Triplophysa dalaica: 130430155
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Entry
130430155 CDS
T09616
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin Fat 4-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
tdw
Triplophysa dalaica
Pathway
tdw04371
Apelin signaling pathway
tdw04514
Cell adhesion molecules
tdw04520
Adherens junction
tdw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130430155
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130430155
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130430155
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130430155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130430155
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130430155
04090 CD molecules [BR:
tdw04090
]
130430155
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130430155
Cell adhesion molecules [BR:
tdw04515
]
Cadherins
Major cadherins
130430155
CD molecules [BR:
tdw04090
]
Proteins
130430155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
130430155
NCBI-ProteinID:
XP_056615120
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All DBs
Position
1:3140033..3157065
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AA seq
1146 aa
AA seq
DB search
MEAMLTVRLGVFIFLIQALSCGFAEEFAGLKRAKRGWIIPPFNEPENSRGPFPKQLSQIK
SDYASETTMTYSITGEGADQPPVGLFICNRVTGFISVTQPLDREKKSFYQLIAYAIGEGN
IREKPMDIIINVIDQNDNRPVFTQNPFNGHVHDAAPKDYEFMKVTATDADNPETDNADVR
YSIIRQDPLLPKPNMFDINTITGGIRVIEEGLDRKKYPTYTLVIQAADMQGKGLRTMGKA
VITVTDINDNAPQFEQTMYEASVPENQVCAEVVKLTVTDGDDPGSSAWSTKYKIINGDKG
GFFKVSTGPSQLEGIITTVKPLDYEKTKQFILSVIVENVVVXALPTSTATVTVNVEDVND
PPEFKPKEKIIYKREDLAVDSELVTYTAVDPDTARSQKIIYKMGSDPSGWFNIVKETGVI
KVKKQMDRESGLVTDGKYKALFLAVDDDDKAPATGTGTLIVQLEDVNDNPPFIIEREIKM
CNHEAHPVLLTVKDKDAHPYAGPFSVEPQEETQKNWTAKMNDESTHIELMLSATLEPGIY
NVILRVLDQAGLFQDNTIRAIVCDCSGDDVICSETMPLDIEENKPYWFCTKDNPAYNGND
AFVVEEESTVRVLEIPREKCHRDLGPGSILNPGLTTCVLYPLGSVVVPWGVALGWHVGSA
GRSFLSSRIYKVNIRVIDQNDNKPIFTQNPFKGHVYDAATKDYEFMKVTATDADDPNTDN
GDVRYSIIRQDPPLPKPNMFDINTITGGIRVIEEGLDRKKYPTYTLVIQAADVRGTGFSS
TGTAIITVTDSNDNAPQFEQTMYEASVPENQVGAEVVKLTVTDGDDPGSPAWSTKYKIIN
GDKGGFFNVSTGPSQLEGIITTVKPLDYEKTKQFILSVIVENEDPFVRALPTSTATVTVN
VEDVNDPPEFKPEEKIIYKREDLAVDSELVIYTGLDPDTARSQKLTYRIGNDPAGWFNIV
KETGVIKIKMQMDRESGLVTDGKYKALFLAVDDDDKAPATGTGTLIVQLEDVNDNPPFIN
ERDINMCNSEARPAVFSITDKDGPPHAGPFRVNTRGETQKNWTASTNKIELMLKNTLEPG
IYNVILRVFDQGDEYQDNTIKAQVCDCKEKSLYAERERRQGFRCMEFSEMSLASWFCCRS
SCSSCS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaatgctaactgtacgactgggagtttttattttccttattcaggcactctcg
tgtgggtttgcggaagagtttgcaggactaaagagagcaaagagaggttggattattcca
cctttcaatgagcctgagaacagcagaggtcctttcccaaaacagctttctcagatcaag
tcagattatgcttcagaaactacaatgacgtacagtatcacaggtgaaggggcagatcag
ccaccggtgggccttttcatatgtaacagagttacagggtttatttcagtgacacagccg
ctcgacagagagaaaaaatctttctatcaactcatagcttatgctattggagaaggaaac
ataagagagaagccaatggatatcatcatcaatgtgattgaccagaatgacaataggccc
gtgtttactcaaaatcctttcaatggacatgttcatgatgccgctccaaaggattatgag
tttatgaaggtcacagccactgatgcagataatccagaaactgataacgctgatgtcaga
