Triplophysa dalaica: 130429398
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Entry
130429398 CDS
T09616
Name
(RefSeq) polyadenylate-binding protein 1A-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
tdw
Triplophysa dalaica
Pathway
tdw03015
mRNA surveillance pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130429398
09123 Folding, sorting and degradation
03018 RNA degradation
130429398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130429398
03041 Spliceosome [BR:
tdw03041
]
130429398
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130429398
mRNA cycle factors
Stress granule specific factors
130429398
Spliceosome [BR:
tdw03041
]
Complex C
Other components
Complex C specific factors
130429398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_Nup35
RRM_10
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
130429398
NCBI-ProteinID:
XP_056613913
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All DBs
Position
10:complement(16661110..16664319)
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AA seq
524 aa
AA seq
DB search
MASSASARVASLYVGDLHLEVSEVMLYERFIPFGPIQSTRVCRDRNTCRSLGYGYVNFVN
HSDAEHAMDILMFDLLMGRPMRIMWADRNPALRITGVGNIFIQGLAKNITNLTLHDTFSR
FGTILSCKVVADENGSKGYGFVHYETYEGAERAIQTLNGMMLNDQLVSISHFRSFQERQS
NPERAMKNYKSHFPGVHLYVNNLPYSWTDNQLHRAFSLFGTVTNAKVVMNGGRSKGFGFV
CFASREAAAQAISAMNGLVIANRRLNVAFSRVMDQDTSVSVAHCETPPVVAKTLLPSGRF
GAIVPQAKTAHQLTRHLQLESCCRREAACLLSNCESLVSLVSPLLLDMLVSHTPVDALQH
VNQELSELMSDPIIDAPGTSDTFSAVTSPLSGDFGAVVPKTHSSGGHQFSRCLVFSRRWF
ADVALPQCESLVLLVSPLLSDTFDSETPRMLTVNQEQSEMTPDQATDAPGPSDACSDVAV
VHDRFGNGLGKIRHMSSFQVGEISWFFKDLHSTQFFTLRVIFHL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcagcatctgctcgcgtggcctctctgtatgtcggtgatcttcacctggag
gtctcagaggtcatgctgtacgaaaggttcatcccgtttggtccgattcagtccacccga
gtgtgtagagacagaaacacctgcaggtctctgggctacggatatgtcaactttgtcaac
cattcggatgccgagcatgcaatggacattttgatgtttgacctcctcatgggtcggccg
atgcgcatcatgtgggccgaccgaaaccccgcattgaggatcacaggtgttggcaacatc
ttcattcagggtctggccaagaacatcaccaacctgactctacacgacaccttctctcgt
ttcggcaccatcttatcttgcaaggtggttgctgatgagaatggctctaagggatatggt
ttcgtccattatgagacctacgaaggcgctgaacgagccattcagacgctcaacgggatg
atgctgaacgatcagctggtgtctattagtcacttcagatcgttccaggagcgtcagtca
aaccctgagcgtgcaatgaagaactacaagagtcacttcccgggggtgcatctctatgtt
aataatctaccctacagctggacggacaaccagctgcatagagcgttctccctgtttgga
accgtcaccaatgcaaaggtggtgatgaacggtggccgcagcaaagggtttggatttgtg
tgttttgcaagccgcgaagccgcagctcaagccatttcagcaatgaacggactggtcatt
gccaacagacggctgaatgttgccttctcgcgggtcatggaccaggacacgtctgtgtct
gtggcccactgtgaaacacctcctgtggttgctaagacgctgcttccttctggacgcttt
ggtgccattgttccacaggctaaaactgctcatcagctcaccagacaccttcagcttgag
tcctgctgtcgccgggaagcagcgtgtctcctgtctaactgtgagagtcttgtctcgctg
gtctctccactgctgttagacatgctggtgtcccacacgccagtagatgcactgcagcat
gtgaaccaggagctgtcagagctgatgtctgatcccatcattgatgctcctggaacatca
gacactttcagcgctgtaacctctccgctgtctggagacttcggtgctgtcgttccaaag
actcatagcagtggcggtcatcagttctccagatgtcttgtgttcagtcgtcgctggttt
gcagatgttgctctgcctcagtgtgagagtctcgtcctcctggtctctccactgctgtca
gacacttttgactctgagacgccccgcatgctgaccgttaaccaggaacagtcagagatg
acgcccgaccaagccaccgacgctcctggaccatcagacgcctgcagtgatgttgctgtg
gttcacgacaggtttggcaacggtttgggtaagataagacacatgagcagcttccaggta
ggagaaatctcttggttttttaaggatttgcactcgacacagttcttcacattaagggta
atctttcacttataa
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