Triplophysa dalaica: 130432632
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Entry
130432632 CDS
T09616
Symbol
arid1aa
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130432632 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130432632 (arid1aa)
03021 Transcription machinery [BR:
tdw03021
]
130432632 (arid1aa)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130432632 (arid1aa)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Helix-turn-helix
ARID
130432632 (arid1aa)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130432632 (arid1aa)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130432632 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
130432632
NCBI-ProteinID:
XP_056618070
LinkDB
All DBs
Position
12:complement(3425152..3447283)
Genome browser
AA seq
2267 aa
AA seq
DB search
MAAQVASATSLNTSPPSELKKPDRDPKEESVPGEKQQENKEPGLESGSPGRGELQDRADV
GNAGGGGESEMKNGNGNPSRVNNNQNDTAGPDGNNHPGMVHHHAPGFTPPSHGYSQHYGR
APFHQHGGQQSPGMAAAAGPGALSSNMMDPYQPNSHEHGFSNHQYNNYSPFGNRSPYPGQ
GYGVNSPRSAPQAQAVGGQSAKQQQPAAGGSLAASYNNQRYNMGNPQPTSTPTLNQLLTS
PSGARSYPNYPPSDYNSQDGAKGPADMGSSGQYGGGHPGWQQRTHHPPPMSPGSTGQPMG
RNQTPGSMDQMGKMRGQPYGSGGPYSQQPHQGPPTGPQQGPAYPGPGYGPPGAQRYPMGM
QGRIQYGQQMPSYGQQGPGGYVQQGQQPYYGQHGQGPHSGQQQSPYPQPSPGQPGGQGPY
SQQPHGPQPSGPHVQAGAPYQHPHMAQQPQAQIPGPSPGPSQSPYSQASAAPQSAQSPYP
QQQVPQSQPPQQGNSQAPPASQTQPSYPPGQGSQPPSSQQPPQTPTPASQQPAGHGQMSQ
TQPTSYSQNPPPQQQQQQQSPYPRFPPAQEISQESFSSQSSAPPSNQPLASKGSTEDMQG
RPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPPVGSPAS
ASASRSGPLSPATIPGNQMPPRPSSGQSDGVMHASVNMPGMGQDRGYVQRNPQMGPYGSP
QSGSALSPRQSSGSHAGMVPYQQNNSMANYAPQGGQYGPQGFPRQPGYTGMPNANYPGTG
MGGPMNPMSGQGGGPLYPGMPSGXIPHTQMGARPYGPNMGPNMSPNMGPNMVNMSPQVVS
GMGPPPGLNRKPQDAAAMQHGPSNSIHNRLPGYPNMSPGPVMMGSGPPYGPSMNNMPGMM
NTQGPSYPMGGNMANNTSGMSPGPDFGMDGKVNQPQKMNNKVEGTPKTETKSKKSSSSTT
TNEKITRLYELGPEPERKMWVDRYLAFIEEKALGMSNLPAVGRKPLDLFRLYMSVKEIGG
LTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPEIPGDTKK
NQAKIQPPSPAGSGSLQGPQTPQSTSSSMAESGDLKPPTPASTPHSQMPPMQSGRSSVNL
QDPFADNDPAFSRRNTLTPNSGYQSGMSTPEMPGRMGPYEPSKDHFGGMRKVGEQFIPGG
QGPNSGLGDQYNRGPPGPMGNVPMGQRHQYPYGPGYERRPESGMGPEGSMGPGVPQPNMM
PSNAESGMYSPNRYPPQQQRHESYSNQYPGQGAPPGGSYPNQQPGIYPQQQTNYKRPGEG
GYPPAKRHHDGEMFGGPYNAQQPPSQAPPGGPSSGQQDMFNQFNSSYPGAERRPPGPQNQ
FPFPFGRDRMPGAAGPNSQGPMPPQMIGSPMQSGPDGPQGGMWQGRGEMGYGGYPNRQGP
PAGPGQGPGFHSMNRPEEMLTSEPRMNHDGQWPGPRQPPYGGAGPPMSRPLQSNYQSPQA
MQNHIPQVSSPTPMPRPMESGSSPSKSPYMPGSIKMHKAGPPVPASHIVPSSVHPPLMRR
DMPFPAGSTEASQPVLKPRRRLTMKEIGTPEAWRVMMSLKSGLLAESTWALDTINILLYD
DNSISNFNLMQLPGFLELIVEYFRRCLIEIFGILKEYEVGDPGQRALLDPSVLKKDENTV
