Triplophysa dalaica: 130434040
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Entry
130434040 CDS
T09616
Symbol
usp24
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 24
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdw01002
]
130434040 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130434040 (usp24)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130434040 (usp24)
Peptidases and inhibitors [BR:
tdw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130434040 (usp24)
Ubiquitin system [BR:
tdw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130434040 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
Motif
Other DBs
NCBI-GeneID:
130434040
NCBI-ProteinID:
XP_056619880
LinkDB
All DBs
Position
13:7869993..7923023
Genome browser
AA seq
2624 aa
AA seq
DB search
MMETEEEQHMTTLLCMGFADPVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGP
SPGSGLSGEGENSGRTGTGGFDPPPAYHDVVESERSNDENGNCSGNSMEFPTTNLYELES
RVFTDHWSIPYKREESLGKCLIASSCLARMGLADADENCKRFIDRCMPEAFKKLLTSSAV
HKWGTEIHEGIYNMLMLLVELVAERVKLDPIPIGLLGVLTMACNPDNEYHFKNRMKACQR
NWAEVFGEDNMFAVSPSSSYQKEPHGWLVDLVNRFGEMGGFTAIQCKLNQEEIEIGCVSA
LVQPLGVCAEYLNSNLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCM
RFQRELVNVVDDLRLDILLRMLKTPHFSAKMNSLKEVTKLIEESTVSKTVKNAIDTDRLL
DWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWKIQAGQSSTVIENI
HTIIAAAAVKFNFDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLE
VLWELAHLPTLPTTLVQQALEEHLTILSDAYAVKETVKXNYIIKCIEDIKKIQIQEDSKS
PSETQVSFLTGTWGRKKPSSLAKSSQQSNPQTVWVVPALRQLHEITRSFIKQTYQKQDKS
IIQDLKKNFEIVKLITGSLVSCHRLAVSVSGSNGLSGSTLVDGRYSYQEYLEAHLKFLAF
FLQEASLYLVWNRAKEIWECLVSGMDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKIL
KLEPYEITMNGFNLFKTFFENVNLSDHRLKRQGTQLCVERLDLAGMDFIWRIAMESPDED
IANEAIQLIITYSYINLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRAT
KMLTATAMPTVATSVQSPSRSSKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFHG
HPVTLHVTYESTKDTFTLEAHSNETIGSIRWKIAEQLSCPVDNVQIFANDSMLTMNRDQK
LLNQLGFSDEQSLTVKSSGTGTPSGSSADSSASASSSSSGVFNSAYALEQEKSLPGVVMA
LVCNVFEMLYQLANLEEPRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFT
LGSGSQASKSPSLSSKQQHQQSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDD
EMAKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQA
MPSILDEELSKEGLDTLSSRPFRNAGRQSGRQLSVCGTPEKSSYRQVSMSDRSSIRVEEI
IPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSSQPIRETTNSLLPLGVRSRV
SSTGSNCSSGSEGEVTSLQAGICVKQLSVSIKDTIIAREALSLLVTCLQLRSQQLCSFYS
LPSVNDFIIDILLGSSSCEIRHVACDQLYTLSQSDTSAYPDLQKPNLFLLKVVLTAQLPL
WSPTSIMRGINQRLLSQCTEYFDLRCQLLDDLTTSEMEQLQISPAVMLEDEISWLDNFEP
TWTSELETSEADNILLAGHLHLIKTLLSLCGNEKEQFGPSLILQLLDDFLFRASRIILNS
DSSSSTTASIHDFHPKCSTVSSRLAAYEVLVMLSDSSLTNMQLITKELLSMHHQSDPSLT
KEFDYLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAVLSIEDDTENPEESV
FCQVQSLFGHLMESKLQYYIPENFWKIFKMWNKELFVREQQDAYEFFTSLVDQLDEHLKK
IGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVL
DGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWVLN
MEPYTVSGMARQDSSVDHGDNGRGGEAGSGGSPRKKVTISENYELVGVVVHSGQAHAGHY
