Triplophysa dalaica: 130432242
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Entry
130432242 CDS
T09616
Symbol
tarbp1
Name
(RefSeq) LOW QUALITY PROTEIN: probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdw03016
]
130432242 (tarbp1)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130432242 (tarbp1)
Enzymes [BR:
tdw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
130432242 (tarbp1)
Transfer RNA biogenesis [BR:
tdw03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130432242 (tarbp1)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130432242 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
DUF5946
Motif
Other DBs
NCBI-GeneID:
130432242
NCBI-ProteinID:
XP_056617519
LinkDB
All DBs
Position
11:complement(4526528..4544489)
Genome browser
AA seq
1595 aa
AA seq
DB search
MSRFLINTLLSHCHDPGNLIQTLRWQSTSSPDIDKIEALTTLIQELSTDSHSAREERFIC
EVQSVIWDQCMPLLKMISSEDDGGKDLLSAVCGLFAACVRVCQTDVHEQVCQILLPVLMM
RDDGSHETRRFDVDVAIEATAVLLSSISENRSIISKTLSCTLGCIKDLSDSKVSKIIVRI
WFTILKSCSKPEESETLHQIWEDLMAWHHRDRTESVTARVLLCLTALSDHVFSLGSDSSC
NRPEPTRSQWFFRAIQAGLTHRDSVTRKRALYLLTRCVALADARREDVGTCQTPGTEKIL
FKWTSEKKLLLRGFWEDYALILETLEENQIHVIRPVLNRIDKLVETTSTDVEDGLFSPSW
LLCVYQRMFYSENKAVMKEGVNHLLELKALHHPGFALAFSQFIVGPLMDVLAESSLYHRS
AQQNIRDCPELGKKLQTFMVNFFNGLPEENKGSVLLQFIQRLGSRHWCAVPLLFLSQALS
CLSLRPLLNSDGLQAFREVLRCAMITHQVLLRGASQCFLLHAALSLTDVSAVSLNEVLSF
LVCFRAEESLCRGTTLWMELCDWLRRNENRFRLTDGDSGSSEKLHDKTSNGNRTSLFSHV
RQRLKTFLTVPASSDQTGSVSDPSEAELLARAVLLSADLQQSKTEPKEIAGLEELLQPLL
DILHRLSTNVYLLQHKTDKSLQLLLRLLQLRGRAEDPEKEDAVAVALKTQVLSAVESVQD
FLLRRLSCELREFCDLERAELYLSVLRELVLTYSSVSWYGSNLQQNYIPKLTTNCLEILN
EPSHQKPFVSGQVQRVVSMATLALLCDIAGGGVWNSGSEAMRSLHSLTDYFYSSSSSLQH
LNQTLPKPTSASDPSVSPEDSPVLKDWGRIVAQFIRDQWMCLSFLQKSFPAGHLKAPEAT
EILRAAVEALALLPGHLVLPVLDYMTTVLPQVVQSDESLCVDVICASWKVVQALSTNPHD
FWSTLQGFVRLAFNRKLLELTDEQNPQITACVQQIVNELMDLAQVRSGVYNVLIQHCCDM
WLPSGAEKGVQTDVVFSSALSHLSILTEACVYGPVFRRDQRLIQEVQSYVEQLGDSCAAN
TAINSDNRDDQFPRMCVLAFLCHLNPSNQLHQRVMQEVVQRLLKKDAEISKSKVRYYSNS
IQHRVKNRVWQTLLLLLPKLRAEFVSEFVLSHVCEAGFCSNQASVKYLIEWTLILILHQY
PSHIHSLWDCFSLDHEKTKTSICAFLSVLVHLNILLPKLDEKQVHWRRAMEVILQWCFCH
NFSVRLYALLALKRVWXLKDADVLSEENLGGLSTVVQACLNQAEAMQNTGNALKNWTRIQ
EHFFFGVFHPIRDYSVETIFETFPRLSELAEDEWLPVWKFECFGNFPSCASLPLKNPVMD
LSEHQPGDWIQQDKGEMEQEERWAEVQKKITPWKLSVQEQEPELMAQQRAARLGKLTSAL
LVVASLIDKPTNLGGLCRTCEIFGAKGLVLDSLRHVNDKQFQALSVSSELWLPLLEVKPA
ELSDFLQLKKREGYWVIGVEQTSNSQNLQDYTFPERSLLLLGNEREGIPANLLQLVDVCV
EIPQQGITRSLNVHVSAALLVWEYTRQHLGPSIGP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttttttgataaacactcttttgtcccactgtcacgatcccgggaatttaatc
