Triplophysa dalaica: 130429478
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Entry
130429478 CDS
T09616
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
tdw
Triplophysa dalaica
Pathway
tdw04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130429478 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130429478 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
tdw04131
]
130429478 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
tdw03029
]
130429478 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdw04812
]
130429478 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130429478 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
130429478 (si:dkey-110c1.10)
Membrane trafficking [BR:
tdw04131
]
Others
Actin-binding proteins
Myosins
130429478 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
tdw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130429478 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
tdw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130429478 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_22
NPHP3_N
Knl1_RWD_C
AAA_16
Motif
Other DBs
NCBI-GeneID:
130429478
NCBI-ProteinID:
XP_056614029
LinkDB
All DBs
Position
10:complement(10329259..10343819)
Genome browser
AA seq
1668 aa
AA seq
DB search
MATTELYTKGACVWVPDPEAVWVSAQLLREYRPGDQQILIQHADGTETEYPVMPPSSLPP
LGNPDILEGENDLTALTFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVALNPYEQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEDAYRTMIREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGATQQTSVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFGHKGDIIGANMRT
YLLEKSRVVFQAAEERNYHIFYQLCASKDLPEFRSLKLDSAENFRYTNQGRNLHIPDTDD
AVELERTRNAFTILGVQPDQQMEIFHVMAAILHLGNVNIQASGRGGERSYVDAHDRSLAI
FAKLLGVEGAQMAQWLCHRRLAVGGEMLVKPMTGQQAIEARDALGKHMYEQLFTWTVQRL
NSSLRAHRQQPKSYIGVLDIYGFETFHRNSFEQFCINYANEKLQQQFNRHVFQLEQEEYL
REQLPWNRIEFSDNQPCIALIEGQLGLLDLLDEECKMPKGSDENWAQKLYDQHLNHSAHF
RKPRMSNNAFIVLHFADMVQYECDGFLDKNRDTAFEEPINILRASQSELVAELFQKEPAG
EVLPNSSLPNGSLRSGKRAHREHKLTVGFQVGVFTSYSCLSVQFRQSLQLLMETLNSTTP
HYVRCIKPNDLKQPFLFDPKRAVQQLRACGVLETIRISAAGYPSRWTYEEFFTRYRVLLH
GSLSTDDLRRSCQRTLSDLIPDPEQYCFGKTKVFFRAGQVAVLEKLRGDKLHAAGVLIQS
WVRGWLQRKQYQKLRWAALIVQRYTRGTLARRLAWSLRYTRAALIIQKTYRMLAVRQLYL
TIREAAIKIQSFIRGTQARRIYRQMLVEQAVVFLQARVRGWLARCRFRHIRGAVVYLQCC
VRRWAARKELRQLRAEARSVEKYRELNKGMEVKLMQLQLRADQQARESASLRETLKAERE
AYSTELEQLRSSLQKLQTQLRENVIAAPLITEKKEEERRRAEERHAQEILHLKQEIEAIR
DKRDALEKEKDDLAIRLQEQEKSRQETHQQTVDEADASVRAELEEERRRYQSLLREFTRL
EQRYDNLRDMSMFSNNERSRGHRRTDSSVSLEALSPVSTPFSSSPIFPSPEEVRRVSVTS
PTDRRPWSSEQPMDVLMENVGVAKDTAEKMKGEDLKHAYDAVRVANKFLETQLLSQRAQW
EEEISALRMKPHEARDRGDTAGDAEIKDLAEQVAVRDQECSRLRRELKELKHTVTLRRIL
SYAGLCLAMVESQDPSPAPEKNQMLTGLLECRKKDENKLIKNLITDVRVEVGLSLPSGLA
ARVLFLCIRQVDCSGDQTRVKGLCVASVGGIKNGLKKHGNDLDMTAMWLKNAYLLKDLLQ
