Triplophysa dalaica: 130432552
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Entry
130432552 CDS
T09616
Symbol
ddx61
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130432552 (ddx61)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130432552 (ddx61)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130432552 (ddx61)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130432552 (ddx61)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130432552 (ddx61)
mRNA degradation factors
5'-3' decay
Decapping complex
130432552 (ddx61)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130432552 (ddx61)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
130432552
NCBI-ProteinID:
XP_056617956
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All DBs
Position
12:6867652..6875367
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AA seq
483 aa
AA seq
DB search
MATARTEIPASVMAMTKQNGQSKPMTLQSGSLTSSTQSGKAPVVPPKGSSIPQSSGGIRF
GDDWKKCLLLPPKDTRVRTTDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIP
IALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDYVQAIVLVPTRELALQVSQISINMS
KHLGGVKVMATTGGTNLRDDIMRLDEIVHVIIATPGRILDLLRKGVAKVDKAQMIVMDEA
DKLLSQDFVVLVEDIISFLPKNRQVLLYSATFPISVQKFMTKHLQKPYEINLMDELTLKG
ITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKM
MQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRY
GHLGLAINLITAEDRFNLKGIEDQLITDIKPIPSSIDKSLYVAEFHSIHPDEEEAAQKAA
GLN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcaagaacagagatccctgcttcagtcatggcaatgaccaaacaaaatgga
cagtctaagcccatgaccctccagtcagggtcactcacttcctcaacacaatcaggaaaa
gcaccggttgtgcctccgaaaggaagcagtataccccaaagcagtggtggtatcaggttt
ggagatgactggaagaagtgcctcctgcttccaccgaaagacacacgagtgagaaccaca
gatgtgactgcaaccaaggggaatgagtttgaggattactgccttaagcgtgaactgcta
atgggtatctttgagatgggctgggagaaaccttcccctatccaggaggagagcattccc
attgccttgtcaggaagggacattctcgctcgagctaaaaatggcacagggaaaagcgga
gcctacctcatcccactcttggaaaggattgatctgaagaaagactacgttcaagccata
gtgttggtgccaactcgtgagctggctctgcaggtgagccagataagtatcaacatgagc
aagcatcttggtggcgtcaaggttatggctacgacaggtggtaccaacctaagggatgac
atcatgcgtcttgatgagatcgttcatgttataattgctaccccgggcagaatccttgat
ttgttgaggaaaggtgtggccaaagttgacaaagctcagatgattgtgatggatgaggct
gacaagttgctttctcaagactttgtggtgcttgttgaggacatcatcagctttctgccc
aaaaaccgtcaagttcttctgtattctgccactttcccgatcagtgtgcagaagttcatg
accaaacatctacaaaagccatatgaaatcaatctaatggatgagctgaccctgaaaggc
atcactcagtactatgcctatgtaaccgaaaggcagaaagtgcactgtctcaacacgctt
ttctccaggctccaaatcaaccaatcaatcatcttctgtaactccacccaaagagtggag
ctccttgccaagaaaatcactcagcttggctattcctgcttttacatccatgccaagatg
atgcaggaatacagaaaccgggtgttccatgacttcaggaatggtctgtgtaggaacctg
gtctgcacagatcttttcacgagaggaattgacatccaggctgtcaatgtagtcatcaac
tttgactttcccaaaaatgcagagacgtacttgcatcgcattggcagatcaggcaggtat
ggtcacctgggtttggctattaacctgatcaccgcagaagatcgtttcaacctgaagggc
attgaggaccagctgatcactgacatcaagcccattcccagcagcattgacaagagtctg
tatgttgcagaatttcactccatacatccagatgaggaggaagccgctcaaaaagcagca
gggcttaattaa
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