Triplophysa dalaica: 130429587
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Entry
130429587 CDS
T09616
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
tdw
Triplophysa dalaica
Pathway
tdw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130429587 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130429587 (arhgef18b)
Membrane trafficking [BR:
tdw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130429587 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
PH_13
SOS1_NGEF_PH
C1_2
Motif
Other DBs
NCBI-GeneID:
130429587
NCBI-ProteinID:
XP_056614213
LinkDB
All DBs
Position
10:complement(5242677..5277538)
Genome browser
AA seq
1373 aa
AA seq
DB search
MDRLFAIRTSEFQDFPGPGQDEDSETESIPILVRSMSTSRRHSSDMPLSPIDLGRRFSLD
TTDIDSDGEQEMRCSHLPSSSFSESSVEETSGAIETESLETAKTPASGKMVYSRSEILAT
EVNSQADRVSRILETSQQAAREAGEEQETEEGLQSVDGRCHVLMVQKVLQELKQYHGTSS
TERKEFSGNVTWYEFLAKENDDEEEERPERSEKGTKVKRTLSSLRNRMTGSFNKDKGKTR
EKEQHKNTEKEFKECKKVRRVSVSGHQLVPGSFSSWARCSLCSKSLQRKHGLQCLNCAVN
VHKSCRTLLPECSSKGKTKDSGQKISTSAAQSNNQALRETSSALTLTADGSSRTARCALG
MTVSPKGHSAQPAASSNHTANQNSSSSGSVSGDMDEVDAFRMKRPADDTVSLVSSTPESL
IVEDVYYTTLRGELESIAQDFEVESWSLAVDNNFLKKHTKEMAKRQDVIYELIQTEMHHM
RTLKIMQRVYARELREALQMDDKRLDCLFPQLDSLLELHSHFLSRLRERRTESLQTGSEH
GYAINQLSDILISQFSGELGERMKDCYGDFCSRHTEAVNYYKEQIQNNKKFQNLMRKISN
LSIVRRLGVPECILLVTQRITKYPVLVERILQNTEAGTEEHEGLAEALGLIKDVIVQVDA
QVNLYEKEARLREISSKMEPKPLGKIKDGRFFRKEDLCQGRRRLLNEGTVFWKAASGRLK
DILALLLTDVLVLLQEKDQRYMFSTVDNKPSVISLQKLIVREVAHEERAMFLICASSNRP
EMYEIHTASKEERNTWITHIRQAVESCPHTEERLFSEEEEAMVARFREFHERLMLKDAEI
AHSLTDKLQLFSDLVESVAGVEDVSHHSRLLLRGDASDLQQGEQLIKGAITEVENLQNLL
VSGVKETSLQTEGNQSPGLSMLPRRADTFGGYDSTPKILPKNGSVKKKVSGAAGRSRDRN
ERASSDPQIKEAYAFQIQEELDETSSSGCHKTSTFRFPQAEFYERVLLLSQRLYSLQAIV
AQQDSHIELQRASLLSAERERSGGRCRGTDVLLEQEKQRNLEKHREEMVNFQRLQSQHRQ
EQARWERERERQRRQTEAAERRLKEKEEECRRLEAGLAEERQELERQKQTYQQDLERLRE
STRAVEKERERLEQQRKLRKHNTVANAAALYAQEAGKLPLSSSFNGELLFGGPGDQSHPQ
KVLLRSSLSVSPADYPDRPEIHSRRESSCNTLSTKTEVPIHLVSTTNQLHKQGGVQQQIP
TKLAALSRGKEKSGKGKSSHRSESLASVDMKQLLPVKLSARDSEGNLKARRPVSPHHQPL
QPQPSHSDSLSPPDGNVDAQSSLAVLTTQNQNVQQTLQYAVGDEATKEDVIFF
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttgtttgctataagaacgtcagagttccaggattttcctggaccagggcaa
gatgaggattcagaaacagagagcattccgattttagtccggtccatgtccacgtcacgc
aggcacagctctgatatgccactgtctccaattgacctgggaagaaggttcagtttagac
accactgacattgacagcgatggggaacaagagatgcgatgttcccatttaccatcttcc
tccttttctgagagttcagtcgaggagacgtctggtgccatcgaaactgaaagccttgaa
acagctaagactcccgcatcaggaaagatggtgtattccagatccgagattctcgccact
gaagttaattctcaggctgacagggtctctcgcatactggaaacgtctcagcaggctgcc
agagaggccggagaggaacaagagacagaagaggggctgcagtctgtggatggacgatgt
cacgtgctgatggtacagaaagttcttcaagagcttaaacagtatcacggaacttcaagc
acagaaagaaaagaattttctggaaatgttacatggtatgaattcctcgccaaagaaaac
gatgatgaagaagaggaacgaccagaacgttcagaaaaagggaccaaagtcaagcgcacc
ctcagctctctgaggaaccgaatgacgggatccttcaacaaagacaaaggtaagacccgt
gagaaagagcagcacaaaaacacagagaaagagttcaaagagtgcaagaaggtgcgacgt
gtcagcgttagcgggcaccagctagtgcccggctccttttccagctgggcgaggtgttca
ctgtgcagcaagagtctgcagcgaaagcatggcctgcagtgtttgaactgtgccgtcaac
gtccataagagctgcaggaccctgttaccggagtgtagcagtaagggcaagactaaagat
tcaggacagaagatatcgacctctgccgctcagtcaaataatcaagctctgagggagacc