QHSPRKDMKGSEELVPLVTDVQESVRALSDLCIQAYQQLLSISESRLQPIIVPAMLESET
ISGLSGSSVKMSSGRKRAASDPRAPAEGASMSAVLRELGALHTALSRQDLPSGLLEQAFH
QLIYLLAATTLNSLLLRKDMCCWNRGLQIRYNVSLLEEWLRSRSLQTGGAVTALEPLIQV
AQLLQMGKKTEADGQAMVKTCNALTNQQIVKILSLYTPQSDTEERVTLNFIRIVQGLLKV
RSEGQPPQLLRDVRRVFPVTFPYQKPAPVSAAQLKIPESLKISFLRRI
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacagagctctacacgaagggggcatgtgtgtgggtgccggatccagaagca
gtgtgggtgtctgctcagcttcttcgagaatatcgtcctggagaccagcagatcctgatc
caacacgctgacggcacggagacggagtatccggtgatgcctccctcgagtcttcctcct
cttggaaaccctgatattttagagggagagaatgacctcacggctctgacttttctccat
gagccagctgtacttcacaacttgcgagtgcgctttctcgactacagtagcatttacacc
tactgtggaattgtgttggtggccctaaatccttatgaacagctgcccatctatggagag
gaggtcattgatgcatacagtgggcaggacatggctgatatggaacctcatatattttct
gttgccgaggatgcgtaccgtaccatgatcagggaggaaaaaaatcagtccatcataatc
agcggagagtcaggttcagggaaaacagtatctgccaagtttacaatgcgttactttgct
gttgtgggtggtgcgacccagcaaaccagcgtggaggagaaagttctggcatctaatccc
atcatggaggccattggtaatgcaaaaacaacccgaaacgacaacagcagccgttttgga
aagtatattgagataggatttgggcacaaaggggatatcattggagcaaatatgagaacg
tatttgttggaaaaatctagagttgtttttcaggcagctgaagagagaaactaccacatt
ttctatcagctttgtgcctccaaggatttgcccgagtttaggtcactaaaacttgattct
gcggagaacttccgttacaccaaccaagggcgaaatttacacattccagacacagatgat
gctgttgaactagaacgcacaagaaatgcttttactatactgggagtgcagcctgaccag
cagatggaaatatttcacgtaatggcggcgattcttcatcttgggaacgtcaatatacaa
gccagtggtcgtggcggagaacgcagctacgttgacgcccatgaccgttctctggccatc
tttgccaagcttttgggagtggaaggtgctcagatggcacaatggctgtgccacaggcga
ttggcggtgggtggggagatgctggtgaagcccatgaccggacaacaggctatcgaggca
cgagacgctttgggcaaacatatgtatgagcaactgttcacgtggaccgtacagaggctc
aactcatctttaagagcacacaggcaacagcccaagtcctatataggtgttcttgatata
tacgggtttgaaacgtttcacaggaatagttttgaacaattctgtataaactacgccaat
gagaagctacagcagcagttcaacaggcatgtgtttcagttggagcaggaagaatatcta
cgtgagcaacttccctggaaccgcatcgagtttagtgataaccagccgtgtattgctctc
atcgaaggtcagctgggtctacttgatcttctggatgaagagtgcaaaatgccaaaaggc
tcagatgagaactgggctcagaagctttatgatcagcacctgaaccacagcgcacatttt
cggaaaccgcgcatgtctaacaacgccttcatcgttctgcactttgctgatatggtccag
tatgagtgtgacggctttttagacaagaaccgagacactgcatttgaagagcccattaac
attttaagagccagtcagtcagagctggtcgctgaactgttccagaaagagccggcagga
gaggtcttgcccaactcttctctaccgaacggaagtctgcgctcagggaaaagagctcac
cgtgagcacaaacttaccgtcggctttcaggtcggagtttttacttcatattcatgcctt
tccgtccagtttcggcagtctctgcagctcctgatggaaaccctgaacagcaccacccca
cattacgtccgctgcataaaacccaacgacctcaaacagcccttcctattcgaccccaag
cgggcggtgcagcagttgcgagcatgtggagtcttggagacgatccgcatcagcgctgca
ggatacccctccaggtggacgtacgaggagtttttcacccgttaccgtgttctgctgcat
gggtcgctttccacggatgacctaaggcgctcttgccagagaactctttctgacctcatc
cctgacccggagcagtactgcttcggcaagaccaaggtcttcttccgggccgggcaggtt
gcagtgctggagaagctgagaggggataaactgcatgcggcgggggttttgatccagagc
