Triplophysa dalaica: 130433095
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Entry
130433095 CDS
T09616
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tdw
Triplophysa dalaica
Pathway
tdw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130433095 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130433095 (smarcd3b)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130433095 (smarcd3b)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130433095 (smarcd3b)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130433095 (smarcd3b)
PBAF complex
130433095 (smarcd3b)
GBAF(ncBAF) complex
130433095 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130433095
NCBI-ProteinID:
XP_056618808
LinkDB
All DBs
Position
1:14724884..14764283
Genome browser
AA seq
507 aa
AA seq
DB search
MASEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
NNQAMEPSRKRPAPSQQQIHQQQAVQNRNRKKPVGFSGPNEMPVRQMDMRETQSDPTLGL
NAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRK
LRIYISNTYNPAKPDAEDSEGSIASWELRVEGKLLEDPGKLKRKFSSFFKSLVIELDKDL
YGPDNHLVEWHRTQNTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIH
TQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDSPRLKFSEIPQRLTNLLLPP
DPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIASLDNKIHETI
ESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFYHEPWSQ
EAVSRYFYCKIQQKRQELEQVLAMRTT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggaggagaccgctggaggagctcgtaaagccaccaagagcaaactatttgag
ttcctcgttcatggagtgcggcctggcatgccatcaggggcacggatgcctcaccagggg
gcaccaatggggcctccaggaccaccatatggaggaagcccggcagtaaggcctggactc
aacaatcaggccatggaacccagtcgtaaacgacccgctccttcacagcagcagattcac
caacagcaagccgtacagaatcgaaacaggaagaagcctgtgggattttctggaccaaat
gagatgccagtgaggcagatggacatgagagagacccaatcagatcccacacttggatta
aatgccaagaggaggaagatggctgataagatccttccacaaaggattcgtgagctcgtc
ccagagtcccaagcttatatggacctgttggcattcgagcgtaaattagaccagaccatc
atgcgcaaacgggtggacatccaagaagcacttaagagacccatgaagcaaaagcgaaaa
ctgcgtatctacatctccaacacctacaaccctgcaaagcctgatgctgaggactctgaa
ggcagcattgcatcctgggagctacgagtggagggaaaattgctggaagatccaggaaag
ttgaaaaggaagttttcctcattcttcaagagtctggtgatcgagctggacaaagatctt
tacggacctgataatcatttggttgagtggcatcgaacccagaacacccaggagacagac
ggttttcaggtgaagagacctggtgatgttagtgtgcgctgcactctgctgttaatgctg
gattaccagccgcctcagtttaaactggatccgagactggctcgtcttctgggtattcac
acacagactcgctccagtattatacaagcgctctggcagtatgtcaaaaccaacaaattg
caggactcccatgacaaggagtacatcaactgtgataagtacttccagcagatctttgac
agtccgcgtctgaagttctctgaaattcctcagcgtctcactaatctgctgctgcccccc
gaccctattgtcatcaaccacatcataagcgttgaccctaatgatcaaaagaaaactgcg
tgctatgacattgatgtagaggtggaagatccccttaaagctcagatgagcagctttctg
ctctccacagccaatcagcaagagattgcctcactggataacaagatccatgagactatt
gagtctataaatcagctgaagatccagagagatttcatgctcagcttctccagagatccc
aaaggctacatccaggactggctcaaatcccagagcagagatcttaaacttatgacagat
gttgttgggaacccagaggaggagagaagagcagagttttatcatgagccatggtctcag
gaggctgtcagtcgatacttctattgcaagattcagcagaagagacaggagctggagcag
gttttggctatgaggaccacctaa
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