agctctgccctgacactcaccgccgatggctcgtccagaacggctcgctgcgctttaggt
atgaccgtttcgcctaaaggacacagcgcccaaccagccgcctccagcaatcatacagcc
aaccagaacagcagcagcagcggctctgtctcaggagatatggacgaggtcgatgcgttc
aggatgaagcgccctgctgacgacactgtgtctctcgtctcctcaacacccgagtcgctc
attgtggaagatgtatattacaccactttgcggggcgagctggagtccatcgcgcaggac
tttgaagtggagtcctggagtctggccgtggataacaacttcttgaagaagcatacgaag
gaaatggccaagagacaggacgttatatacgagctcatccagacggagatgcatcacatg
aggacgctgaagatcatgcagcgtgtgtacgcccgagagctgcgcgaggccttacagatg
gacgacaagaggctggactgtttgtttccacagcttgacagcctgctggagctgcacagt
cacttcctttcccgcctcagggagcggcgcacagagtccctgcagacgggcagcgaacac
ggttacgccatcaaccaactctcagacatccttatatcccagttttccggagagcttgga
gaacgaatgaaagactgttacggggatttctgcagtcgccacactgaagcagtcaactat
tacaaagaacaaattcagaacaacaagaagtttcagaacctcatgaggaaaataagcaat
ctgtcaattgtgcggcgattgggcgttccagagtgcatcctgttggtgacacagcgaatc
accaagtaccctgttttagtggagcgaatcctgcagaatacagaagctggcacagaggaa
catgaaggtctggcagaagctctcggcctgatcaaggacgtcatcgtgcaggtggacgct
caggtcaacctctacgaaaaggaagctcggctccgagagatctcgtccaagatggaaccc
aagccactgggaaagatcaaggacggacgttttttccgcaaggaggatctgtgccagggc
cgtcgcaggctgctgaatgaaggcacggtcttctggaaagccgcgtccggtcgactcaaa
gatattctcgctctcctgctgactgacgttctcgtattgttgcaagagaaggatcagaga
tacatgttctctactgtggacaacaagccgtccgtcatttccctgcagaagctgatcgtg
cgagaggtcgctcacgaggagcgggcaatgttcctcatctgcgcctcctctaaccgacca
gagatgtacgagatccacacggcctcgaaagaagagcgcaacacatggatcacgcacatc
cgacaggcggtggaaagctgtccacatacagaggagaggctcttcagtgaggaagaggag
gccatggtcgctcgattccgagagtttcatgagcggctgatgttgaaggacgctgagatc
gctcatagcctcacagataaactgcagttattctcagatctggtcgaatctgtggccggt
gtggaagatgtcagtcatcactcgcgtttgctcctgcggggcgatgcctcggacctccag
cagggggagcagctcatcaaaggagccatcaccgaagtggagaacctacagaacctcctg
gtatccggtgtgaaggaaacatctcttcaaactgaaggaaaccagagtccagggttgagc
atgcttccccgcagggccgacaccttcggtggctacgacagtactcctaaaattctgcct
aaaaacggtagtgtaaagaagaaggtctccggagcggcgggcaggtccagggatcgcaac
gaacgagccagctcagacccacagatcaaagaggcctatgcctttcaaatccaggaagag
ctggatgagacctcatcatccggctgccacaaaacatcaaccttcagatttccacaagca
gagttctacgagcgagtcctcctgctgtctcagcggctctacagtttacaggccatcgtc
gctcagcaggacagtcacatcgagctccagcgggcctctctcctctctgccgaacgggag
cgttctggcggccgatgccgcggcacggatgtgctcctcgagcaggagaaacaaaggaac
ctggagaagcaccgcgaggagatggtaaactttcaacgtctgcagagccagcacagacag
gagcaggcccgctgggagcgggagcgcgagaggcagagacggcagaccgaggcggcagaa
cggaggctgaaggagaaagaggaagaatgcagacggctggaagccgggctagccgaagag
agacaggagctggaacggcagaagcagacgtaccagcaggacctggaacggctgcgggag
tcaacaagagcggtggagaaagagagagagagacttgaacagcagaggaagctgagaaag
cacaacactgtggcgaacgctgctgcgttatatgcacaggaggctggaaagcttcctctc
tcctcaagctttaacggcgagctcttgtttggtggaccaggggaccagtcgcatcctcaa
aaggtgctcctgcgatcctctctctccgtatcccccgccgactacccggaccgtcccgag
atccactcacgccgagagagctcctgcaacaccctgtcgacgaaaacggaggttcccatc
cacctcgtcagcaccaccaaccaactgcacaagcagggaggagtccagcaacagatcccc
accaaactcgccgccctcagcaggggcaaagagaagagcgggaagggaaagagttcacac
cgctccgagagcttggcctctgttgacatgaagcaattgctgcccgtcaagctgtcagca
cgagattcagagggaaacctaaaagcacgccgccccgtcagcccccaccaccagcccctc
caaccccaaccgtcacactcagattccctcagccccccggatggcaacgtggacgcccag
tccagcctcgccgttctcacaacccaaaaccagaacgtccagcagaccctccagtacgct
gtgggcgacgaggcaaccaaggaagacgttatctttttctga
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