Triplophysa dalaica: 130433335
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Entry
130433335 CDS
T09616
Symbol
itga10
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-10
KO
K06586
integrin alpha 10
Organism
tdw
Triplophysa dalaica
Pathway
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
tdw04810
Regulation of actin cytoskeleton
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130433335 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130433335 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130433335 (itga10)
04810 Regulation of actin cytoskeleton
130433335 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130433335 (itga10)
Cell adhesion molecules [BR:
tdw04515
]
Integrins
Integrin alpha subunits
130433335 (itga10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_3
FG-GAP_3
vWA_SIBA-E
ITGAX-like_Ig_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
130433335
NCBI-ProteinID:
XP_056619135
LinkDB
All DBs
Position
12:complement(9853843..9882598)
Genome browser
AA seq
1171 aa
AA seq
DB search
MEIYKYLLYLKIAVLLQGLCKCFNIDVKRPRIFSGPEDALFGFSVLQHDNKGEKSILVGA
PWDGPHNNRKGDIYKCVVEDEINSNCSKANLGENVFQNVSRNPKNSHLGMTLTPTASDGF
LACAPLWSQECGAYVFSTGICASVTNDMEPKDVIAPTAKRCTTYMDIVIVLDGSNSIYPW
NEVQNFLSNILSKFHISPEQMQVGVIQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETHTAEAIRMACTEAFSPERGAREGATKVMIVVTDGESHDGEDLPDVLTECEKRNITRYA
IAVLGYYIRVKKNPTAFIKEIKSIASDPDEKYFFNVTDEAALNDIVDALGERIFSLEGTL
GYNESTFLEEMSQIGFSTHILDDGILFGMVGAYDWDGGILKETSKGRLMPSREAFEKEFP
LELKNHAAYLGYTVSSVVVGDWRRLYVAGAPRFKHKGKVILFDLTPDGDVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCLDGDGFAPNGTLHSQ
RKVQDARFGYAMAVAPDLNYDGYTDLLVGAPLEDDHQGAIYIYHGDEYYIIPQYKQRIAG
SSISAGLQYFGRSLSALLDLDGDELLDLAVGAQGSAVLLRSRSIVQINASLYFQPHSINV
IQKNCHRAGRDSACLNATVCFMAMSRSPGSNGTYFDIQMEALLDDRKILARALFDNSSQR
QSLLGVSIRVGEKICSMLPFHVFDTADYIRPISFTVRFKINDTDNSPVLDEGWPTTLKKS
IAFFKDCGEDDVCVTDLSLQARMDISGTRQKPYVIRGPRRRLAVEVQLQNRLENAYNTSL
TLHYSKNLHFSSLSIREDVQFKMECTALSSNSHSCNVSYPVFRSYSKVNFMLEFEFSCTS
LNSKVQIKLVAESDSVESVDTLSDNSVQLQSVVQYEPELFITSESNLNRYEVHPTRTVSE
GXGPEFYTHFRVQNSGCYAVRNLELSVNLPSVASGDRVFATVVDAFSQNASGVSCRIVSD
VAQLKSMQRDVRPLHPEDMKKTELLNCSSSWCVEVVCNVQQLLKGEMAKIRITRRIHDNF
FRQAKFKAVTIVGSYQLSATESNLITIGDAALLRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFILWKLGFFTRKQRKEEDEKNDS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagatttataagtacctgttgtatttgaaaatcgcagttcttcttcaagggctgtgc
aagtgttttaacattgatgttaagaggccgcggatctttagtgggcctgaagatgctctg
tttggcttctctgtgctacagcatgacaacaagggagagaaatcaattctggttggtgct
ccatgggatgggccccacaataacagaaagggagatatttacaagtgtgttgttgaagac
gagatcaattcaaattgctcaaaagctaacctaggtgaaaatgtttttcagaatgtgtct
cgtaatccaaagaattctcatttggggatgaccctgacccctactgcttcagatggattt
ttggcatgtgctccgctgtggtctcaggaatgtggtgcatatgtgttcagcactggaatc
tgtgcatctgtcaccaatgacatggagcccaaggacgtcattgcacccaccgctaagagg
tgcaccacatacatggacatcgtgattgttttagatggttctaacagtatctatccttgg
aatgaagtgcagaacttccttagcaacatcctcagcaagttccacataagtcctgagcag
atgcaggtgggtgtcattcagtacggagagatctcagtccacgagtggtctctcagggac