tgggtgagaggctggcttcagcgtaagcagtatcagaagctccgatgggctgctcttatt
gtgcagcgatatactaggggaaccctggctcgcaggttggcgtggagtcttcgttacacc
cgagctgctttaatcatccagaagacctaccgcatgcttgctgttcgacagctttatctg
accataagagaggccgccattaagatccagtcctttatcagaggcacccaggcccgacgt
atttacagacagatgctggtagagcaggcagtagttttcttgcaggcgcgggtgcgagga
tggctggcccgatgcaggttcaggcacattagaggtgcggtggtgtacctgcagtgctgc
gtgcgcaggtgggcggcccgtaaagagctgcggcaattacgtgctgaggcgcgatcggtg
gagaaatacagagaactgaacaaaggcatggaggtcaaactcatgcagctacagctcaga
gccgatcaacaggcgagagagagcgcgtctctgagggagaccctaaaggccgagcgagaa
gcttacagcactgaactggaacagctacgctccagccttcagaaactccagacccaactg
cgggagaacgtcatcgcagcgcccttgatcacagagaagaaggaggaagagaggaggaga
gcagaggaaagacatgctcaagagatcctccaccttaaacaggaaatcgaggccatccga
gataagagagatgccttggagaaagagaaggatgatcttgccattcgtttacaagaacag
gagaaatcacggcaggagacacatcagcagactgtggatgaggcagatgcatcggtgcgg
gcagagctggaggaggagaggaggagatatcagagtttactcagagagtttacaagactg
gagcaaagatatgacaacctgagagatatgagcatgtttagcaacaatgagcgttcacgt
ggacacaggcgaacagattccagcgtgtccttggaggccctttcaccggtctccacgccc
ttctcgagctcacccatcttcccatcgcccgaggaggtgaggagagtcagcgtgacatca
cctactgacaggagaccctggagctccgaacaacccatggatgtcctaatggagaatgtg
ggcgtggccaaggacacggcagagaagatgaagggagaagatctcaaacacgcctatgac
gctgttcgagtggccaacaagtttttagagacgcagctgttgtctcagagagcacaatgg
gaggaagagatatctgccctcagaatgaaacctcatgaggctcgagacagaggagataca
gctggagatgctgagataaaggacctggcagagcaggtggcggtgagagatcaggaatgt
tctcgactacgacgtgaacttaaagaactcaaacacactgtgacgctcaggagaatttta
tcatacgcaggtctgtgtctggccatggtagaatctcaggatccatctccagcccctgag
aagaaccagatgctcaccggactgctggagtgcaggaagaaagatgaaaacaaactcatc
aaaaacctgataacagatgtacgggtggaggtcggactatctttgccgtccgggctggcg
gcgagggttctgttcctgtgcatacgacaggtagactgtagtggcgatcagacgcgagtc
aaggggctttgtgttgcttctgtgggcggcattaaaaacggcttgaagaaacatggcaat
gatttggacatgactgctatgtggctgaagaacgcttacctgctcaaagatctgctccag
cagcactcccctcgaaaggatatgaagggctcagaggagctggtgcctctcgtgacagat
gttcaggagtctgtccgagcgttgagtgatctttgtattcaggcatatcagcaactgttg
tccatctcagagagtcgccttcaacccatcattgtacctgccatgcttgaaagtgagact
atctctggtctgtctggatcatcagtaaagatgagcagcggtcgcaagcgtgcagcatca
gatccccgcgctcctgcagaaggggctagtatgtcggcagttctgagggaactgggagca
ttacacaccgcactgtcccgtcaggatctgccttcgggcctcctagaacaagccttccat
cagcttatctacttgctggccgccaccaccctcaacagcctgctgctgcgcaaggacatg
tgctgctggaaccgtggccttcagatcaggtataatgtgagtttgctggaggagtggctg
cgcagtcgttcactgcagacagggggtgctgtgaccgctctcgaacccttgatacaagtg
gctcagcttcttcaaatgggtaaaaagactgaagctgatggacaagcaatggtcaaaacc
tgcaacgcactgaccaaccagcagattgtgaagattttgagcctgtatactcctcagagt
gatactgaagaaagggtgacgctaaacttcattcgtatagtacaggggctgctgaaagtg
cggtctgaagggcaacctccacagcttctgagggatgtccggagggttttccctgtcacc
ttcccttatcagaagccagcaccagtcagcgccgcccagctcaaaatcccagaatccctc
aagatctcattcctacgccgaatctga
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