KEGG   Triplophysa dalaica: 130433181
Entry
130433181         CDS       T09616                                 
Symbol
mdc1
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
tdw  Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tdw03400]
    130433181 (mdc1)
DNA repair and recombination proteins [BR:tdw03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    130433181 (mdc1)
SSDB
Motif
Pfam: BRCT_2 BRCT RTT107_BRCT_5 PTCB-BRCT BRCT_3 FHA
Other DBs
NCBI-GeneID: 130433181
NCBI-ProteinID: XP_056618882
LinkDB
Position
12:8447425..8456627
AA seq 1866 aa
MDATQQIEDPFSEEEDNGEKEEYKEGSEREQVATLKVFKNDHVPEREFPLYVGENVLGRD
PVACSVLLPARSVSGRHAVISISVFHSSNNRPSDIEAVEALLWDTGSLNGTRKGRLKLTP
QVRYALAEGESVVLADIPCQYISLHVSKRDTQSVSKEIGAFKHEKKESSSVPSSHSEPKI
RKGVLNEKVRGALPPVPLWSPEDEGSKSAASLYLPNPVYKLPEITLVPDSDSGSDGESAT
DDRRDVVSDSASSSHLVSPSDSTFLTPAKKVIPESEDESSITPSSATIDLFKVKGSFNEG
CSDSSKTGPLALNLDSDTDIEEEETDRDGSGADAQTKVASKVEPVSLGDLHMDSDTDVEE
DQTENSKAEPEAQNVHLKKAVSSTGLDLDSDTDVEEEETEKSKTERQALIKEASRVESVT
SADLHIDSDTDVEEEEPEKSKTEQQTLNKEASRIGIVTSADLHIDSDTDVEEEETEKSKS
ETDTQIKQAPEVKPVTSSNLHIDSDTDVKNDATHTAEPPKVVAAPESPLSAPPHAEIHLD
SDTDVEDDNPSDVPTATEVSHPVVKDSDVRLASNPGAGCYMDSDTDVEDDEDPFKSLPGK
VAENQKVSTGSKVEQPEKSIHKQTHPFQAYNHHEEPTQAFDNLDDWDLQATQAYGGTGAN
AVLRPKEVDLEATQAYGAETDREDEEEPLSCSEVHSNLSTAETQLIPTAKSNDEDDDEEM
PDDFNLSTADTLILASTPRREEQTQHFALFTAPTQLILEGEEKEVDQSEPVQLMQADTIY
ETQDGVEENIIWGRKRNNVGGRMQKYKTYSTSQLIIAETQPMCKDEDASNEGQNSASTSK
HTDEDEHKHLREEPSSSCVTIAETQPMFEEDETLNMDLKIGSTLGDSKQKNMNLHRLIKA
PLPILSLLKRSQCVRMKGHLMKVLTVLSAAETHMMNQKISEKNRLALMSPAETQPIFEEE
LKLEVNSGKLDTRQAKEHESIQLADTIFSSINLDENKPVEHPKTPSPLTITVTETQPMCE
EQETPQEDQNNAGPDRSNQFQKTQPVHEEDEGQDKELSSKMPSRRSSRGRPKKQEEVSQP
SEGVVHHTIAETQLICEEGNKNDEDQNVGVKSRRSRRGRPSKKDDVPQPVESEEKTEEED
MNSVLRSKRSRRGRQTDEGEPAKSLEPNSDVNVVEEEHTNAGRSCQTRKVGGKRQRKEKT
DQENESGASSKGPDRARKGQEGKRNRRQALSEEEEESEEEKTRRIGTRRTGKKQKCKEMI
GEQELKEDMENNVQEEKEKVEKELQEQEARERLEREEQERLECERMENEEREERGRQNLE
REQKELEEKERLKREEEEKQKEEKETMDQIKSEKEERNRLEKELKEKLERQRLEKEEEER
IQREKMEKEQKEKEHLQRIEAEREQLEKERQENEMLEMAAQAQLNREQKETNQQEEQKNE
TPEEKNTKLNAFSVSPNDDVPVRRSRRHSNSSVNSEQSVSSQQEQSSQRGRGRGRGRGRG
RGRPTTTVQPVGGRQSGRTKTIPGPADDVDETEQVSITPSRSRSSSRSSDRSSHSMGTQN
QMTRGRGRGRKSLKLPEPEEEVFQPKTPGRGRGKGSRKGTNVEINTKQDEDVVEEAVVPQ
TNSRGRKRTATASTSSVETPPPTPKTPRRSTTSQMQRVLFTGLTDEDGERVVARLGGSLA
KGVNDMTHLVTDKARRTVKFLCAIARGVPIVTPDWLKKCGKAGHFLSADEYLLKDVEQEK
KFSFSLQAALQAALRQPLLKGYEIHVTSSVIPEPSQMKEIITCCGARFLPKMPSSRKEHT
VVVSCEQDRELCEKASRMSLPVVSTEFLLTGILQQKVDLQAYSLTSSLNAANQTAAPKAP
ARGRRK
NT seq 5601 nt   +upstreamnt  +downstreamnt
atggatgctactcaacagattgaagatcctttctctgaagaagaagataatggtgagaaa
gaggagtacaaggagggatcagaaagagaacaggtggcgaccctgaaggtgtttaaaaac
gaccatgttccagagagagaattcccactctacgttggcgaaaatgtcttgggtcgtgat
cctgttgcctgttctgttctgcttccagcccgatctgtgtctggtcgacatgctgtcatc
