Triplophysa dalaica: 130433550
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Entry
130433550 CDS
T09616
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
tdw
Triplophysa dalaica
Pathway
tdw03440
Homologous recombination
tdw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130433550 (palb2)
03460 Fanconi anemia pathway
130433550 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130433550 (palb2)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
130433550 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
130433550 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
130433550
NCBI-ProteinID:
XP_056619448
LinkDB
All DBs
Position
2:24981979..24988206
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AA seq
1291 aa
AA seq
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MEEDNDDKETLRRRLEVLKQEYEMTARRLQKAEHRDAVRRQGSVSHQNRFTLNESSLFCT
SSSVLASELSDNQDAEQLRTIDKRSSLFSTVEKIPAIQFQLAEIASTSPASMRSPTHRLR
SKRSRLRLQNKERESDTDYSQEKESLIQGKQSGCMEEKAKLKKERDIEILPCKVEKNKEL
PKKGKKDDTIAKETRKLQRSEKTEVNCADKTLVSSDENNMAFHTLNICQKQLPPLGSSKE
LQSRTAAYLDPIQTSSLPPSSESVHTDKSYGMLPSDSNKNINSSVMSGALDSCTLVEGLT
FPVEYYIRTTRRMAASQSSVNLEAVILSQLTGGRGRRKPSQSEMRGRGHVSSERPESVRR
STNQTGGRGKGQRRRGRRRTTIVRSPCSKAASDCTISLPASDSQLESPFGIDLKSTPQST
AQSELEERPQGDSQPIQLSVPTANLNPSKEDDFTKDFKHLPDSQLYFESKLLTDSNLYPI
FRRGRGLQIGEYSSQPQTCMSKDDHSPLPPSLSSLIQGLPDTKIGLLASVDIQDFHLPDE
DFGQLKLEKLRMSSSLVEPFVHRVYNTRRSNRYQTAWGRKDNGGELFTPEPPTSFTLEDS
LPLCQSDPVEQSQIEIQNTDQSEKHADHVNKPNSRSSDRIDSGEEQTSTIIKTEKTANDE
HTVKTQTSGNENVLKVDPEVELQMHKQTDSQTLSENSRLCPALLDFSPLLTSHTQRGQDH
SLPSLGLTPHFLSQGSPTDLQRLLFSPADSRRSPSSNMPTGCVSPDFVSRKTCGNVKANT
SMKSSDPTKVEGDTETQNQTEVRHEIIMGAQNNANHSATGYENSIVPETEMKALCIMERE
QKCSFDAENNPECKSKINCTSEIEVQPHNLSESAAQHTDRKHTDLKTETHKGMVMNQSQC
VDASGCAGHDEAISFDTSTNQQTEEKMVCTTNADEAKEHGSDFIHLSPVPTIILPKAGHC
SSLLREMHTFKALEGGCVLDLCFVRWTAEDLCICVAGEWSVCLWTQKKGVQLWSLIHTWT
FAQSVMSLQAIPDSSGLLCVTLGDLEITEARVLCCPSMDGPFTQNVVCQDALQALEGVSD
CRLVCCSTPGEQQKVTVITLSKEGRVVKTLSLVPAKQNIRTLATIEGEKDALIGWTECKT
LLIWSMKSGHLLQTIYLEKTLPMTNCMRGYSYRGVLCLLLQNTGNVCEEKSNTTLFALIA
TNPLTGKHITLTSISSPAQHIQQLIDGDVFGSGLVGVFQSGHIAVWDLRGRVAKVIGVLD
ELCRLARWAGPDTLLTGYLNGDVSVFQYNTV
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagataacgatgacaaagaaacattgagaaggagactggaagtactgaagcag
gagtatgagatgacagcacgaagattgcagaaggcagaacaccgggatgcagttcgcaga
cagggcagcgtatcacatcagaacagatttacactcaatgaatcatcactattctgtaca
tcttcctctgtgctggcttcagaactttctgacaaccaagatgctgaacagttacgaact
attgataaaagaagctctctgttttcaaccgttgagaaaatccctgcaattcaatttcaa
cttgccgagattgcgtccacatcccctgcaagcatgcgaagccccacccaccgtctgcgt
tctaagcgcagccggctgcgactgcagaacaaagagcgagagtcagacactgactacagc
caagagaaagaaagtctcattcaaggaaaacaaagtggttgcatggaggaaaaggctaaa
ctgaaaaaagaaagagatattgagattttaccatgtaaagtggagaagaacaaggagtta
ccaaaaaagggaaaaaaagatgatacaattgcaaaggaaacacggaagctacaaaggagt
gaaaaaactgaagtgaactgtgcagacaaaacactggtttcaagtgatgagaataatatg
gcctttcatactctcaacatttgccagaaacagttgcctcctctcggtagttctaaagag
ttacagtcaagaacagctgcgtatttggaccccatccagacctcctctttacctccatca
tctgagtcagtacatactgacaaatcatacgggatgcttccttcggattcaaataaaaat
attaactcttcagttatgtctggagctctagactcttgtacgctggtcgaaggtttaact