DDETLVEGMEEDGETEEEDEGEETQRSKHQEQHTAPEPLKIKQEEMHRTCEDSGKKIDCQ
AEDGESSKEAKTLDPPSLELAVTQEKPKQASKFDKLPLKIVRKKDPFVVDCSNKLGRLQE
FDSGLLHWSIGGGDTTEHIQTHFESKVDLLHLWKRLPFQASDKKRGALKDAEVPSPSSSS
EEHRKEVDRQPSQQSSTEVTDGISETRAERPADCFETSTGEKANGESDHEKQGSETTAPE
NIRPSTSSQGQRPISILEDEPHSKDEAPLVTLSDWQDSLSRRCICVSNIIRSLSFIPGND
LEMSKHPGLLLILGRLLLLHHRHPERKQAPLTYEKEEEVEESHGNKKDEWWWDCLELLRE
NCLVTLANISGQLDFSVYTESICLPLLDGLLHWAVCPSAEAQDPFPSLGLNGVLSPQRLV
LETLCKLSIQDNNVDLILATPPFSRLEKLFGNLVRLVGERKVPVCREMAVVLLANLAQGD
SMAARAIAVQKGSVGNLLGFLEDSLAATQFQQSQGSLLHMQGSHFEPTSVDMMRRAARAL
LAFAKVEENHSEFTLYESRLLDLSVSPLMNSLVSHVICDVLFLIGQS
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgctacctctctcaacaccagtccgccttccgaactaaaa
aaaccggaccgagacccaaaggaggagtcggtaccgggggaaaagcagcaggaaaataag
gagccgggattagagagcggatcaccgggtcgcggggaactgcaggaccgggccgatgtt
ggaaatgctgggggaggaggggagtctgagatgaagaacgggaacgggaatccgtcgagg
gtgaacaataatcaaaatgataccgccggacctgacgggaataaccaccccggtatggta
catcaccacgcgcccggttttacgccgccttcccatggctacagtcagcactacggccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcgggacca
ggcgcgctgtcgagcaatatgatggacccgtatcagcccaactctcacgaacacggcttt
tctaaccaccagtacaacaactacagtccgttcgggaaccgaagcccgtacccgggccag
ggatacggcgtgaactccccgcgcagcgctcctcaagctcaggcggtaggggggcagtca
gccaagcaacagcagccagcagcgggaggatctttggctgcatcttacaataatcagagg
tataacatgggaaacccgcagccgacatcgaccccgaccctcaaccagctcctgacctcc
ccgagcggtgccagaagctacccgaattacccacctagcgactacaacagccaggatggt
gctaagggaccagcagatatgggcagcagtgggcagtatggtgggggccatccgggttgg
caacaaaggacccatcacccgccacccatgagtcctggaagtaccggacagcccatgggt
agaaaccagactccgggctcaatggatcagatggggaaaatgcgaggacagccatatggg
tcgggcggtccttactcgcagcagccccatcaggggcctcctactgggccccagcaggga
cctgcatacccaggcccgggctatgggcctcctggagctcagagataccctatgggcatg
caaggacgtatacagtatggccaacagatgccatcatacggacagcagggaccagggggg
tacgtgcagcaggggcaacagccctattatggccagcatggtcaggggcctcactctggc
cagcagcagtcgccatacccccagccttcccctgggcaaccaggaggtcaaggaccttac
tcgcagcagcctcacggcccccaaccatctggtccacacgtacaggccggtgctccttac
caacatccccacatggcccagcagccccaagcgcagatacccggcccctcaccaggccct
tcccaatccccatactcgcaggcctctgcagcaccccagtctgcgcagtccccttatccc
caacaacaggtgcctcagtcccagccccctcagcaggggaactcccaggcccctcctgca
tcccagacccagcctagctacccgcccggccaaggctcccagccgccgtcatcacagcag
ccgccacagacgcccacacctgcatcccagcagcctgcgggacacggacagatgtcgcag
acgcaacccacgtcatactctcagaatcccccaccacaacagcagcagcagcaacaatcg
ccatacccgcggtttcctcctgctcaggagatttcccaggagtcctttagctcccagtcc
agtgcgcctccctccaatcagcctctggcttctaaaggaagtacagaggacatgcagggc
agaccctcaagtctaccagacctttccggttctatcgatgacctgcctacgggtacagaa
