Triplophysa dalaica: 130432401
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Entry
130432401 CDS
T09616
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130432401
Membrane trafficking [BR:
tdw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130432401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
SPA
COPI_C
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
130432401
NCBI-ProteinID:
XP_056617716
LinkDB
All DBs
Position
12:complement(23221897..23245643)
Genome browser
AA seq
1486 aa
AA seq
DB search
MSSDERCPQLVDYFVVAGLAGDCCPLDEDGRERGTRAVQPVTDVAVIARGLGEDVPEGFT
CIEKTLGGHPAELSANLLNNPHMFLCYRRGHDKPPIIELGVLYEGKDPTRPGWFVIETTP
YSRSASLTSGGPTTHRTFLMYRRAPDSQALNTLGVTEITLLMPSKGETAPHTYCRVDKNL
NTGMWGPALYLCYKRSVAKANTLVYEAGLISRYPEEDLESFPLPDSVPVFCLPMGVTVES
WPINTKYQLPVFSTFVLTSASGDKVYGAAIQFYEAYGRERLSERQCVHLGLLSVLDRRPI
TNRSLQVKKSICVLSHWPFFSVFQKFLTFIYRYSISGAHVLPLEKHLSSFMHNVPFPSAQ
RPRILVQLSPYDNLLLCQPVSSPLPLSGASFVKLLQNLGPENACTLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWPCPYIPLCPLRMADVLCAPMPFIVGVHSSYFDLYDPPS
DVVCVDLDTNTIFQCEEKKPLTWRSLPRKHGKTLLTSLSNLHKTLESIYTPGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRSFLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTQQKFYTQLTRTQVFTQFVEECSFVSDRHTSLEFFDECVQKVDVDKPELVRLI
DLDESHSGEHTVFIMPPEEPQEADGSECQAHYSYDTFPILRSDLFDRPQDQLRTPAKGSA
PSSPAPRRTKQEIKLAQQKAQKYSAVPDMWSKCLLGHCYGLWFIYLPTFVKAESTKVRAL
HTAYEVLKHMETRRVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYGY
YNKAILESKWPSTNQGSRLRWTKLRNVILAVAQFRQPIKEQQRNTSFCTRTEDTLSKPRP
YSALIRQSSWSGLSESSSHESLTSLTKSNSVSSMQTSVSKNKHCKNTEPQAVGADASRKP
PAGRRDIAPPLLPPPAPPLVRRSDVCLSTFYKDCAEMTDADCRCQTADRDSRSVEVRETL
NRRSVDENYNNVSSPSRRLAGKLQQLLTPTRNRASVRRAASVDDRRPGATGTSRRTLEQK
SSRKIHMPESLLKAKERLYNATSESSLSVSSDVDMTDIQTLTVPLRKSWDSAQEAAGIEV
LMSSCSLCRGCNSLVYDEEIMAGWSSDDSNLNSTCPFCSASFVPLLNAEICDVGPVCSVE
RILNVEGEVENGVRPPAGREDAQQHVCNGIREAESSSDTSSQSESSSPTRVSSGGGAPQV
TVAYLSPLVLRKETESLLENEGEAVLSQVQLLDSHPILFWNLVWYFTRLGLPSNLPQLLR
ESPLTAHCTQVSEGSGVRVRLLWDMLTPDPEQWPPLYIIWRMHSGAALRTSSWRHHNHPF
TLRFLEEVLRWVGMNEVHKAITLFLDTVAKQPGTPRIQRSLYREMLFLTVAAMGKDHVAA
FDKRYKAAYLRLSGSLGRDELRRKRVQPPSTKAVDCRRCFLLPLEC
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagacgagagatgtcctcagctggtggattatttcgtggtggccggtttagcg
ggtgactgttgtcctctagatgaagacgggcgtgagaggggcacccgggcggttcagccc
gtcactgatgtggccgtgatcgctcgtgggcttggtgaagacgtgccggaaggtttcacc
tgcatcgagaaaacacttggaggtcatccggcagaactgagcgccaatttactgaacaac
ccgcacatgttcctgtgctacagacgaggacacgacaaaccgcccatcatcgagctcggt
gttctgtatgaagggaaagaccccacccggccaggatggttcgtgattgagacgacaccg
tacagccggtcggccagcctcacttctggtggtcccacgacccaccggacgttcctcatg
taccgcagagcaccagactcacaggctctcaacactctgggtgtcactgagatcacactg
ctcatgcccagcaagggtgaaaccgcaccgcacacctactgcagagtggataagaacctc
aacactggaatgtggggtccggcgctgtatctctgctacaagcgttcggtggctaaagca
aacactctggtgtatgaggcgggtctgatcagtcggtaccctgaggaggatctggagtct
tttcctctgcccgactctgtgcccgtcttctgtctcccgatgggcgtgactgtagagagc
tggccaatcaacaccaagtaccagctgcccgtcttctccacctttgtcctcacgagcgct
tctggagataaggtgtacggtgctgccatacagttctatgaggcgtatggccgcgagcgt
ctgtccgagcgtcagtgtgttcatctgggtctgttgagcgtgctggaccggcggcccatc
actaaccgcagtctgcaggtgaagaagagcatctgtgtactgtctcactggcccttcttc
agcgtcttccagaagtttcttaccttcatctacagatactccatctctggagctcacgtg
ctgccgctggagaaacatttatccagcttcatgcacaatgttccgttcccgtcggctcag
cggcctcgtatcctggtgcagctctctccatatgataatctgctgctgtgtcaacctgta
tcatctccactgccactgagtggggccagcttcgtgaagttgctgcagaatttagggccg