tccatctctgtgttccactctagcaacaatcgtcccagtgacatcgaagccgttgaagca
ctattatgggacactgggagtttaaatggaaccagaaaaggcagattaaagctgacgcct
caagtgagatacgctctggctgagggagagagtgtggtacttgctgacattccgtgccaa
tatatcagtctacacgtttcgaaaagagacactcagtcagtttcaaaggagattggagca
tttaagcatgagaaaaaggaaagttcatcagtgcccagcagtcattcagagccaaagata
aggaaaggagtgctgaacgagaaagtgagaggtgccttgcctcccgtgcctttatggagt
cctgaggatgaaggatctaagagtgcagccagcctgtatttaccaaacccagtttacaag
ctgcctgagatcaccctggtgcctgattctgactcgggttcagatggagagagcgctaca
gatgataggagagatgtagtttcagactctgcatcctcctcacatttggtaagcccttca
gattcaacattcctgaccccagccaaaaaagttattccagagagtgaggatgagagctcc
attactccatcttcagccacaatagacctatttaaagtgaaaggcagcttcaatgaaggc
tgttcagactcctctaagactggcccgctggctctaaacttagacagtgacactgatatt
gaggaagaggagacagacagagacgggagtggggcagatgctcagactaaagtagcttca
aaggtggagcccgtatctttaggtgatctacatatggacagtgatactgatgtagaggaa
gaccagactgagaatagcaaggctgaacctgaagctcagaacgtacatttaaagaaagca
gtatcttcaactggtcttgatttagatagtgatactgatgttgaggaagaggagactgag
aaaagcaagactgaacgacaggctcttatcaaagaagcttcaagggtggaatccgtaact
tcagctgatcttcacatagatagtgatacagacgttgaggaagaggagccagagaaaagc
aagactgaacaacagactcttaacaaagaagcttcaaggatcggaattgtaacttcagct
gatcttcacatagatagtgatacagacgttgaggaagaggagacagagaaaagcaagagt
gagacagatactcagattaaacaagctccagaggtgaaacctgtaacctcatcaaatctt
catattgacagtgatactgatgtcaagaatgatgccacccatacggctgaacctcccaaa
gttgtagcagctccagaaagccccctatcagctccccctcatgcggaaatacatttggac
agtgacactgatgtagaagatgacaatcccagtgatgttcccacggcgacagaggtttca
catccagtcgtaaaggatagtgacgtcagacttgcttcaaacccaggtgcagggtgctac
atggacagtgacacagatgtagaggatgatgaggatccttttaaatctttaccaggcaag
gttgcagagaatcaaaaggtttctacaggcagcaaagtagagcaaccagaaaaaagcatc
cataaacaaacccatcctttccaagcatataatcatcatgaggaacccacccaagctttt
gacaacttagatgactgggacctacaggcgacacaggcatacgggggtactggagccaat
gctgttctcaggccaaaggaagtggatcttgaggctacacaggcatacggagcagagaca
gacagagaggatgaagaggagcctctcagttgtagtgaagttcactcaaacctttccact
gctgaaacacagctcatcccaacagcaaagagtaatgatgaagatgatgatgaagagatg
ccagatgactttaacctctccacagcagacactctgatcctcgccagcaccccaagacga
gaagagcagacgcaacatttcgctctcttcactgccccgacacaactcattttggaggga
gaagagaaagaggtggaccagagtgagccggtccagttgatgcaggctgataccatctat
gaaacacaagacggtgtggaggagaatattatatggggtagaaagaggaacaatgttggg
ggaaggatgcaaaaatataaaacctactccacctctcaactcatcattgctgaaacacaa
ccgatgtgtaaggatgaagatgcttcaaatgaaggtcaaaacagtgcgagcactagcaag
catacagatgaagatgaacacaaacatctaagagaagaaccctctagttcctgtgtcaca
attgctgaaacacaaccaatgtttgaggaagatgaaacacttaatatggatctgaagatc
gggtcaactctaggagacagcaagcagaaaaacatgaatctacacaggttaataaaagct
ccccttcccatcttgtcattgctgaaacgcagccaatgtgtgcggatgaagggacatctg
atgaaggtcttaacagtgctgtcagcagcagaaacacacatgatgaaccaaaaaatatca
gagaagaaccgtctagctctcatgtcacctgctgaaacacaacctatatttgaggaagag
ctaaagcttgaggtaaactctgggaaactagacacaaggcaggcaaaagaacatgaatca
