KEGG   Triplophysa dalaica: 130432066
Entry
130432066         CDS       T09616                                 
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
  KO
K08131  collagen type IX alpha
Organism
tdw  Triplophysa dalaica
Pathway
tdw04510  Focal adhesion
tdw04512  ECM-receptor interaction
tdw04518  Integrin signaling
tdw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130432066 (col9a1b)
   04518 Integrin signaling
    130432066 (col9a1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130432066 (col9a1b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130432066 (col9a1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tdw00535]
    130432066 (col9a1b)
Proteoglycans [BR:tdw00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   130432066 (col9a1b)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_1
Other DBs
NCBI-GeneID: 130432066
NCBI-ProteinID: XP_056617277
LinkDB
Position
11:4579051..4597065
AA seq 896 aa
MLPYSGVSHLQTDQTMCPQTIHGRDQFPGFYIMTQFNIAELARRGTVKMVPGTTSQHVAY
RIGPEFNFRINTRSAFPMGLPEEFAFSAVYRMTGNTPTKNWNLWQMQDMNRNEQLAVRLN
GESLSVEFSYRTQENRVMMVLFPHQTLLFDSQWHKILLVVKKGSVSVKTDCSESDSQQLA
PRGRVNLDGFTFIGKLKHNPAIAVTFELQSMLISCDTGFAQRDTCGELPARRQISEAEFQ
RVGGGPPGPPGVPGIDGIAGERGEHGEDGSTGPDGDDGKPGSAGLPGLPGGDGLTGPVGE
PGLDGPPGQKGEPGKSGPRGQVGVGPDGSIGPLGPGGLPGEQGKVGPPGAMGVRGPEGPR
GPTGARGAAGMLGGTMELCPNACSAGAPGHPGLPGMKGHKGVKADPGEPGKQGHKGEEGD
QGAPGDVGAQGPTGSQGTRGATGMIGSKGEMGPRGVDGEPGPQGVPGAVGDQGQRGGLGE
LGPKGEQGAQGPRGVTGLPGPKGDGGLPGVDAREGIPGIPGAKGNAGKGGAPGEIGLQGL
PGLPGSPGPKGTSGEKGNAGELGLMGTMGSAGRQGERGEQGEVGPVGPIGEPGDRGEQGP
SGPMGKPGARGPKGDLGLPGLPGPPGLPGVKGERGEGGEAGPKGEQGDQGAEGTAGDKGD
VGDPGQAGTKGEVGNQGDLGKRGSDGPRGQPGIEGPLGSPGPRGMQGDRGVPGPRGSQGG
AGKEPSDQHIKQMCMRVMQEQLAQLAASLRRPESGAAGLPGRPGPPGPPGSPGDNGFPGQ
AGARGLPGLKGPLGVLGLRGQKGEMGDRGDRGPTVRGPKGMHGPPGLPGEPGKPGYGRDG
RDGERGPPGVHGQPGVPGFPGPAGQPGYCDPSSCNLSAGAAHQSQKDSNLKGPGGN
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgctgccatattccggtgtgagtcacctacagacagaccaaaccatgtgtcctcagact
atacatgggagagaccaatttccaggtttttatataatgacacagttcaacattgctgag
ctcgccaggagaggaacggtgaagatggttcctgggacaacatctcaacatgttgcatat
aggattggcccagagttcaacttcagaataaacacaagatccgcatttcccatgggactg
cctgaggaattcgcgttttctgcagtttatcggatgaccgggaacacgccgactaagaac
tggaatttatggcaaatgcaagacatgaacagaaatgaacagcttgcagtgagactcaac
ggagagtcgctgtctgtagagttctcctacagaacccaagaaaacagagttatgatggtt
ttattccctcaccaaacactcctgttcgattctcagtggcacaagattttgctagtagtc
aaaaaaggttctgtgagcgtaaaaacagactgcagtgagtcagactctcaacagctggca
ccacgaggacgcgtaaatctagatggattcacgtttattggaaagctgaagcacaatccc
gcaatagctgtgacgtttgagttgcagtcgatgcttatcagctgtgatacaggattcgca
cagagagacacctgcggtgagcttcctgccaggagacagatatctgaagcagaatttcag
agggtcggaggcggccccccgggtccaccaggtgtgcctggaatagacggcattgctggg
gagagaggcgaacatggcgaagatggctctaccggccctgatggtgatgatggaaaaccg
ggttctgctggacttcctggtttacctggtggtgatgggttgactggccccgtaggagag
cccggtctcgacggcccaccaggacaaaagggagaacctgggaaatctggacccagagga
caagttggagttggacctgatggatctatcggaccactaggaccagggggacttccgggt
gagcagggaaaagtgggaccccctggggccatgggtgtaagagggccagagggaccccgt
ggaccaacaggggcccgtggtgctgcagggatgttgggtggaactatggaattgtgtcct
aatgcatgctcagctggtgcaccgggccatcctggcttgcctggcatgaaggggcataaa
ggagtgaaggcagatccaggagagcctggtaaacaaggacacaagggagaggagggagat
caaggggctcctggagatgtcggagctcagggtccaactggatcccaggggactcgaggt
gccactggaatgataggctcgaaaggagaaatggggcctcggggtgttgatggtgagccc
ggtcctcagggtgtgccaggtgccgtgggggatcaaggtcagaggggaggtttgggagaa
ttgggccctaaaggtgaacagggcgctcaagggccaagaggtgtcaccggtcttccagga
ccaaaaggagacggcggtttgccgggtgtagatgcgcgtgagggtattcctggcatacca
ggagctaagggcaatgctggaaaaggaggagctccaggagaaataggccttcaaggactt
cctggtttaccaggaagcccagggcctaaaggtacatccggagaaaagggtaatgctgga
gagctcggcctcatgggcactatgggatcagcaggcagacagggagagcgtggagaacaa
ggagaggttggacctgtcgggcctattggtgaacctggagaccgtggagagcagggccca
tctggaccaatgggaaaaccaggagccagaggtcctaaaggtgatttgggtttgcctgga
cttcccggaccgccaggccttccaggagtaaaaggcgagcggggtgaaggaggtgaagct
ggacctaagggagaacagggagatcaaggagcggagggaacggcaggagacaaaggagat
gttggcgaccctggccaagccggaactaaaggcgaagttggcaaccagggagatttgggt
aaaagaggctcagatggaccccgcgggcagcctggcattgaaggacctcttggtagcccc
ggaccacgtggcatgcaaggggacagaggggtcccgggacctcgtggctcacaaggggga
gcgggtaaagaaccaagcgatcaacacatcaaacagatgtgtatgcgggtgatgcaggaa
cagctggcccagttggccgccagtctgagaagaccagagtctggtgcggctggactgcca
ggccggccaggtcccccaggtcctcccggatctccaggtgacaatggatttcctggacaa
gctggtgcgagaggactgcctggactcaaagggcctctgggagtgctgggtttaaggggt
cagaaaggtgagatgggagacagaggggacaggggacccacagttcggggacccaaaggc
atgcatgggcctcccggtctaccaggtgaacctggaaaaccaggatacggtcgggatggc
cgtgatggggagcgagggccacccggtgtgcacggacagccgggtgttcctgggtttccc
ggtccagccggccaacctggttactgtgacccttcatcttgtaatctgagcgccggggct
gcccaccagtcccagaaagactctaatctgaagggcccaggaggaaactaa

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