caaactctccgctggcaaagtacttcttcgcctgacattgacaagattgaagctttaact
actctgatccaggagctttccacagattcgcattcagcacgagaggaacgtttcatttgt
gaggtgcagtcagtgatatgggatcaatgcatgccactgttgaaaatgatctctagtgaa
gatgatggaggtaaggacctgctcagtgcagtgtgtggactgttcgcagcatgtgtccgt
gtatgtcagactgatgtgcacgagcaggtgtgtcaaattcttctccctgtacttatgatg
agagacgatggcagtcatgaaacgaggaggttcgacgtggatgttgctattgaagccact
gctgttttgctatccagcatctcagaaaacagatccatcatctccaagactctgtcctgc
acacttggctgtattaaggatctgtctgactccaaggtgtccaaaataatcgttcggatc
tggttcaccatactgaagtcctgcagtaaaccagaagaatcagaaaccctgcatcagata
tgggaggatttgatggcatggcatcacagagaccggacagaatcggtaacggctcgggtt
ctgttgtgccttactgctctatccgatcacgtcttctctttgggatcagactcatcctgc
aatcgccctgaacccacgagatcgcaatggtttttcagggcgatccaggccggactgaca
cacagagacagtgtgacccgcaaacgggcgctttacctgctcacccggtgtgtggcactt
gcagatgccaggagagaagatgtggggacctgccagacacccggcacagaaaagatcttg
tttaaatggacatcagagaagaaactgctgttaagggggttctgggaggattatgcatta
atattagagacacttgaggaaaatcagattcatgtgatccgacctgtactcaacaggatc
gataagcttgttgagacaacctcaaccgatgtggaagatgggctgttttcaccttcctgg
ttgctgtgcgtatatcagcgcatgttttacagcgagaacaaagcagttatgaaggaagga
gtcaatcacctgttagagctgaaagcgctgcatcaccctggatttgctttggcattctca
cagtttatagtcggtccactcatggatgttcttgcagagagctctctatatcacagatca
gctcagcagaacatcagagattgcccagagctgggaaagaaactgcaaacctttatggtg
aatttcttcaacggtttgccagaggagaataaaggctcagttttgctgcagttcatccag
cggttgggttcacgacactggtgtgccgttcctctgctcttcctgtctcaggctctgagc
tgtctgtctctgcgtcctctcctcaactctgatgggctccaggcattcagagaagttcta
cgctgtgctatgatcactcatcaggtgctgttgagaggagcttcacaatgttttctgctt
catgccgccctctctctgacagatgtgtcagcagtatctttaaatgaggttttgagtttc
cttgtgtgttttcgagctgaagagtcgctttgtcgtggcacaactctgtggatggagctt
tgtgattggctgcggaggaatgaaaaccgttttcgtttgactgacggggattcaggttcc
tctgaaaagcttcatgataaaacatcaaacggtaacagaacttctctattcagtcacgtc
cggcagcgactgaagaccttcctcacggttccagccagctcagatcaaacagggagtgtg
tctgatccatcagaggccgagctgctggcccgggccgtcctgctgtctgcggacctgcag
cagagcaagaccgaaccgaaggaaattgctggtctagaagagctcctgcaaccgctgctg
gacatcttgcacagactcagcaccaacgtctacctgctgcagcacaagacagataaaagc
ctgcagctactactgcgactgttgcagcttcggggaagagccgaagatccagagaaagag
gatgctgtggctgttgctttgaagacgcaagtgctgtcggcggtggagtcggtccaggac
tttctgctgaggaggttgagctgtgaactgagggagttctgtgatttggagagggctgaa
ctttatctctcagtattaagagagctggttctgacttactccagtgtgtcatggtacggc
tcaaatctgcagcaaaactacatccccaaactcaccacaaactgccttgagatcctcaat
gaaccttctcaccagaagccgtttgtatcaggacaggttcagagagtggttagtatggcc
