Triplophysa dalaica: 130432003
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Entry
130432003 CDS
T09616
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130432003 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130432003 (polr1b)
Enzymes [BR:
tdw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130432003 (polr1b)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
130432003 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
130432003
NCBI-ProteinID:
XP_056617197
LinkDB
All DBs
Position
11:complement(3665095..3673751)
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AA seq
1132 aa
AA seq
DB search
MDLSKWCNLASAPSLKNLTEAGFGVPKKKQHVAVQDLVKAQIESFDQAVTDGLCRVVGAI
PPLEFMCKEERISLSYVEAVMHGPSVSKGGISKDMRVFPAECRGRRCTYRGKLVADVSWS
INGVPKGIIKQYLGQVPIMVKSKLCNLSGLSPKELIEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPITLCRPKFKSRGQGYTQYGISMHCVKEEHTAINMNLHYLDNGTVMLNFIYR
KELFFIPLGFALKALVDFSDFQIYQELIKGREENSFFQSCVSQMLRMVMDEGCTTKEKVL
NYLGERFRVKLNLPDWYTHKQCANFLLDECLCIHLKTDVEKFYMLCLMTRKLFSFAKQEC
MEENPDSLMCQEVLTPGQLYLMFLKEKMEAWLMSVKLVLDKRMQKLGELSAENLVKAFSR
APDLTKPFEYLLATGNLQSKTGLGMLQDTGMCVVADKLNFVRYVSHFRCVHRGAAFAKMR
TTSVRKLLPESWGFVCPVHTPDGEPCGLMNHLTASCEIVAPLYPTTTLPALLCSLGMTPA
DGTPGQPYSDCYPVLLDGAMIGWVERDMASSVAESLRRFKVLGEKKVPPWTEIVLVPQTG
KASLYPSLHLFTTPCRMVRPVRNLALGKQELIGTFEQVYLNVGIFECEIEKGVTTHQELF
PHSMLSVVAALIPYPDHNQSPRNMYQCQMSKQTMGFPLHSYQDRSDNKLYRLQTPQSPLV
RPVMYDHYNMDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTELIDLS
EKFRGEDSVVFGVTPNDPKVMNQLDADGMPFIGSVLKYGDPFYCCVNLNTNKSHVTFYKS
QEDCVVDNIKVCSNDNGTGRFKRVCITYRIPRNPTIGDKFASRHGQKGILSRLWPTEDMP
FTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLCHDATPFTFSEENSALEHFG
EMLKAAGYNYYGTERLYSGQSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTN
QPLGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRCVAQVCVDCGSLLSPLLEK
PPPEWSAMRNRKTVCLLCDKSDSIETVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatctctcaaagtggtgcaatttagcctccgctccgagtttaaagaatttgacagag
gcaggcttcggtgtcccgaaaaagaaacagcacgtggccgtgcaggaccttgtgaaagcc
caaatcgagtcgtttgatcaggctgttactgatggactgtgtcgtgttgtgggggctatt
cctccactggagttcatgtgtaaggaagagaggatcagtctgtcttatgtggaggctgtg
atgcacggtccatcagtctctaaaggaggaatcagcaaagatatgagggtctttcctgct
gaatgcagaggcagacgatgtacttacagaggaaagctcgtggccgatgtgagctggtct
ataaatggagtacctaaaggaatcatcaagcagtatttgggtcaggtgcctatcatggtc
aaatctaaactatgcaacctttccggtctctcgcccaaagaactcatcgagcatcacgag
gaagccgaggaaatgggcggatattttatcgtgaacggcatcgagaaagtgattcgtctg
ctgatcatgccgaggagaaactatcccattaccttgtgtagacccaaatttaagagcagg
ggtcagggctacacacagtacggtatttcaatgcactgtgttaaggaggaacacacagcc
attaatatgaatcttcactacctggataacggaacagttatgctgaatttcatttaccgg
aaagagctgttctttattcccttgggctttgcactgaaggctctggtagacttctcggat