tttcctgtggaatattatattagaacaacacgtcgcatggctgcatctcaaagttctgtc
aatctcgaggctgtcattctgagccagctcactgggggacggggcagacgcaagcccagc
caatcggaaatgcgtggtagaggtcacgtgagctcagaacgtccagaatcagtacgcagg
tcaaccaaccagaccggaggtagaggaaaaggtcagaggagaagagggcgtcgtagaacg
actatagttaggagtccttgttccaaagctgcttcagattgtacaatatcacttcctgca
agtgattcacaattggagagtccgtttggtatagacttaaaatcaacccctcaatctact
gctcagtcagaattggaggaaaggccacaaggagattctcagccaatccagttgtctgtg
cctacagcaaatttgaatccaagtaaagaggacgatttcacaaaagattttaagcacctc
ccagattctcagctttattttgagtctaagctcctcacggattcaaatttgtatcctata
ttccggagggggcgaggcctccagattggagaatactcatctcagccccagacatgtatg
agtaaagatgatcactcacctctcccgccatcattatcttcactcattcaaggtctacca
gacaccaaaattggactgctggcatctgttgacatccaggatttccacttaccagatgag
gattttggtcaactgaagttggagaaactgcgtatgtcctcttcactagtggaaccattt
gtccatcgtgtatacaacacacgacggagcaacaggtaccagacagcgtggggcagaaag
gataacggtggagaactatttactccagaacctccaactagcttcacccttgaagatagt
ttacctctttgtcagtcagaccctgttgaacaatcacagattgagatacaaaacactgac
caatcggaaaaacacgctgaccatgtaaacaaaccaaacagcagatcctcagatcggata
gacagtggagaggaacaaactagcacaataatcaaaacagagaagacggcaaatgacgaa
cacactgtaaagacgcaaacctcaggaaacgaaaatgtgcttaaagtagatcctgaagtg
gaattgcagatgcacaagcaaacggattcgcaaaccctctctgaaaacagccggctgtgt
ccagcgttactagattttagtcctttattgacgtcacacactcagagaggtcaagaccat
tccctgccgtctttgggattgaccccacattttttaagtcaaggttcacccacagatctt
caacgtcttctcttctctcctgctgacagccgtaggtctccctcttcgaacatgcctaca
ggttgtgtgtctccagattttgtctcacgcaaaacatgtggaaatgtcaaggccaacacc
tctatgaagagttcggatccaaccaaagtagagggagatactgagacacagaatcaaact
gaagtccgtcatgaaattattatgggagctcaaaataatgcaaaccacagtgcaacagga
tatgaaaactcaatcgtgccagaaactgaaatgaaggctttatgcatcatggaacgtgaa
cagaaatgcagttttgatgcagaaaacaatccagaatgtaaaagtaaaattaattgcaca
tctgagattgaagttcaacctcacaatctttctgaatctgcagctcaacatactgaccgt
aaacacactgacctcaagactgaaactcacaaagggatggttatgaatcagtctcagtgt
gtagatgcatctggctgtgcaggtcatgatgaggcgatctcatttgatacctccaccaat
cagcaaacggaagaaaagatggtgtgcaccacgaacgccgatgaagcgaaggaacatggc
agtgattttatccatttatctcctgtacctactataatccttcccaaggcaggacattgt
tcctcattgcttcgggagatgcacactttcaaggcccttgagggtggatgcgtcttggat
ttgtgtttcgtacgatggacggcggaggacttgtgcatatgtgtggcgggtgaatggagt
gtgtgcctttggactcaaaagaagggagttcagctttggagtcttatacacacctggaca
tttgcacagtctgtcatgtccttgcaagcgattccagactcctcaggtttgctttgtgta
acactgggtgacttagaaatcacagaagcacgagttctttgttgtccaagtatggatggg
ccgttcactcagaatgttgtgtgccaagatgcactacaagcattggagggcgtgtctgac
tgtcgacttgtgtgctgctctacccctggagaacagcagaaagtcactgtcataacgtta
tccaaggagggaagggtagtgaaaactctttccctggtccctgcaaaacagaacattcgg
acactggcaaccatagaaggggaaaaagatgctttgattggttggacagaatgtaaaacc
ctcctcatatggagtatgaaatcaggccatctgcttcagactatatacctggaaaagact
ttgccaatgacaaactgcatgaggggatactcatacaggggtgtgctttgtttattactt
cagaatactggaaatgtatgtgaggaaaagagtaacacaaccctttttgctctgattgct
acgaatcccctcactggcaaacacatcacactaacctccatcagcagccccgctcaacac
atacaacagctgatagatggtgatgtcttcggatctgggcttgttggcgttttccagtct
ggtcatattgctgtttgggatctcagaggaagggtggcgaaagtgatcggggtgcttgat
gagttgtgcagactggctcggtgggcggggccagacacactgctgactggctatctgaat
ggggatgttagcgtgtttcaatacaacactgtataa
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integrated database retrieval system