KEGG   Triplophysa dalaica: 130433441
Entry
130433441         CDS       T09616                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
tdw  Triplophysa dalaica
Pathway
tdw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130433441 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tdw03400]
    130433441 (xrcc1)
DNA repair and recombination proteins [BR:tdw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     130433441 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 130433441
NCBI-ProteinID: XP_056619291
LinkDB
Position
12:23011533..23023522
AA seq 611 aa
MPEIKLKHVVSCSSEDHTHKADNLLSSDTYRKWKAVKPGEKQTSVILQFEKEEQIHSIDI
GNEGSAFIEVLVGHSTSVKDQDFEVLLVTSSFMSPTESRNGTNTNRVRFFGPSQLVKATG
QEKWDRVKIVCTQPYSKTMAYGITFIKFHSPPDGSEEAATSPAKLTKLGQFRVKDESPSS
SSSIQPGSLFFNRESSSKPSTGLKASPQNVKLSYAAAALKTEGSSAQSSNSTASQQVAAP
VKRKFEFSKERLDAPGPPSKRPTGSSEPSSTTPKSKARTSLSPSSKPSPGQKTEEKKKES
PKSKPEPKAKPKSKAAEPLALNRIMEGVVFVLSGFQNPFRGELRDKALAMGARYRPDWTS
DATHLICAFSNTPKYSQVKSAGGIIVRKEWVLDCHKRKDKIPLKRYQMDGGESSSESDAE
EEESEAETEQVKTPEKRHVTPQKQPIKKEEDEYGGSTDAEAPEEEGDSGMDTEDELNRVE
MERKRKGNVADVKDEDPFGGSTDENTDAEEEEDKPIPELPDFLTGKFFYLYGTFPDNQKR
QLQRYIVAFNGAVEDYMSEKVQFVVTSQGWDESFEDALMENGNLCFVKPSWILAINDRQK
MLPYQPHTVVP
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgcctgaaatcaaactcaagcatgttgtgtcctgcagcagtgaggatcatactcacaag
gcggacaacctcttgagctctgacacttacagaaagtggaaggctgtgaaacccggagag
aagcaaacttcagtgattcttcaatttgaaaaggaagagcagattcacagtatagatatt
ggcaatgaaggttctgctttcattgaggtcctcgtaggacattccacgtcagtcaaagat
caagattttgaggttctgttggtcacgtcgtcgttcatgtccccgacagagagccggaac
ggcacaaacacaaaccgagtgcgtttcttcggcccaagccagctggtgaaagctacggga
caggagaaatgggaccgagtgaaaattgtgtgcactcagccgtacagtaagacaatggct
tatggtatcacctttataaagtttcactcgccgccggacggcagtgaagaagcggccaca
tctccagctaaactaaccaaactgggtcagttccgggtcaaagacgagtccccgtcgtcc
agctccagtattcagcccggcagtctgttcttcaaccgagagagctcctctaaaccttcc
acgggccttaaagcatctcctcagaacgtcaagctgagttatgcagcggccgctctgaag
actgaaggttcatctgctcagagttccaacagtaccgcatcacagcaggtagcggctcct
gtaaagagaaagtttgagttcagtaaagagcgtctggatgccccgggtcccccgtccaaa
cgtcccactggctcatctgaacccagctcgacgacaccaaaatctaaagcaagaaccagt
ctgagtcccagcagtaaaccttctccaggccagaagacagaagaaaagaagaaagagagt
ccaaaatccaagccagaacctaaagccaaacccaagagtaaagcagcagaaccgctggct
ttgaatcgtatcatggagggggtggtgtttgttctgagcggctttcagaaccctttccgt
ggagagctgagggataaagcgctggccatgggagctcgataccgacctgactggacctca
gacgccacacacctcatatgtgcgttctccaacacacccaaatacagtcaagtgaaatca
gccggaggaatcatcgtcaggaaagagtgggtactcgactgtcacaaacgaaaagacaag
atcccactcaaacggtatcagatggacggaggcgagtccagttctgaaagtgatgcagaa
gaagaggagagtgaagcggaaacagagcaagtgaaaactccagaaaagagacatgtgacc
ccacaaaagcagccaatcaaaaaagaggaggatgagtacggaggttcaacagatgcagaa
gccccagaggaggagggggactctggtatggacactgaagatgagctgaacagggtggag
atggagaggaagaggaaaggaaacgtcgctgacgttaaagatgaagatccgttcggcggc
tccactgatgagaacacagacgctgaggaagaggaggataaacccatccctgaactgcca
gatttcctgacaggaaagttcttctatctgtacggcacgttccccgacaaccagaagaga
caacttcagcgctacatcgtcgccttcaacggagctgttgaagactacatgagtgagaag
gttcagtttgtcgtcaccagtcaaggatgggatgaatccttcgaggatgctctgatggaa
aatggaaatctgtgctttgtgaagccgtcctggatactggccattaatgacagacagaag
atgttgccctatcagccccacactgttgtaccttaa

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