tactcaattatcagacaagatcctctattaccaaaaccaaatatgtttgatatcaacacc
ataactggagggattcgtgtcattgaagagggtctggatagaaagaaataccccacatat
actttagtaattcaggctgcagatatgcaaggaaaaggtttgagaacgatgggcaaggct
gttattactgtcacagacatcaatgataacgcacctcagtttgaacaaaccatgtatgaa
gcatctgtcccagagaatcaagtttgtgctgaagttgtcaagctcacagttactgatgga
gatgatcccggatcatccgcctggtcaacaaaatataagattataaatggtgataaagga
ggatttttcaaggtcagtactggacccagtcagctcgagggaatcatcaccactgtgaag
ccactggattatgaaaagaccaaacagttcattctgtctgtgattgttgagaacgtcgtt
gtcngcgctttgcccacatcaactgccacagtcactgtcaatgtggaggatgtgaatgat
cctccagaattcaaaccaaaagagaaaataatttacaaacgtgaagatctggctgttgat
tctgagttggtgacttatacagccgttgatccagacactgccagatcacagaagattatt
tataaaatgggcagtgatccctccggctggtttaatattgttaaagaaaccggagtgatc
aaagtcaagaagcaaatggacagagaatctggtttggtcacagatggcaaatacaaagct
ctctttctggctgttgatgatgatgataaagcaccagcgactggcacaggaactctgatc
gtccagctggaggatgtgaatgacaaccctccctttattattgaaagagaaataaagatg
tgtaatcatgaggcgcatccagttctcctcactgttaaagataaagatgcgcatccttat
gctggccccttcagtgttgagcctcaagaagaaacccagaaaaactggactgccaagatg
aatgatgagtcaacccacatagagctgatgctcagtgcaacactggagcccggcatctac
aatgtcatcctgagagttttggatcaggcgggcctgtttcaggacaacacgataagagcg
attgtatgtgactgcagcggagatgatgtcatatgcagtgagaccatgcccctggacatc
gaggagaacaagccgtactggttctgcaccaaggataatcctgcgtacaacgggaatgat
gcgttcgtcgtggaggaagagtccactgtgagagtcttagagattccacgggagaaatgc
catagagatctgggcccggggagtattctcaacccgggactcacaacatgcgtactttat
ccattagggagtgtggtggtgccatggggtgtcgctctgggatggcatgtaggttctgca
ggacgatctttcttatcatcgagaatttataaagttaatatccgtgtgattgaccagaat
gataataagcctatatttactcaaaatccctttaaaggacatgtttatgatgccgccaca
aaagattatgagtttatgaaggtcacagccactgatgcagatgatccaaatactgataac
ggtgatgtcagatactcaattatcagacaagatcctccattaccaaaaccaaatatgttt
gatatcaacaccataactggagggattcgtgtcattgaagaaggtctggatagaaagaaa
taccccacgtatactttagtaattcaggctgcagatgtgagaggcacaggtttttcatcg
acaggcacggctattattactgtcacagacagcaatgataacgcacctcagtttgaacaa
accatgtatgaagcatctgtcccagagaatcaagttggtgctgaagttgtcaagctcaca
gttactgatggagatgatcccggatcacccgcctggtcaacaaaatataagattataaat
ggtgataaaggaggatttttcaatgtcagtactggacccagtcagctcgagggaatcatc
accactgtgaagccactggattatgaaaagacaaaacagttcattctgtctgtgattgtt
gagaacgaggatccgtttgtccgcgctttgcccacatcaactgccacagtcactgtcaat
gtggaggatgtgaatgatcctccagaattcaaaccagaagagaaaatcatttacaaacgt
gaagatctggctgttgattctgaattagtgatttatacaggcctcgatccagacactgcc
agatcacagaagttgacgtatagaatcggcaatgatcccgccggctggtttaatattgtt
aaagaaactggagtgatcaaaatcaagatgcaaatggacagagaatctggtttggtcaca
gatggcaaatacaaagctctctttctggctgttgatgatgatgataaagcaccagcgact
ggcacaggaactctgatcgtccagctggaggatgtgaatgacaaccctccctttattaat
gaaagagacataaacatgtgtaatagtgaagcacgtcctgctgtcttctccatcacagat
aaagacggaccgcctcacgccggtccatttcgtgtcaacactcggggagaaacccagaaa
aactggactgccagcacaaacaaaatagagctgatgctcaagaatacattggaacccggc
atctacaatgtcatcctgagagtttttgatcagggcgacgagtatcaggacaacacgatt
aaagctcaagtgtgtgactgcaaggagaagagtttgtatgcagagagagagagacgacag
ggtttccgctgtatggagttctcagaaatgtcattggcatcttggttctgctgtcgctca
tcctgctcatcgtgttcatga
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