Triplophysa dalaica: 130431841
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Entry
130431841 CDS
T09616
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130431841 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130431841 (herc4)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130431841 (herc4)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
HECT type E3
130431841 (herc4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
130431841
NCBI-ProteinID:
XP_056617026
LinkDB
All DBs
Position
11:complement(197325..210140)
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AA seq
1055 aa
AA seq
DB search
MLCWGNASYGQLGFGGIDEEIVLEPRKCEFFEGKRVRDVGCGRRHSVFLLEDGTVYTCGC
NDLGQLGHDKARKRPEQVVALDTQNIVSVCCGEAHTLALNDKGQVFAWGMASDGQLGLAN
TEECVRVPRTVKSLSEVSITQVTCGYWHSLALARGGQIFSWGQNKYGQLGLGSQGVSVCT
PQVIQSLQGVPFAQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLNDNDDRCFPALLKTLR
SQRVVYVCCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIA
CGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRMSPAPVKGCWRAHTDPVPMDTHGVS
DAAESFCVKRIYAGGDQSFAHYALPEDNVPPLDVRVCSPGGQICTLTSDLIQIWTRNTHG
RLSAEIANEIDLVFSSASCLNGSFLSTSNPGHYSTNSKCSGVDINMARLLYHRLIQHHDP
HVSQIIAASLEKNVLPRLSGSPPDVEALRLYLTLPECPLLNNPSNYTTLTIPFAKCVISL
KDAPLRVLGNWWSRLEPVVFQRLVELYKEVVVYLLRMQKLGISHSEQRIFTCFLHTSLKL
LEILHAVNERAGQIIQYDKFYIHELDELTDIRNDYVTWIQQQMFSGVVDSQVTLCKYPFV
FDAPAKTTLLQTDAVIQMQMAVDQAQRQNFTSLFLSGGGVESVNPCLILIVRRENVVGDT
MEVLRKSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLMMKELLDPKYGMFRYYEDSRLI
WFAHKTFEDIDLFHLVGVICGLAIYNLTIVELNFPLALYKKLLKKSPTLEDLKELMPDVG
RSLQQLLDYTEEDLEETFCLNFTVTEDNFGATEVLELIPNGMDISVNMSNRQEFVSAYVD
YIFNTSVAPQFMAFYAGFHKVCGGKVLELFQPSELQAMVIGNTNYDWKELEKSTEYKGEY
WADHPTIKIFWEVFHELPLEDKKKFLLFLTGSDRIPILGMKSLALVIQPTGGGGQYFPVA
HTCFNLLDLPKYTNKETLREKLLQAVEHNQGFNLV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttggggtaacgcgtcatacgggcagctgggtttcggtgggatagatgaggag
atagttctggagcccaggaaatgtgagttctttgagggaaagcgcgtgcgagatgtggga
tgtggcagacgtcacagcgtctttctgctggaggacgggaccgtctacacgtgcggctgt
aatgatctgggccagctgggacatgacaaagcacgcaagaggccagagcaggtggtggct
ctggacactcagaacattgtgtcggtgtgttgtggtgaggctcacactttggctctgaat
gataaaggacaggtgtttgcgtggggtatggcctcagatgggcagctgggactggcaaat
acagaagagtgtgtccgtgtacccagaacggtcaagagtttatcggaggtgagcattaca
caggtgacctgtggttactggcattctcttgctttagctcgaggaggtcagatattctct
tggggtcagaataaatacggtcagctgggcttagggagtcagggcgtttctgtctgtact
ccacaagtcattcagtctcttcagggcgttccgttcgcccagatatccgccggaggagct
cacagctttggactgactctgtccggcgccatcttcggctggggacgcaacaagttcggc
cagctgggtctcaatgacaacgacgatcgatgttttcctgctttactgaagactctcaga