gagaacgcgtgtacgctgctgctggccgtcctgacggaacacaagctgctcctgcattct
ctgcgacccgacgtgttgacatctgtcagtgaggcgctggtgtcgatgacgtttcctctg
cgctggccctgcccgtacatccccctgtgcccactgcgcatggcagacgtgctctgtgcc
cccatgcccttcatcgtgggcgttcactccagttactttgacctgtacgaccccccgtct
gacgtggtgtgtgtggatctcgatacaaacaccattttccagtgtgaagagaagaagccg
ctcacctggagatctctgcccaggaaacacggaaaaactctgctgacatcactgagcaac
cttcacaagaccctggagagcatctatactccgggtcaggaagaggccactctggagttc
ttgttgacggattatgatctgatttacggccgtcagaaacagctggagctggagattcag
gaagcgtttcttcgtttcatgagctgtttgttgagaggatacagatcttttcttctgccc
atcacacaggcgccatcagacagaaccacggactgcagttcactctttaacctacagggt
tttctgaagtctcgtgagcgcacgcagcagaagttttacacacagctcacaaggactcag
gtgttcactcagtttgtagaagaatgttcattcgtcagcgacagacacaccagccttgag
ttcttcgatgagtgtgtacagaaggtggacgtggataagcccgagttggtgaggttgata
gatctggatgaatctcacagcggtgaacacacagtgtttataatgcctccagaagaacca
caggaagccgacggctctgagtgtcaggcacattacagctatgatacgttccctatcctc
cgctcggatttgtttgatcgtcctcaagatcagctgcggacaccagctaaaggcagcgct
cccagtagccccgccccccgccgcaccaaacaggaaataaagctggcacagcagaaggct
cagaaatattcggcggttccggacatgtggtccaaatgtctgctgggtcactgctacggt
ctctggttcatctacctgcccacgtttgttaaagctgagagcactaaagtcagagcgctg
cacacggcctacgaggtcctcaaacacatggagacacgcagggtggttctgccggatgaa
gtgtgttaccgtattctcatgcagttgtgtggtcagtacggacagcccgtcctcgccgtc
agagttctgttagagatgaagaaagcaggaatcactcccaacaccatcacgtacggatac
tacaataaagcaattttggagagcaagtggccttccaccaatcagggcagtcgtctccgc
tggacgaagctccgtaacgttatattggctgttgctcagttccggcagccaatcaaagag
cagcagaggaacacgtctttctgtacccggacagaagacacactgtcaaagccccgcccc
tactctgctctgattcgccagtccagctggagcggtttgagtgaaagctcaagccacgaa
tcactgacgagtctcacgaagagcaacagtgtgagcagcatgcagacgtcagtcagcaaa
aacaaacactgtaagaacaccgaaccacaggccgtcggcgctgatgcctcccgcaaacct
cccgccggtcgccgtgacatcgctccgcccctgctccccccccccgcgccccctctggtg
cgccgcagtgacgtctgtctgtccacattctacaaagactgcgcagagatgacagacgca
gactgcaggtgtcagacggccgacagggacagcaggtcggtggaagtgagggaaactctc
aacagacggtcggtcgatgaaaactacaacaacgtttcttctccgagccgcagactggcc
gggaaactgcagcagctcctcacacccacacggaaccgagcgtcagtgagacgggctgcc
agcgtggacgacagacggcctggagcgaccgggacatcccgccggactctggagcagaag
tcatcacggaaaatccacatgcctgagagtctgctgaaggccaaagaacgtctttataac
gccacatctgagagctcgctgtcagtcagcagtgatgtcgacatgactgacattcagaca
ctgaccgttcctctcaggaagtcatgggattctgcacaggaagcggcgggcattgaggtg
ttgatgtcgagctgttcgctgtgtcgtggctgtaactctctggtttatgatgaagagatt
atggccggctggtcgtctgatgactccaatctcaacagcacgtgtcctttctgctcggca
tcgtttgttccgctgctgaacgcagaaatctgtgacgtgggtcctgtctgcagtgtggag
cgcattctgaatgtggagggtgaggtagagaacggcgtgagaccacctgctggacgggag
gacgcacagcagcacgtgtgtaacggcatcagagaggcggagtccagctcagacaccagc
agccaatcagagagcagcagccccacccgggtgtcatcggggggcggagctccgcaggtt
accgtggcgtatctgagtcctcttgtgttgcgtaaggagacagagagtctgctggagaat
gaaggggaggctgttctctctcaggtccagctgctggacagtcatcccatactcttctgg
aatctagtgtggtacttcactcgcctcggcctccccagtaacctaccacaactcctgaga
gagtcaccgctgaccgcacactgcacacaggtttcagagggcagtggagtgcgtgtgagg
ttgttgtgggacatgttgacccctgaccccgagcagtggcctcctctctatatcatctgg
agaatgcacagtggcgctgccctgcgcacttccagctggcggcatcataaccatcccttc
actctgaggttcctggaggaagtgctgcgctgggttggcatgaacgaggttcacaaggct
atcacgctcttcctggataccgttgctaagcaaccaggcactcccaggatacagaggagt
ttgtacagagagatgttgttcctcacagtggctgcgatgggcaaagatcacgtggctgcg
tttgataagcgttataaagctgcttacttgcgcttgagcggttctttgggtcgagatgag
ctcaggaggaagagagttcagccgccgagtaccaaagctgtggactgcagacgctgtttt
ctgctccccctggagtgttga
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