Triplophysa dalaica: 130433126
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Entry
130433126 CDS
T09616
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130433126 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tdw04990
]
130433126 (snx27b)
Membrane trafficking [BR:
tdw04131
]
Protein recycling
Others
Others
130433126 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
tdw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
130433126 (snx27b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
SNX17_FERM_C
USP7_C2
PDZ_2
SNX17-31_F2_FERM
Sina_TRAF
DarA_N
Motif
Other DBs
NCBI-GeneID:
130433126
NCBI-ProteinID:
XP_056618818
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Position
12:complement(7759788..7770001)
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AA seq
569 aa
AA seq
DB search
MADVIEGDGPRSAPSSALHPSARNGSDMSSVTCAGGHVGTTVASGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGSNVEGATHK
QVVDLIRAGEKELVLAVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHAEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREYANFAFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKSTVTVRVRKNC
TTDQVYQAVVTKIGMDNITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFSTEEEILLNDNELAINYCFHQALDDVKKGFIKVGETSYQLQKLNEQRKMTTYL
NILRPCEGYNEITFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWKKEVEEEATDKD
NKNCSKDEYLPTVETQKGWRHMNEEIISS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttatcgaaggagacggtcctcgctccgctccctcttctgcgcttcacccg
tcggctcggaacggctccgacatgagttcggtgacgtgcgccggcggtcacgtcgggacc
acggtcgcctccgggcctcggcttgtccgcatcgtcaagtcggattcgggctacggtttc
aacgtccgcgggcaagtgagcgaaggagggcagttaaggagcattaacggcgaactttac
gctccgttgcagcacgtaagcgccgttttaccgggcggcgcggcagacagagccggaatc
tcaaagggcgaccgtattcttgaagtgaatgggtcgaatgtggaaggagccactcataag
caggtggtagacctcatccgagcaggagaaaaagagttggtcttggcagtcctgtcagtc
ccccagccagagacagacagtcttgatccaggggatgacggctcatctcagtcttgctat
gactacagcgacaagcaggcagtgcccatctctgtgcctacctacaaacatgcagagcaa
aatggggagaagtttgtagtgtacaacgtgtacatggcaggcagacagttgtgctctaag
cgctatcgggagtttgccatcttgcatcagaatctgaagagggaatatgcaaactttgca
tttcccaagctgccagggaaatggcctttctcgctgtctgagcaacagctagatgctcgc
agacgaggacttgaggagtacttagaaaaagtatgttctgttcgggtaattggggagagc
gacatcatgcaggaatttttgtcagagtcagatgagaactataatggcgtttctgatgtg
gaactgaggatagccatgcccgacaaatctacagttacagtccgcgtgcgaaagaattgc
acaacagaccaggtctatcaggctgtagtaacaaagatcgggatggataacattactgct
agttactttgctctatttgaggtcattaaccactcctttgcacgcaagctggcccctaat
gagtttccacataagctttatgtgcagaactacacatctgccatcccgggcacctgcctc
acacttcgcaagtggctctttagcacagaggaggagattctgcttaacgacaacgagttg
gccatcaactattgctttcatcaggctctggatgatgtaaaaaagggatttatcaaagtg
ggtgaaacatcctaccagctccaaaagcttaatgaacagaggaaaatgaccacgtattta
aatattctaaggccgtgtgagggctacaatgaaatcactttccctcactgctcttgtgac
tcacgtagaaaaggtcatgtcatcacagcgataagcatccaccactttaaactccatgcg
tgcactgaagatggcactctagagaatcaggttattgcattcgaatggtcagagatgcag
agatgggacacggacgaagagggaatggcattctgtttcgagtacgcacgaggggagaag
aaacctcgctgggtcaagatattcactccttacttcaactacatgcacgaatgcttcgag
agagtcttctgtgagcttaaatggaaaaaagaggtcgaagaggaggccacagacaaggac
aacaagaactgcagtaaagatgaatatcttccaactgttgagacacagaagggatggagg
cacatgaacgaagagatcatctcctcttga
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