattcccggaggcataccggtggacacgcggctg
ttggacttgagcggcaacagtttgcgctgggtggaatacaacgacttggcaagcttcacg
agaatggaagaactggacctgagcgagaacctcatcagtgtcctggaacccaatgccttt
tccagtttgctcaatctcaaagtcttgcgtctgcgcgccaaccagctgaaactcataccc
atgggtgccttttcacgtctcgccaacctcaccatgttggatcttagtgagaacaaactg
gtcatcctattagacttcacctttcaggacttgcgaaacctgcgcaatttggaagtcggg
gataatgatttggtgtacatttcaaacaaggcttttctgggtctggttggtcttcgggaa
ctcacgattgaaagatgcaacctgacttccatatctggacagtctctttcctaccttcgc
ggtttggtgaccctacgattgcgctacctcagcattgcttcgttggaagagcagaacttt
cgtaaacttggcggtttgcggggtcttgagatcgacaattggcccttccttgagtacatt
tctccacacagcttccagggtctcaatctctcctggctctcgattaccaacaccaatatt
tccacagtgcctacgggtgctctccgaaaccttgctcacctggccagcctcaatctttcc
tacaaccccatctctgttcttgagtcctgggcattgcgtgatcttgtacggctaaaggaa
ctccacctagttggcacgaagctgatattagtgcagccgtatggtctcggaggtttgcag
cagttgcgtttgctcaatctatcaaacaacgcattggtgacgttggaggagggctccttc
nattcagttaacaccctggagacgttgcgtgtagatggcaaccctttgtcctgcgactgt
cgcctactctggatcctgcagcgtcggaagactctcaattttgaccgaaggtcaccggtt
tgcgccgcccctgtggaagtacgaggaaaagcactcaacatgttctcggactcagcgctc
tttgaccacttcacatgtcaaaggccgaaaatccgcaaccgtaagctacaacagctcaca
gcacgtgaaggtcaggtggtgtcatttgtgtgcagtgcagaaggagatccggctcccgtc
attttttggatttcccctcaacgccgccgtatcaccaccaaaagcactggtcgtgttatt
gtacttcctgaaggtacgttggagatccggtatgcccaggtgacagacagcggtacttac
atctgcatagcaagcaacgctggtggcaacgacacctactttgcgacattaacggtcagt
ggtttgccactcgatagtgccctggcagcaaaccgcacgtactacgtaggcgatcttaat
gacacaaacttaaacgacacgcgagtcttccttaagttcacgttggacctcaaaaccatc
ctggtgtcaacagcaatgggctgcatcacttttttgggtgtggttctgttctgttttata
ctgctgttcgtgtggagccgagggcgcggtcagcataagaacaatttctcagtcgagtac
tccttcagaaaggtcgatggaccagcagccagcggcggtcaagggggtgcgcgaaagttt
aacatgaaaatgatataa
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