Triplophysa dalaica: 130432368
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Entry
130432368 CDS
T09616
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130432368 (lingo4b)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130432368 (lingo4b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
Ig_2
V-set
LRR_EndoS
LRR_Zer-1
C2-set_3
C2-set_2
LRRNT
Motif
Other DBs
NCBI-GeneID:
130432368
NCBI-ProteinID:
XP_056617679
LinkDB
All DBs
Position
12:5404933..5415300
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AA seq
605 aa
AA seq
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MLKEQCGMWGGWTVLLLWSLNLSGADFTCPLKCVCYQDTLEANCSSKHLTGVPDGLPNNV
KRLDLSGNQLKTIARRQFSGLSKLEDLNLGENIISMIEVEAFQGLKNLRYLRIKNNRLKI
LPVGVFSGLTNLRRLDISENEILVFLDFTFREMVNLQQLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQCLTKLRLRKLTIGVLPNNAFRGLNQLRTLLILHWPSLE
TLNSNSLVGLNLTTLTLTNCNLSAVPYASLRHLVYLQYLDLSYNPISSIQGNLLGELVRL
QELHLVGGNLLRIETGAFRGLVQFRLLNVSSNRLSTLEEGVFHSVGILQTLRLDRNPLAC
DCRLLWVVRRRRRLDFDGRQPTCSVPNQVYRKAFRDFSEAELPVIFVCRQAQILNRQLQD
ASVVEGTNVQFNCKADGYPSPSVTWLSAQQTSLSSVGRIRALANGSLEVRYAQVQDSGTY
LCTAANAAGNDSITVSLQVEGLPQNRTASYFSDMGWTETSLPPSTNSSARASSPYPFDAK
TLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRF
TMKLI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggaacagtgtggcatgtggggtggatggacagtcctcctgttgtggtcctta
aacctttcaggagctgacttcacctgtccgctgaaatgcgtttgttaccaagacacgctg
gaagccaattgctcctcaaaacacctgacaggtgttcccgatggcctgcctaataacgtc
aaacgtctagacctttctggaaaccaactgaaaacgattgccaggcggcagttctccggc
ttgtcaaagttggaggacctgaacctgggtgagaacataatatctatgattgaggtggaa
gcgtttcagggactaaagaatctaagatacttgagaattaagaacaaccgtctcaagatc
ctcccagtcggggttttctctggcctcaccaaccttcgccgtctagatattagtgagaat
gagatcctagtgtttttggatttcaccttcagagaaatggttaacttacaacagcttgat
gctggtgagaacgacctggtgttcatctcacaacgggcgtttgttgggttgcaggccctg
aaggagcttaacgtggaccgtagcaatctgacctctatccccacagaggctctctcccaa
ctgcagtgcctgactaaactgcgacttcgcaaactgaccatcggcgtcctacctaataac
gcatttcgtgggctgaaccagcttcgtaccctgctgatccttcactggccttctcttgag
acgctcaacagtaacagcctggtgggcctgaaccttacaactttaactttgaccaactgc
aatctcagcgctgtaccctatgcttcccttcgccatctggtctatttgcaatacctggac
ctgtcctacaaccccatcagctcaatacagggtaacctgctgggggagcttgtccgactg
caagagttgcacctggtaggtggtaaccttctacgcatcgaaacaggtgccttcagaggt
ctggtccagtttcgcctgctcaatgtgtcttctaaccgactgtctaccctggaagaaggc
gtcttccactctgtgggcatcttgcaaacattacggcttgaccgaaacccattggcttgt
gactgtaggctactctgggtggtgcgccgtaggcggcggctggacttcgatggtcgccaa
cccacctgttcggttcctaatcaggtgtacaggaaggcattcagagacttttcagaagct
gaactcccggttatatttgtgtgcagacaggcacagattttgaaccgacagctgcaggat
gcaagcgtggtggaaggcacgaacgtacagtttaactgcaaagcagatggctatccatcc
ccttcggtaacctggctgtcagcccagcagacttcgcttagctctgtcgggagaatacga
gcactcgctaatgggagccttgaggtgcgttacgctcaagtgcaagacagcggaacgtat
ctgtgtaccgcagctaatgcagccggtaacgacagcatcaccgtgagccttcaagtggaa
ggtcttccgcaaaaccgcacagcatcgtatttctcagacatgggatggacggaaacttca
ttacctccctccaccaactcctccgcacgagcatcaagcccttatcccttcgatgcgaaa
acccttatcatcgccaccaccatgggctttctgtcttttctcagctccgtggcaatttgt
ttcgtgtttatgttcttctggagtcagagcaaaggtcaaatcaaacacactgccactata
gactttgtgccacggtcgtccatgggtggaggtggagatggtggagatacaggaaggttt
acaatgaagcttatttga
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