Triplophysa dalaica: 130433900
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Entry
130433900 CDS
T09616
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tdw
Triplophysa dalaica
Pathway
tdw03040
Spliceosome
tdw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130433900 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130433900 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130433900 (srsf5b)
Spliceosome [BR:
tdw03041
]
Common components
Common spliceosomal components
SR proteins
130433900 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
RRM_5
DUF7376
SET_assoc
Motif
Other DBs
NCBI-GeneID:
130433900
NCBI-ProteinID:
XP_056619666
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All DBs
Position
13:complement(13880167..13887259)
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AA seq
295 aa
AA seq
DB search
MSGCRIFIGRLNPSAREKDVERFFKGYGKIRDIDLKRGFGFVEFDDPRDAEDAVYDLDGK
ELCNERVTIEHARVRLRGGRGRGGSSSSSGGGGGGGGGGGGGGGGGGGGGGRFPGRYSRG
SQDSRRNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFAS
HSDLKNALEKLSGKEINGRKIKLVEATKKKSRSRSRSNSSSRSRSRGRSPSRSRSRSRSH
TPKSRNRSRSRSRSPSTSPVRPKEVKGGSRAESASPPTPVPRPPPSRSPSTDSRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttgtcgtattttcatcggtcggttaaatccctccgctcgagagaaggacgtc
gagcgtttcttcaagggttacgggaaaataagagacattgacctgaaacgaggctttggc
tttgtggaattcgacgatcctagagatgcagaagatgccgtctatgatcttgatggaaaa
gagctctgcaatgagagggtgaccattgaacatgcccgtgtccgtctacgtggggggcgg
ggtcgtggtggtagtagtagtagtagtggtggtggcggaggcggcggcggcggtggtggt
ggaggaggaggaggaggcggaggaggaggaggacgtttccctggccgttacagtcgtggc
tctcaggacagccgaaggaatcctcccccaatgcgcactgagaaccgtctcatcgtggag
aatttgtcctctcgagtcagctggcaggatttgaaggatttcatgagacaggctggagaa
gttacttttgcagatgcccatcgcccaaagctcaatgagggtgtggtcgagtttgcatcc
catagtgatctaaaaaatgcactggagaagttatctgggaaggagatcaacggcaggaaa
atcaagcttgttgaggcaaccaagaagaaatccaggagtcgctcccgttcaaacagctca
tcccgctctcgttctcgtggacgctccccttcgcgatcccgtagtcgctcccgatcacat
actcccaaatcacgtaatcgctccagaagtcgctcccgatcccccagcacttctcctgtg
cgacccaaagaagtaaagggtggatcacgtgccgaatctgcatcgccacccactccggtg
ccacggccaccaccgtcccgttccccttccaccgacagtcgtcattag
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