tctcagcgagtggtttatgtttgctgtggagaagatcacactgcagcgctcactaaggag
ggaggtgtgttcacgtttggagctggaggttacggtcagctgggtcacaacagcacaaac
cacgaggtgaaccctaggaaagtgtttgagctcatgggaaatgtggtgacacagatcgct
tgtggaaggcagcacactttggcgttcatcccttcatcaggaaagatcgactccttcggt
ctgggaggaaacggacagctcgggacgcgctccacctgtaacagaatgagtcctgctcca
gtgaaaggctgctggcgagctcacacagatcctgtgcccatggacacccatggtgtttca
gatgcagctgagagcttctgtgtgaagagaatctatgctggaggagatcagagcttcgct
cactacgctttacctgaggacaacgttcctccgctggatgtgagagtttgtagccccggc
ggtcagatctgcactctcacctctgatctcattcagatttggacgaggaacacgcatggg
agactgtcagcagaaatcgcaaatgagattgatctggtgttctcctcggccagttgtctc
aacggaagctttctgtccacgagtaatccaggtcattacagcactaacagcaagtgctcg
ggtgtggacataaacatggctcgtctgctctatcacagactcatccagcatcatgaccct
catgtctcacagatcattgctgctagtttagagaagaacgtcctgcccaggttgagcggt
tctccaccagacgtggaagctttgagactttacctcacactgcccgaatgtcctctcctg
aacaaccccagcaactacaccacgctgaccattcccttcgccaagtgtgtcatcagtctg
aaagacgctccgctccgagtgctcggtaactggtggtccaggttggagccggtggtcttt
cagaggctggtggagctctataaggaggtggtggtgtatctgttacgcatgcagaagctg
ggcatctctcacagtgagcagagaatcttcacctgctttctacacacttccctcaaactg
ctggagatcctgcacgcggtcaacgagcgcgccggccaaatcatccagtatgacaagttt
tatattcacgagctggatgagttgactgacatcaggaacgattacgtcacctggattcag
cagcagatgttctctggagtcgtggactctcaggtcaccctgtgtaaatacccctttgtt
tttgacgcccctgccaagaccacgctgctccagacagacgccgtcatccagatgcagatg
gcggtggatcaggcgcagaggcagaacttcacttctctctttctgtcgggcggaggggtg
gagtcggtcaatccctgtctcatactcattgtgcggcgagagaacgtggtcggagacacc
atggaggtgctgaggaagtccaaaaacgtggattacaagaaacctctcaaggtgattttt
gtgggtgaagaggctgtagatgccggcggtgtgaggaaagaattctttctgctcatgatg
aaagagctcttggacccaaaatacggcatgttcagatactacgaagactctagactcatc
tggttcgctcataagacgtttgaagacatcgatctgtttcatctggtgggtgtgatctgt
ggtctggccatctataatctgactatagtggagctgaactttcctctagcactctataag
aaactgctgaagaaaagtccaacgctagaggacctgaaggagctcatgcccgacgtggga
aggagtcttcagcagctgctggattatacagaagaggatttagaagaaactttctgtctg
aatttcaccgtcacagaggacaactttggtgctacagaagtattagagctgatacctaat
gggatggacatcagtgtgaacatgtccaacaggcaggagtttgtctctgcttacgtggat
tatattttcaacacttctgtggctcctcagttcatggcgttctacgctggatttcataaa
gtgtgcggagggaaagttctggagctttttcagcccagtgaactgcaggccatggtcata
ggaaacacaaactatgactggaaagagttagagaagagcacagagtataagggggagtac
tgggcagaccaccccaccatcaagatattctgggaggtgtttcatgagctgcctctagag
gacaagaagaagtttctgttgttcctgacgggcagcgaccgaattcccattctaggtatg
aagagtttggcgctggtcattcagcccacgggcggcggcgggcagtattttcctgtagcg
cacacgtgcttcaacctgttggaccttcccaagtacactaacaaagaaacactgagagag
aaactgctacaggctgttgaacacaaccagggctttaatctggtctaa
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