Triplophysa dalaica: 130433327
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Entry
130433327 CDS
T09616
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130433327 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130433327 (rad54b)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130433327 (rad54b)
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
130433327
NCBI-ProteinID:
XP_056619123
EnsemblRapid:
ENSTDLG00000015998
LinkDB
All DBs
Position
12:complement(6493586..6506159)
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AA seq
909 aa
AA seq
DB search
MRRSGAPSQLRGNATKKPRFMPPGPAQNDDLSRVVLGPSPPSAPALGNVLLNKVQVCLSS
ADAPAVSKAPAGSKALARVLSAVPQGESKENSNRCSSDFSETNQSDKDSCPIQPHTQPNS
TSTARYYSVMWCKASSRKHKRWEGDAVLVAKGRSVELKDMEGRDIGRGSGYKASELESLC
EGQTLMVGGKQIEVMGVISNEDYAKGRCFKDASVETPAETVVKAAVYRPLAKSFTRPAFK
GGAIQDSHPEGAPCKPRHDPNAAGALVMPRPSTDHQWVHNKSGSSLVDVVVDPHLTNNLR
PHQREGVVFLYECLVGMRLAGRCGAILADEMGLGKTLQCVCVLWTLLRQGPYGGRPVLKR
ALVVCPGSLVKNWAAEFNKWLGRERISVYTVDQDHRVEDFVSSPLCSVMVISYEMLLRSV
DRLKELDFGVLVCDEGHRLKNSNIKTSGALTALSCERRLILTGTPVQNDLQEFYSIIDFV
NPGILGTSAGYRKIYEEPILRSRQPTCTEEERSIGEERAAELFRLTGVFTLRRTQEIINK
YLSERIEWTVFCKPTELQLRLYGVLLATLPIKASLSSGGTHAHSPHLACINALKKLCNHP
GLLYNTLQEKMSEMFEDGVMELFPQGYSTGAFSTADSGKLLVLTDLLSAIQQVNNKDRVV
LVSNYTQTLDLLQNVSDHIGYKWCRLDGQTPVAQRQRIVDSFNSPHSSNFLLLLSSKAGG
VGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQKKIVHIYRLLTTGSIEEKIYQRQVS
KQGLSGTVVDLTKKGEHISFSAEEMRDLFTFDSNTSCLTHDLLDCQCSGDGNTPGVVKEV
SEETGRACQLGRHANSAAASPQRVSMSELMQWRHFAGTIQSYEDIYLNRACNHITYAFQS
TTSKSQPTV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggtctggagctccgagtcagctccgcggcaatgctacaaagaaaccccggttt
atgcctccgggtccggcgcagaatgatgacttatcgagggttgtattgggaccgtcaccg
ccatcagcacctgctttagggaatgtgctgctcaataaggtccaggtgtgtttgagtagt
gcagatgctccagctgtgtctaaagctccagcaggcagtaaggctttagccagagtcttg
agtgctgttcctcaaggggaaagtaaggaaaacagtaacaggtgttcatcggacttttct
gaaacaaatcaatcagacaaagacagctgcccaatacagccacacactcaacccaactct
acgtctactgcacgctactacagtgtaatgtggtgcaaggcatcatcaagaaagcacaag
cgctgggaaggtgacgctgtgctggtcgccaaggggcggagtgttgagctcaaagacatg
gaggggcgggacattggacgaggatcaggctataaagcctctgagctggagagtctgtgt
gagggtcagactcttatggtgggagggaagcaaattgaggtaatgggggtaatttccaat
gaggactacgccaagggccgatgttttaaagacgcttccgttgagactccagcagagaca
gtggtgaaggctgctgtatatcgaccgctggccaaatcctttacgaggccagcgtttaag
ggaggagcgatacaagattcccatcctgagggagccccctgtaaacccagacatgacccc
aatgcagcaggagctcttgtgatgccacggccatcaaccgatcaccagtgggtacataat
aaatctggatcttcattggtggatgtggtcgtggaccctcacctgaccaataatcttcgg
ccacatcagagagagggcgtggtctttctttatgaatgcttagtgggaatgaggttggct
ggtcgctgtggggctattcttgcagatgagatggggcttgggaagaccctgcagtgtgtc
tgcgtgctgtggacactattaagacagggtccctacggtggacggcctgtgcttaaaaga
gcgcttgtggtgtgtcctgggagcttggtcaagaactgggccgctgagtttaacaagtgg
cttgggagagagaggatcagtgtttacacggtggaccaggatcaccgtgtggaggatttc
gtgtcgtcccctctttgctctgtcatggtgatcagttatgagatgttgctgcgctcggtg
gacagattgaaagagttggactttggagtgctcgtctgtgatgaaggtcatcgactcaaa
aacagcaacatcaaaacatccggcgcactcactgctctttcctgtgaacgccgtcttata
ttaacagggactccagtgcagaatgacctgcaggagttttattccatcatagattttgta
aatccaggaattctgggaacatctgcaggctacaggaagatttatgaagagccaatttta
agatctcgccagcccacctgcacggaggaggaaaggtctattggagaggagcgtgccgct
gagctcttccgtcttacaggcgtgtttaccttgcgacggacacaggagatcattaataag
tacttgtcggagcgaatcgagtggactgtcttttgcaaacccactgagctgcagctgcgt
ctttatggagtccttttggccacacttcccatcaaagcctctctctccagcggcggcaca
cacgcacacagcccacacctcgcttgcatcaatgctctgaagaaactctgcaatcacccc
gggctgctctataacactctacaggaaaaaatgtctgagatgtttgaggatggagtgatg
gagctcttccctcagggctactccactggtgccttcagtaccgctgactctggaaagctt
ctggtgctaacagacctgctgtctgcaatacaacaagtcaacaacaaagacagggttgtt
ttggtctccaactatacacaaacgctcgatttgctgcagaatgtcagcgatcacattggt
tataaatggtgtcggcttgatggtcagacccctgttgcccagcgacaacgaattgttgat
tctttcaacagcccgcactcctccaacttcctgttgctactcagctctaaagctggaggg
gtggggcttaacctcattggtgcatcccatcttgttttatatgatatagactggaaccca
gccaatgacatacaggctatggcacgagtgtggcgcgacggacagaagaaaatagttcac
atctacaggttacttacaacaggttccattgaagagaagatttatcagaggcaggtgagt
aaacagggactttctgggacagttgtggacttgaccaaaaagggtgagcatattagcttt
tctgcggaagagatgcgggatcttttcacctttgactcgaatacctcctgcctcactcat
gacctactggactgccagtgttctggagatggaaacacaccaggtgttgtgaaggaggtg
agtgaggagacaggaagggcatgtcagctcggtcgccatgccaacagtgcagcagcatct
ccacaacgtgtcagcatgtctgagcttatgcaatggaggcattttgcaggaaccatccaa
tcatatgaggacatttacttaaatcgtgcttgtaaccacattacatatgcctttcagagt
accacttcaaaatcccaacccactgtataa
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