Triplophysa dalaica: 130431227
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Entry
130431227 CDS
T09616
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tdw
Triplophysa dalaica
Pathway
tdw03040
Spliceosome
tdw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130431227 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130431227 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130431227 (srsf5a)
Spliceosome [BR:
tdw03041
]
Common components
Common spliceosomal components
SR proteins
130431227 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
DUF4090
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
130431227
NCBI-ProteinID:
XP_056616112
LinkDB
All DBs
Position
11:5841237..5844960
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AA seq
269 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDYRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVEN
LSSRISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIEKLDGTDLNGRKL
KLYEDRKRNSRSRSRSRSRSSSRSRSPSRSRSPERGSKRSRSRSPSRTPEKKSNNRSPSR
SPSPAPRNQSRSRSRSRSRSRSASAESQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgcgtgttcatcggccggctgagcccccatgcccgtgaaagagacgtg
gagaaattcttcaaaggctatggccgcatccgggagattaacctgaagaacggttttggc
tttgtggagttcgatgactacagagatgcagatgatgcagtttatgagctaaatggaaag
gaactatgcagtgagagggtgaccatcgagcatgcccgctctcgccgtggaagaggtggt
ggcccaggaatggggggaggacgcttctctccacgttttggtggatatcgtcagtctcgc
agtgggggttccaggtatggcccaccagtgcgcacggagcacagaatcattgtggagaat
ctgtcttcgcgtatcagttggcaggatcttaaagacttgatgaggaaagtaggagaagtg
acctttgtggatgcacacaggaccaaaaagaacgagggggtggttgagtttgcttctcac
agtgacatgaagaatgccattgaaaagctggacgggactgatcttaacggacgcaaactt
aagctttatgaggatcgcaagaggaacagccgtagcaggagccgttcccgaagcaggagc
agctcacgttcccgttcgcccagtcggagtcgcagtcccgagcgtggaagcaaacgctca
cgcagccgctctcccagtcgcactccagagaagaagtccaacaatcgctcaccctcccgt
tctccctctcccgctccaaggaatcagagcaggagcagaagccggagcaggagcaggtcc
cggtctgcctctgcagagagtcagcactaa
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