Triplophysa dalaica: 130432151
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Entry
130432151 CDS
T09616
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
tdw
Triplophysa dalaica
Pathway
tdw04080
Neuroactive ligand-receptor interaction
tdw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130432151 (gabrb1)
04082 Neuroactive ligand signaling
130432151 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130432151 (gabrb1)
Ion channels [BR:
tdw04040
]
Ligand-gated channels
GABA-A
130432151 (gabrb1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
130432151
NCBI-ProteinID:
XP_056617393
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Position
11:14118867..14133922
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AA seq
484 aa
AA seq
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MMRGMLSAWTHWPAGIFCLHMFVVLTFGRSPPANSVNQHSNMSYVKVTVDKLLKGYDIRL
RPDFGGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRV
ADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDE
QNCTLEIESYGYTTDDIEFYWQGGSSVTGVENIELPQFDIIDYNILSKKAVFATGSYPRL
SLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHL
RETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVSEKAAKSNYEK
SRMDGNKVLVDVHGNIPLTHLDLRLSGPEMLGALGDPRNTMFSYDSASIQYRRPLTGRDL
YGRPPASLERPIQRKKNRLRRRVAQLKVKIPDLTDVNAIDKWSRVIFPIAFTFFNLVYWL
YYVQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagggatgctgagcgcgtggactcactggcccgctgggatcttttgtctccac
atgtttgtggttttaacgtttggccgaagcccgccggcgaacagtgtgaaccagcacagc
aacatgtcatacgtcaaagtcaccgtggataaactactcaagggctacgacattcgtctc
aggcctgatttcggaggtcctccggttgatgtcggtatgagtattgatatctccagtatc
gacatggtgtcggaagtgaacatggactacaccatcaccatgtatttccagcagtcctgg
cgtgacaaacgtctgtcctacacagggatccctctcaatctcactttagacaaccgagtg
gctgaccaactttgggtgcctgatacgtacttcataaatgacaaaaaatctttcgttcat
ggggtcacagtaaagaatcgtatgatccgtttgcaccctgatggaactgtgctctatggt
ctcaggataactaccacagctgcgtgtatgatggatctgcgcagatacccactggatgag
caaaactgtacactagagattgaaagttatggatacaccacagatgacattgagttttac
tggcagggtgggagttcagtgactggcgttgaaaacattgagctgccacagttcgatatc
attgactataatatactgtctaaaaaagctgtgtttgccacagggtcgtaccctcgtctg
tcccttagttttaaactaaagagaaacattggatatttcatccttcagacctacatgcct
tcgaccctcatcaccatcctgtcctgggtctctttctggatcaactatgacgcttcagca
gcaagagttgcgctaggaatcaccactgttctgacaatgaccacgatcaacactcatctt
agggagacattacccaagatcccttatgtgaaagccatagacatctatctgatgggctgc
tttgtcttcgtgtttctggctttgcttgaatatgcctttgtcaactacatcttctttggc
cgcgggccacacttacagaagaaagtgtcggaaaaagctgccaaaagcaactatgagaaa
agtcgaatggacggtaacaaagttctggttgatgtccatggaaacatccccctcacacac
cttgatctgcgtcttagcgggcctgagatgctaggtgccctcggggacccaaggaacacc
atgttctcttacgacagcgccagcatacaataccgcaggccccttacaggtcgtgacctc
tacggtcggccccccgcctctctcgagaggccaatccagcgcaaaaagaatcgtctgagg
agacgtgtcgctcagctgaaggtgaagatcccagacttgacagatgtaaatgccatcgac
aaatggtcccgtgtcatctttcccatcgccttcaccttctttaatctggtatactggctg
tattatgtccagtag
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