ttccagatctatcaggagctgatcaaaggtcgagaggagaactcgttcttccagagctgt
gtctctcagatgctgcgtatggtcatggacgagggctgcacgactaaagagaaggtgctc
aattacctgggcgagcgtttccgggtcaaactgaaccttcccgattggtatactcacaag
cagtgtgccaactttttgttagatgaatgtttgtgtatccacctgaagacagatgtggag
aagttttacatgttgtgtctgatgacacgcaagctcttcagctttgccaagcaggagtgc
atggaagaaaaccccgacagtttgatgtgtcaggaagttctcacacctgggcagctctac
ctcatgttcctgaaagagaagatggaagcctggctgatgtctgtgaaactggtcttggat
aagagaatgcagaaattgggagaattgtctgcagagaatctggtcaaggccttttccaga
gccccagatctcaccaaaccttttgagtatttgttagccacaggaaacctccagtccaag
accggtctgggcatgctgcaggacacaggaatgtgtgttgtggcagacaagctgaacttc
gtccggtatgtttctcatttccgctgcgtgcacagaggagccgcctttgctaagatgagg
accacgtctgtgcgcaaactgctgccagagtcctggggtttcgtgtgccccgtgcacacc
cctgacggagagccttgtggtctcatgaatcacctgactgccagctgtgagattgtggcc
ccactttatcccacaaccactttgcctgccctgctctgttcactgggtatgactccagca
gacgggacccctggtcagccgtactccgactgttatcctgtcctactagacggggccatg
atcggatgggtggagagagatatggcgtcgtctgtggctgagtctctccgcaggtttaaa
gtgctgggagaaaagaaggtgccaccctggactgagatcgttctggttcctcagacgggt
aaagccagcctgtacccctctctccatctgtttactacaccctgtcgcatggttcggccc
gtccggaatctcgccctgggaaaacaggagcttatcggcacctttgagcaggtgtacctc
aacgtgggaatctttgagtgtgagatcgagaaaggagtcaccacgcatcaggagctgttt
cctcacagcatgttgagcgtggtggcagctttaattccctaccccgaccacaaccagagt
cccagaaacatgtaccagtgccagatgagtaaacagaccatgggcttcccgctgcactcg
taccaggaccggtctgacaacaagctgtaccgtctgcagaccccccagagtccgctggtc
aggcctgtgatgtacgaccactacaacatggacaattaccctatcggcaccaacgcgatc
gtggccgtcatttcttacaccggatatgatatggaggacgccatgattgtaaacaagtcc
tcgtgggagcgcggcttcgcccacggttctgtttataagacggagcttatagatctgtcc
gagaagttcagaggtgaggacagcgtcgtgtttggggtgacaccaaatgatccgaaagtg
atgaatcaactggatgcagatggaatgccttttataggctctgtgctgaagtatggggac
cctttctactgctgcgtcaatctcaataccaacaagagtcatgtgactttctacaagagc
caggaagactgtgtggtggacaatattaaagtatgcagcaatgacaatgggacaggccgc
ttcaaacgcgtgtgcatcacataccgcattcccaggaaccccaccatcggagacaaattc
gccagcagacacggtcagaagggtatcctgagtcggctgtggcccacagaggacatgccc
ttcactgagagcggcatgaccccggacatcctattcaaccctcacggattcccttccaga
atgaccatcggtatgcttatcgaaagtatggctggtaagtccggcgccctccacggcttg
tgccacgacgccacgcccttcaccttctccgaggagaattctgctctggagcactttggc
gagatgctgaaagccgcggggtacaattactacggcaccgagcggctgtactccggtcag
agcggcttggagctggaggcggacatctttatcggggtggtttactaccagcgcctgcgt
cacatggtttccgataagttccaggtgaggactacgggagcgagagataaagtcaccaat
cagccgttgggtgggaggaacgttcagggtggaatcaggttcggggagatggaacgagat
gctttgctggctcatgggtcttcgtttctgttacacgaccggctgttcaactgctcggac
cggtgtgtggctcaggtttgcgtggactgcggcagcctgctgtctccacttctggaaaag
ccgccacctgaatggtcggccatgcggaatagaaagaccgtctgcctgctgtgcgataag
agcgactccatcgagactgtgtccgttccgtatgtgttcagatactttgtagccgagctt
gctgccatgaacattaaagtcaaattagatgtcaagtaa
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