tatcagacaacacaggacgtggttgaagcagccaagaacatcagccgccaggagggccga
gagacgcacactgctgaagccatccgaatggcctgcacggaggccttcagtccagagaga
ggtgcgagggaaggggccactaaagtgatgatagtcgtgactgatggagagtcccatgac
ggagaagatcttcccgatgtcctcactgaatgtgaaaaacgcaacatcaccagatacgca
attgctgtattaggatattatatccgggtaaaaaagaatccaacggccttcatcaaagag
attaagtctattgcgagtgaccctgatgagaaatacttcttcaatgtgacggatgaggct
gcactgaatgacattgtagacgcactgggtgaacgcatttttagcctagaggggactctg
ggatacaatgaaagcacctttcttgaagagatgtcccagattggtttttcaacacacata
ttggatgatggcatcttgtttggaatggtgggtgcgtatgactgggacggagggatcctg
aaggagacttcaaaggggcggctcatgccctcacgggaggccttcgagaaagagtttcca
ctggagctaaagaaccatgcagcctacctgggttacactgtgtcctcagtggtagtagga
gattggaggaggttgtatgttgctggggcacccagattcaaacacaaaggaaaagtcatt
ctgtttgatctcacccctgatggtgatgtcataatcacacaggccctgaatggtgaacag
attggctcatattttggcagcgaggtgtgcgttgtggatgtagatcaggatggaataaca
gatatcctgctcatagccgctcccatgttcctgggagcagggaacaaagaaacaggaaaa
gtctatgtctactgtctggatggggatggtttcgcaccaaacggtacgcttcattctcag
cgtaaggtgcaggatgcacggtttggttatgccatggctgtagctcctgatctaaactat
gatggatacacagacctgctggttggagctccactggaggatgaccaccagggtgctatt
tacatctaccatggcgacgaatactacatcataccacagtacaaacaacgaatcgctggc
tcctccatctctgcggggctgcagtattttggccgtagcttgagcgctttgctggatctg
gatggggatgagttattggatcttgctgtaggagcacagggctccgcagtcttgctgaga
tcgaggagtatagttcagatcaacgccagcctgtacttccagccacactccattaatgtg
atccagaagaactgccacagggctggccgagactccgcgtgccttaatgccacggtctgc
ttcatggccatgtcccgctctcctggctcaaatggcacatattttgatattcaaatggag
gccttgttggatgacagaaagatcttggctcgcgctctgtttgacaacagctcacagaga
cagagtctactgggcgtcagtattcgtgttggagaaaaaatatgctccatgctaccattt
catgtttttgacacagctgattacattaggccaatcagcttcaccgtgcgctttaaaatc
aatgacacagacaacagccctgttctggatgaaggctggccaacaacattgaagaagtcg
atcgcatttttcaaagactgtggggaggatgacgtgtgtgtaacagatctgagtctgcag
gcacgtatggacatttctgggactaggcagaagccatatgtgatacgcggcccacggcgg
aggctcgcagtagaagtacagctccagaaccgtttggaaaacgcttataacaccagttta
actctgcattactcgaaaaacctgcattttagcagcctgagcatccgggaagatgtccag
tttaagatggagtgcacagcactaagctcaaacagtcactcctgtaatgtgagttatccg
gtgtttcgctcttattcaaaggtaaacttcatgctggaatttgagttcagttgtacatct
ctcaacagtaaggtccagataaagcttgttgctgagagtgacagcgtggagagtgtagac
acactgtcggacaacagtgttcagttgcagagtgttgttcagtatgaacctgaactcttt
atcacaagtgagtccaatttaaaccgctatgaggtccaccccaccaggactgtgtcagag
ggancagggcctgagttctacacacatttcagggtgcagaactcgggttgttacgccgtc
aggaatcttgagctaagtgtcaatttgccgtccgtggcttcaggggacagagtttttgca
acagtggttgatgctttctctcagaatgcatcaggtgttagctgcaggatagtcagtgat
gttgctcagctgaagtctatgcagcgagatgtacgtccacttcacccagaagacatgaag
aaaactgaactgttgaactgcagttcatcgtggtgtgtggaggttgtgtgtaatgtgcag
cagctactgaaaggagagatggccaagatccgcatcacaagaagaatccatgacaacttc
tttagacaggccaagttcaaagcagtgacgatagtgggctcctaccagttgtctgctacg
gagtccaatttgattacaataggagatgctgccctcttgagggagaccgttttggaagtt
ctgaaggggcgttcgatcccaatttcactttggattctgattggcagtatcattggagga
ctgctactactcgccctcttagtattcatcctttggaagttgggctttttcacaaggaaa
cagaggaaagaggaggatgagaaaaatgacagctga
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