YSFIKDRRARGRWYKFNDNVVEEFDMNDETMEYECFGGEYRPKVYDQSNPYPDVRRRYWN
AYMLFYQRISDQNSPVLPKKSRVSIMRQEAEDLSLSAPSSPEISPQSSPRPPRANNDRLT
LLTRLVKKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYNSDYFSFTMSLASVNATKL
KHPSYQAMAKTSLQLAVQFLFHTYLRTKKKLRVDTEEWIATVDVLLSKSSEACQWMVQYL
VSPEGREIIKICLLECSVREVRVVVATVLEKTLESALYFQDPGLDCLLDMLLSLLDKDVP
DNCKNCSQYFSLFSNFAQRGTGPCQLLLKHSAYRRMIVFLLGSNRQSNQHRRWSSAQARE
FLHLHNTLALIVLHTDLASQKTEAQGVFKQSSSGLVASSSPLLPLDSDINTLLFKSEGQT
YLMEVMFAMRELSGPLSFLIEMITYCSFCNEPFTQEVLQLLKNHLETAPPHELKNVFQLL
LEILMIEDPLQSQRLKHAFETEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCSPAKDY
FKELSGHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEK
DQSGSSNGSDGSPANENSDRSLRQGSESPMMLGDSRSDLEDVDP
NT seq
7875 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagaggaggagcagcatatgaccacgctcttatgcatgggcttcgcagac
ccggtagccatccggaaagccctgcgcttggccaaaaacgacatcaacgaggctgtcgcg
ctgctcaccaacgaaagcccgggactcggatacggctacgagccgatggagagcggccct
tccccgggctccggtctcagcggggaaggcgagaacagcgggcgcacggggaccgggggg
tttgatcctccgcctgcgtatcacgatgtcgtggaaagtgagagaagtaatgatgaaaat
gggaactgttctgggaacagtatggagtttccaaccactaatctgtatgagttggaaagc
agagtgttcactgaccactggtccatcccatacaagagagaggaatctctcgggaagtgt
ctcatcgcctccagctgtctggccagaatgggcttggctgatgcagatgagaattgcaag
aggttcattgacagatgtatgcctgaggccttcaagaagttgctgacgtcaagtgccgtg
cacaaatggggaacagagattcatgagggcatttacaacatgctgatgctgctggtggaa
ctcgtcgctgagagagtcaaactggaccccatacccatcggcctcttgggagttcttact
atggcttgtaaccctgacaatgagtatcactttaagaatcggatgaaggcgtgtcagagg
aactgggctgaggtgtttggagaggacaacatgtttgctgtatctccaagctccagctac
cagaaggagcctcacggctggttggtggacttagtgaatcggtttggagaaatgggaggt
ttcactgccattcagtgcaagctcaaccaggaagagatcgagatagggtgtgtatcagct
ctggttcagccgctcggtgtgtgtgcagaatacctcaactccaacctggtgcaacccatg
ctggacccagtcatccataagatgataacttatgtgcagaatcttgaggaaaaagaccta
aaagacaagcgattggtgagtattcccgagctcttgtcggctattaagctcctctgcatg
cgtttccaacgggagctggtgaacgtggttgatgatctacggctggacatcctcctgcga
atgctcaagaccccccacttcagtgccaagatgaactcacttaaagaggttaccaaactc
attgaggaaagcaccgtttctaagactgtgaagaatgccattgacactgatagactgctg
gactggctggtagaaaactctgtgctctcaatagctttggaaggaaacattgaccaggcc
cagtactgtgacagaataaagggaatcattgagctgttgggcagtaagctctccttggat
gaactctccaaaatatggaaaatacaggctggtcagtcgtccactgtgatcgagaacatc
cacaccatcatcgctgctgccgctgtcaagttcaacttcgatcagctcagccacctcttc
gtcctcatacagaaaagctgggaggtggagagcgatcgtgtcagacaaaagcttttgagt
ctgattggacggattggcagagaagctcgatccgaggccaccacaggaaaggtgttggag
gtattgtgggaattggcccatctccccacccttcccactacactggtacagcaggctctt
gaggaacatctcaccatcctcagtgacgcatacgccgttaaagaaaccgtcaagnagaac
tacatcatcaaatgcatcgaggacatcaagaagatacaaatacaggaggattcaaagtct
cccagcgagacacaggtctcttttcttactggcacctggggcaggaagaaaccgagctca
ttggctaaatcgtctcagcagagtaaccctcagactgtgtgggtggttccagctttacga
caacttcatgagattactcgatcctttatcaaacagacctatcagaaacaggacaagagt
ataatccaggaccttaagaaaaactttgagattgtgaagttgatcacagggtcactggtg
tcctgccatcgtttggccgtgtccgtctctggatccaatggtctgtcggggtccacgctt
gtggatgggcgatactcctatcaggagtatttggaggctcacttgaagttcctcgcgttc