ggtgctctgagccctggagtcagcacatctggagtatccagcagtcaaggagaacagagt
aatccagcacagtcgccattctccccccacacatctccgccggtgggctcgcccgccagt
gcctcagcatctcgctctggccctctgtcccctgccaccataccaggaaaccagatgcct
ccccggccatcaagtggacagtctgatggggtcatgcacgcttcagtgaacatgcctggc
atgggccaagacagaggatatgtgcagagaaaccctcagatgggaccctatgggtctcca
caatctggatctgctttgtctcctcgccagtcatcaggaagccatgctgggatggttcct
tatcaacagaacaactctatggccaattatgcgcctcaaggtggtcaatatggcccacaa
ggtttccctaggcagcctggttacactggcatgcctaatgccaattatccaggtaccggt
atgggtggacctatgaaccctatgtccggacaaggaggaggaccactgtatcctggcatg
ccttctgganggattcctcatacccagatgggtgcacgtccttacggccctaacatggga
cccaacatgagtcccaatatgggcccgaatatggtgaacatgtcgcctcaagtagtctct
gggatgggcccacctccaggcctcaacagaaagccgcaggatgctgcagcaatgcagcac
ggaccctcaaactctatacacaacagactaccaggttaccccaatatgtctcctggtcct
gttatgatgggttcaggtcctccctatggcccgtcaatgaacaacatgccaggaatgatg
aacacccagggtccttcctacccaatgggtggtaacatggctaacaacactagtggcatg
tcccctggtcctgactttggtatggatggaaaagtaaaccagccacaaaaaatgaataat
aaagttgaggggacacccaagacggaaacaaaatccaagaaatcaagctcctccacaaca
accaatgaaaagatcactcggttgtatgagctaggcccagagcccgaaagaaagatgtgg
gttgaccgttacctggctttcattgaagaaaaagccttgggcatgagtaacctaccagct
gtgggacgtaaaccccttgatctcttccgactctatatgtccgttaaggagattggaggt
ctcacacaggttaataagaataaaaaatggcgggagctggccacaaatctgaatgtgggg
acctcaagcagcgcagccagctcgttgaaaaagcagtacatccagtgtctatatgctttt
gaatgtaagatcgagcgtggagaagacccaccacctgaaattcctggagacaccaaaaag
aatcaggccaaaattcagccaccctccccagctggatctggctctctccaggggccccag
acaccacagtctaccagcagctccatggccgaaagcggagacttgaagcctcccactcct
gcctctactccacacagccagatgcccccaatgcaaagtggcaggagcagtgtgaaccta
caagatccatttgctgataatgacccagccttctctcggcggaacactttgacccccaac
tctggctaccagtcaggcatgagcactccagagatgcctggtcgaatgggaccctacgaa
cccagcaaagaccactttggtggcatgcgcaaagttggagagcagtttatacctggtgga
cagggtcctaacagtggtctcggtgatcaatataacagaggaccaccaggccctatgggg
aacgtgcccatgggtcagaggcaccaatatccatatggtcctggttatgaaagaaggcca
gagtcagggatgggcccagaaggcagcatggggcctggagtgccacagccaaacatgatg
ccttccaatgctgaatctgggatgtactcaccaaaccgttaccctccacaacaacagcgg
catgaatcgtatagtaatcagtatcctgggcagggtgcgcctcctggtggctcctatccg
aatcagcagcctggaatttatccgcaacaacaaacgaactacaaaaggccaggtgaagga
ggctacccaccagctaaacggcatcatgatggcgagatgttcggtgggccgtacaatgcg
cagcagccaccatcacaggctccccctggtggtccctcgagtggtcagcaggatatgttt
aaccagtttaacagttcttaccctggcgcagagcgacgtccacctggtcctcagaatcag
ttcccattccctttcggaagggatcggatgccaggggcagcgggccctaactctcagggt
cccatgccgcctcaaatgattggcagtccaatgcagtctggtcccgacggtcctcaaggc
ggtatgtggcagggccgaggtgaaatgggctacggtggttaccccaaccgtcaaggacct
cctgcaggtcctggccaaggccctggtttccattcaatgaaccgccccgaagagatgttg