atacagctcgctgatacaattttcagttccataaatctagatgaaaataaacctgttgag
catcctaaaaccccctccccgctaaccattaccgtcactgaaacacagcctatgtgtgag
gaacaagagacaccacaggaagatcagaataatgcaggtccagacagatctaaccaattc
caaaaaacacagcctgtgcacgaggaagatgaaggacaggacaaagagctcagtagcaag
atgcctagcagaagatcaagcagaggaagaccaaaaaaacaagaggaggtctcacagcct
tctgagggtgttgtccatcacactattgcagaaactcaactaatttgcgaggaaggaaat
aaaaatgatgaagatcagaatgtcggagtgaaatccagaaggagtcgcagggggagacca
agtaagaaggacgatgttccacaacctgttgagtctgaggaaaaaactgaggaggaagat
atgaacagtgttctcagatctaagcggtcccgcagaggaagacaaacagatgaaggagaa
cctgcaaagtcccttgaaccaaattctgatgtcaacgttgtcgaagaagaacatactaat
gcagggagatcatgtcagacaagaaaagttggtggcaaaagacaaagaaaagagaagaca
gaccaggaaaatgagtcgggtgcatcttctaagggcccagacagagctaggaaagggcag
gaggggaaaagaaataggagacaagcattatctgaggaagaggaggaaagtgaagaagaa
aaaacaagaaggataggaacaagaaggactggaaagaaacagaaatgtaaggaaatgata
ggagagcaagaattaaaggaggacatggagaacaatgtccaagaggagaaagagaaagtt
gaaaaagagctgcaagaacaggaggcgagagagagattagaaagagaggaacaagagaga
ttggaatgtgaaagaatggaaaatgaagaacgtgaagagagagggaggcaaaatctcgaa
cgagagcagaaggaattagaagagaaagaacgattgaaaagggaagaagaggaaaagcag
aaagaagaaaaggagacaatggaccaaataaagagtgaaaaggaggaaagaaatcggtta
gaaaaagagttgaaagaaaaattagagaggcaacggcttgaaaaggaagaggaggaaaga
atccagagagagaagatggagaaagaacaaaaagagaaagagcatttacaaagaatagaa
gcggagagagaacaattagagaaggagagacaagaaaatgagatgcttgagatggcagca
caagcacaactgaacagagaacaaaaagagacaaaccaacaggaagaacaaaagaatgag
acgccggaggagaaaaacacaaagctaaatgctttttcagtttctcccaatgatgatgtc
cctgtcagacgatcacgacgccattctaactcctctgtgaactctgaacaatcagtttca
tctcaacaggagcagtccagtcagagaggcagaggccgagggaggggcagggggcggggc
cgagggagaccgacaactactgtacagccagttggtggcagacaaagcggcaggacaaaa
accatcccagggcctgctgatgatgttgatgaaacagagcaggtgtccataactccttcc
cgatcccgctccagttctagaagttctgacagatcgtctcatagcatgggaactcaaaat
caaatgacgagaggtagaggaagaggcagaaagagtttgaaattaccagaaccagaggag
gaagttttccaacctaaaaccccaggaaggggcagggggaaaggaagcaggaaaggaaca
aatgttgagataaacactaaacaagatgaagatgtagtcgaagaggccgtcgtgcctcaa
accaacagcagagggcgtaagagaacagccactgccagcacatcctcagtagagactccg
ccacccacacctaagacaccaagacgctccacaaccagtcagatgcaaagggttttattt
actgggctaacggatgaggatggagaaagagtggttgcccggttgggtggcagcctggca
aagggggtgaatgatatgactcacctggtcactgataaagctagacgcactgttaaattt
ctatgtgcaattgccagaggagtgcctatagtgacccctgactggctcaagaagtgtggc
aaagccggccatttcctttctgctgatgaatatttattgaaggatgttgagcaggagaag
aagtttagtttcagcctacaggcggcactgcaggcggctctacgtcaacctcttttgaag
ggttatgagattcatgtgacatcatcagtaataccagagccatctcagatgaaagaaatc
attacctgttgcggagcacgtttccttcctaaaatgccctcttctcgtaaggagcacaca
gtggtggtgtcatgcgagcaagacagggagctttgtgagaaggcatcgagaatgtcattg
ccggtggtcagcacagagtttctattgactggtattctgcagcagaaagttgacttgcag
gcctattctctcacatcctctctcaatgcagccaatcagaccgcagcccccaaagcgcca
gccaggggccgtaggaagtag

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