Triplophysa dalaica: 130433140
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Entry
130433140 CDS
T09616
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130433140 (wdtc1)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130433140 (wdtc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
TPR_19
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_SPT8
TPR_2
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
NBCH_WD40
TPR_17
ANAPC3
Beta-prop_WDR19_1st
TPR_1
TPR_16
TPR_9
TPR_11
Barstar
Motif
Other DBs
NCBI-GeneID:
130433140
NCBI-ProteinID:
XP_056618836
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Position
12:complement(23100626..23106658)
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AA seq
700 aa
AA seq
DB search
MSARNVASDLMQRKIREHRSLDFQRHHHVTDPLIKRLGLEAELQGHTGCVNCLEWNEKGD
LLASGSDDQHAIIWDPFRHKKLVTMHTGHAANIFSVKFLPHSGDRILITGAADTKVHVHD
LEAKETIHMFSEHTNRVKRIATAPMWPNVFWSAAEDGIIRQYDLRENSKRSEVLIDLTEF
CGQLVEAKCLAINPRDNNYLAVGANGPFVRLYDIRMIHNHRKSSSQSTSAGIHTFCDKRK
SIPDDAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFK
QRPYTFLLPKKCHPSSDVQNGKTTNGMSNGIHLPASRLRLAQVSSNCTDLPPHLESIKQQ
ANDAFARQQWTQAIQLYSLAIHKASHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKALTL
NPGHLKAHFRLARCLFELRYVAEALECLDDFKGKFPEQAHSSACDALDKDIKAALFSKTE
SAEDRKRDGSVRFHNFSRKESIPEDEIILRERSFDYKHRYCGHCNTTTDIKEANFFGSKG
QYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLASSGIDPVVRLWNPR
PETESENCRVVEDMEGAAQANQRRMNADPLEVMLLNMGYRITGLSSRGTDASDEDDSTDV
LAHDGEGMNARSADVRRSFSQSFTNKTSRPLFPTVRCAPR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacgcaacgtcgccagcgatcttatgcagaggaagatcagggagcacagatcg
ctggattttcagagacatcatcatgtgacggatcccctgataaagcgtctgggcctggag
gcggagctacagggtcacacggggtgtgtcaactgtctggagtggaatgagaagggagat
ttgctggcgtctggttcagatgatcagcacgccatcatctgggatcccttccgacacaaa
aagcttgtcactatgcacacgggacacgcggcaaacatcttctccgtcaagtttctccct
cactcgggcgaccggatcttgatcacgggggctgcggacactaaggtgcacgtccacgac
ctggaggcgaaggagaccatccacatgttctctgagcacaccaaccgcgtcaaacgcatc
gctacggctcccatgtggcccaacgtcttctggagcgcggcagaggacgggatcattcgg
cagtatgacctgcgagagaacagcaaacgctccgaggttctgatcgatttgacagagttt
tgcgggcagctggtggaagccaaatgtctggccatcaaccctcgtgacaacaactatctc
gctgtgggtgcaaacgggccgttcgtccggctctatgacatcagaatgatccacaatcac
aggaagtcttcgagtcagagtacctcggcgggcattcacacgttctgtgacaagcggaag
tccataccagacgacgctgggcagtactacgtggcgggtcacctgcccgtcaagcttcca
gactataacaacagattacgagttctggtggccacttacgtgacgttcagccctgacggc
actgagctcctggtcaacatgggtggagaacaggtgtatttattcgacctgacgtttaaa
cagaggccgtacacgtttctcctgcccaaaaagtgtcatccttcatcagatgtacagaac
gggaaaaccacaaacggcatgtccaatggaattcaccttcctgccagccgcctgcgattg
gctcaagtgtccagtaactgcactgatctgccgcctcacctggagagcatcaagcagcag
gcgaatgatgcgttcgcccgccagcagtggactcaagccattcagctgtacagcctggcc
atccacaaagccagtcacaatgccatgctgtacggaaaccgcgccgcggcatacatgaaa
cgcaagtgggacggagatcattatgatgccctgcgagactgtctgaaggctcttacactg
aaccccggacatctgaaagctcacttccgcttagcccgatgcctgtttgagctcagatac
gtggccgaggctctggagtgtctagacgacttcaaggggaagtttccagaacaagcacac
agcagcgcgtgcgacgccctggacaaggacatcaaagctgctctcttctccaagacggag
tccgccgaggacagaaagagagacggctccgtccgcttccacaacttcagtcggaaagag
tcgattcctgaggacgagatcattctgagagagcgaagctttgactacaaacaccgctac
tgcggccactgcaacaccaccactgatattaaagaagcaaacttctttggaagtaaaggt
cagtatatcgtgagcggctctgacgatggctcgtttttcatctgggagaaagaaacaacg
aacctggtacggatcttacagggagacgagtccatcgtgaactgcctgcagccgcacccc
agttactgttttctggccagcagcggaatcgaccccgtggtgcgactgtggaaccccaga
ccagagacggagagcgagaactgtcgtgtggtggaggacatggagggggcggcacaggcc
aaccagagacgcatgaacgctgatccgctagaggtgatgctgttgaacatgggttaccgc
atcacgggtctgagcagcagaggcacggacgcgtcagacgaggacgacagcactgacgtt
cttgcacatgacggtgagggaatgaacgcacggagtgcggatgttcggagaagcttctct
cagtccttcacaaataagacctcccgtccgctctttcccacggtgaggtgcgcacctcgg
tga
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