acatctgaaccacgtatgaatcacgacggccagtggcctgggcctagacagcccccgtat
ggtggtgcaggcccaccaatgagcagacccttgcagtccaactatcagtcaccccaagcc
atgcagaaccacattcctcaggtgtcaagtcccacgcccatgccccgacctatggaaagc
ggcagttcacccagcaaatcaccctacatgcctggcagtatcaaaatgcataaggctgga
cctccagtccctgcatctcatattgtaccttcctcagtacaccctcccctgatgagaaga
gacatgcccttccctgcaggctccacagaggcttcacagcctgttctcaaacctcgtaga
cgtcttaccatgaaagagattggaacaccggaagcatggagagtcatgatgtccctaaaa
tcaggacttttggctgagagcacgtgggctttagataccatcaacatccttttgtatgat
gataacagtatttcgaatttcaatcttatgcagctcccgggtttcctggaactaattgtt
gagtatttccggcggtgcctcatcgagatctttggcatcctgaaggaatatgaggtcggt
gatccaggacaaagagcactgttggatcctagtgtgctcaaaaaggatgaaaatactgtg
gatgatgaaacactggtggagggcatggaggaagacggagaaacggaggaggaggatgaa
ggagaggaaacgcaaaggtcaaaacatcaagaacaacacacagcaccagaacctctcaag
ataaaacaggaggaaatgcacaggacttgtgaagactctgggaagaaaatagactgccaa
gcagaggacggagagtcatctaaagaagccaagactttagatccaccatccctcgagctt
gctgtgactcaggagaagcccaaacaggctagcaagttcgataaacttcctttgaagatt
gtaaggaagaaggatcctttcgtggtggactgctcgaataaacttggccggttacaggaa
tttgacagcggcctgctgcactggagtattggtggaggcgatacaaccgaacacatccag
acccacttcgaaagcaaagtggatctgttacacctgtggaagcggcttcccttccaggcc
tcagacaagaaacgaggagcgctgaaggacgctgaggtgccttcaccatcctcatcgagt
gaagagcaccggaaggaagtggaccggcagccttcacagcagtcatccactgaagtaacc
gatggaatttccgaaacgagagctgaaaggcctgccgactgctttgaaacttccactggg
gagaaagcaaacggagagtcagatcatgagaaacaaggatcagagacgaccgctccagag
aacatcaggccaagtacatcatcacagggtcagcgtcccatctccattctagaggatgag
ccacacagcaaggatgaagctcctctcgtcactctctccgactggcaagattccctctcc
cgtcgctgcatctgcgtctccaacatcatccgcagcctctcattcattccgggcaacgac
ttggagatgtccaagcacccagggttgttgcttattctaggtcgcctcttgcttctccac
catcggcatccagaacgcaagcaggcgcctttaacctatgagaaagaagaggaagtggag
gagagtcacggtaacaagaaagacgagtggtggtgggactgtctggaactgctgcgggaa
aattgtttggtcacactcgccaacatctcaggccagcttgatttctctgtctacactgag
agcatctgcttaccgctgctggatggcttgctccattgggctgtgtgtccttctgccgaa
gctcaagaccctttccccagcctcggtcttaacggtgtattgtcccctcagagactagtc
ctggagaccctctgtaaactcagcattcaggacaacaatgtggacctcattctggcaacg
ccaccttttagtagattagaaaagctgtttgggaacctcgtacgactagtcggcgagcga
aaggtgcctgtctgccgggagatggcggtcgtgttactagccaatcttgcacagggtgat
agcatggcagcacgtgccattgcggtacagaaaggaagcgtagggaatctgttgggcttc
ttggaggacagcttagcagcgacgcagttccagcagagccaagggtccctactacacatg
cagggatcccactttgagccgacaagtgtggacatgatgcggcgagcagctcgagctctg
cttgctttcgctaaggtagaggagaaccactctgaatttacgctctatgaatcacggctt
ctggacctttccgtctcccccctcatgaactctttggtgtcccacgtcatctgtgatgta
ctgtttttgataggccagtcatga
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integrated database retrieval system