acgcttgcactgctgtgtgatattgcaggtggtggtgtatggaactccggttccgaggcc
atgagatctttacactcactgaccgactacttctactcttcatcatcatctcttcagcat
ctcaaccagacgttaccgaagcccacatctgcgtctgatccctcagtcagtccagaggat
agccctgttctgaaggactggggacgaatcgttgctcagtttattcgagaccagtggatg
tgtctgagtttcctgcagaagtcttttcctgccgggcacctgaaggcccctgaagccact
gagatcctgcgggctgccgtcgaggctctggccttactgcctggtcatcttgtgctgcca
gtgctggactatatgacgacagtcttaccacaggtggtgcagtctgacgagtctttatgc
gtggatgtcatatgtgcatcatggaaggtggttcaggctctgagcacaaaccctcatgac
ttctggtccacactgcagggatttgtgcgtttggcttttaatcggaagctgctagagctg
acggatgagcaaaacccccaaattactgcctgcgttcaacagattgtgaatgagctcatg
gatttagctcaggtccgctccggtgtgtataatgttctcatccagcactgctgtgacatg
tggttgccttctggggcagaaaagggagtccagacagacgttgtgttcagctctgccctc
tcacacctcagcattctcactgaagcctgtgtatacggccctgtgtttagaagagaccaa
agactcattcaagaagttcaaagctacgttgagcagcttggtgatagttgtgccgcgaac
acggccattaacagtgataacagagacgatcagtttcctcgcatgtgcgtcctggctttc
ttgtgccatctgaatccgtccaatcagcttcaccagcgtgtgatgcaagaggttgttcag
agactactaaaaaaggatgccgagatctcaaaatccaaagtacgttactatagcaactcc
atccagcacagagtgaagaaccgcgtgtggcagacgctgctgctgttactgcccaaacta
agagcggagtttgtatcagagtttgtcttgagtcatgtgtgtgaggctgggttctgcagt
aaccaagcgtcagtcaagtacctgatcgagtggaccctgatcctaatcctccatcagtac
ccgtctcacatccacagcctgtgggactgcttcagtctggatcacgagaagacgaaaaca
agtatctgcgcatttctgtctgtcctcgtgcatttgaacatcctcctcccaaaactggac
gagaagcaggtgcattggcggagagccatggaggtgatcctgcagtggtgcttctgccac
aacttcagcgtccgtctgtacgcccttcttgccctcaagagggtttggnagctgaaagac
gctgatgtcctcagtgaggagaatctgggtggtctgagcacggtggtccaggcctgtctg
aaccaggctgaagccatgcaaaacacaggcaatgcgttgaaaaactggactagaatccag
gagcatttcttttttggtgttttccatccaatcagggattacagtgtggagacaatattc
gagacctttcctcgcctctcagagctggcagaagatgaatggcttccggtgtggaaattt
gagtgcttcggtaactttccctcgtgtgcgtcgctgcctttgaagaaccctgtgatggat
ctgagcgaacaccagcctggagactggatccaacaggataaaggtgagatggagcaggag
gaacgctgggcagaagttcagaagaaaatcactccatggaagttgagcgttcaggagcag
gagcctgagctcatggcccagcagagagcagcacgcctgggcaaactcaccagcgccctc
ctggtggtcgcatctctcatcgacaagccaaccaatttgggtggtctgtgtaggacatgt
gagatctttggagctaaaggtctggttctggacagtctgagacacgtgaatgacaaacaa
ttccaggcgctcagtgtgtcctcagagttgtggctgccattgctggaggtgaagcctgcc
gagttatcagacttcctgcagctgaagaagcgagagggatactgggtaataggtgtggag
cagacatccaacagccagaatttacaagattacacgtttcctgagagaagccttttgcta
cttggtaatgaaagagaaggcatccctgcgaacctgctgcagctggtagatgtgtgtgtg
gaaattcctcagcaaggtatcactcgttccctcaatgtgcacgtgagcgccgccctgctg
gtgtgggaatatacccggcagcatttaggaccaagcattggaccataa
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