ttccttcaagaggccagtctgtacctagtctggaatagagccaaagagatctgggaatgt
ttggtgtctggcatggatgtgtgcgaacttgatcgagagatgtgtttcgaatggttcact
aaaggacaacatgatctggagagtgatgttcaacagcagctttttaaagagaagatcctt
aagctcgagccttatgagatcacgatgaacgggtttaaccttttcaagaccttctttgag
aacgtgaaccttagtgaccaccgtctcaaacggcagggaacccaactgtgtgtggagagg
ttggatctggcggggatggatttcatatggagaatcgcgatggagtctccggatgaggac
atcgccaatgaagccatacagctcatcatcacctacagttatataaacctcaaccccaaa
atgaaaaaagattccgtttccttacacaagaagtttattgctgactgctataagagattg
gaggctgctagctctgcgctgggtggaccgaccctcacacatgctgttacccgggcaacc
aagatgctgactgccactgctatgccaacagtcgctacatctgtacaatctccatccagg
tccagtaagctggtgatcattgagagacttctgctgttggcagaacgctatgttatcaca
atagaggacttgtattcagttcctcggaccattctacctcatggagcatctttccacggc
catcctgttacacttcacgtcacatacgaatctaccaaagacacattcaccttggaggcc
cacagcaatgagactataggcagcatcagatggaagattgcagagcagctcagctgtccg
gtggacaatgtgcagatatttgccaatgatagcatgctgacgatgaatcgtgaccagaag
ctgttaaaccagctggggttctctgatgagcagagtttgacagtgaagagctcaggaaca
ggaactccatcgggcagctcagcggacagctcggcctctgcaagctccagcagcagcggg
gtctttaactcggcgtacgctctcgaacaggagaaatcgcttcctggtgtcgtgatggca
ctggtgtgtaacgtctttgagatgctttatcagctggccaacctagaggaacccagaata
actttacgtgtgaggaagttgttgctgctcatcccgactgacccggaagtgcaggatgcc
ctcgataactttgtgccaaaagagtccagcgtctggagtcaccagaaaactctgtttaca
ctcggctcaggttctcaggcctcaaagtctccatctctgtccagtaaacagcagcaccag
cagagtgcagcgtccatcctggagtctctctttcgttcatccgctccgggcatgtctaca
ttcagagtgctttataatttagaggtgttaagctccaaactgatgccaacatccgatgat
gaaatggcaaaaaccagtgtcaaatctttctgcgagaactttctcaaagctggaggtctc
agtctggtggtgaacgtcatgcagagagactcaatcccctctgaggtggactatgagacc
agacagggtgtctattccatctgcctgcagttggccaggtttctgctggtagggcaggcc
atgcccagtatccttgatgaggagttgagcaaggagggtctagatactctgtcttctcgg
ccattccgcaacgccgggcggcagagcgggcgtcaactctccgtctgtggaactccagaa
aagtcctcctaccgccaagtgtctatgtccgacagatcctcgatacgagttgaggaaatc
ataccggctgcccgtgtcgccatacagacaatggaggttggagacttcacatccacggta
gcgtgtttcatgcggctcacctgggcagcagccgccggccgattggacctagtcggtagc
agtcagccaataagagagaccaccaattctcttctaccgctgggcgtacgtagcagggtt
agcagcacaggcagtaactgcagttctgggagtgaaggcgaggtcacgtccctacaggcg
gggatatgcgtcaaacaactgtctgtgtccatcaaagacaccatcatcgcacgagaggcg
ctttctttactcgtcacgtgccttcagcttcgctcccaacaactctgttcgttttactct
ttgccctctgtgaacgatttcatcattgatattctgctggggtcgtccagttgtgagatc
cgtcatgtggcgtgtgatcagctatacaccctgagtcagtcggacacttcggcataccca
gatctccagaagcccaacctcttccttcttaaggtggttctgacggcccaacttcctctc
tggtcccccaccagcatcatgaggggcattaaccaaaggttgctttcgcagtgcacagag
tattttgacctgaggtgccaactcctggatgacctgaccacgtcagagatggagcagctt
cagatcagcccggcggtcatgctggaggacgagatcagctggctggataatttcgagccc
acttggaccagtgagttggagaccagtgaagcagataacatcctgctggccggacatcta
cacctcatcaaaacgctgctttcgctgtgcggaaatgagaaagagcagttcggcccgtct
ctgatcctgcagctgctagacgacttcctgtttagagcatctcgaatcatcctgaacagt
gacagctcatctagcactacagcatctatacatgactttcacccaaagtgcagtacagtc
agcagtcgtctggcggcgtatgaggtgctggtcatgttgtccgacagctctctcaccaac
atgcagctcatcactaaagaactgctgtccatgcaccatcagtctgacccctccctcacc
aaagagtttgactatcttccacctgtagacagtcggtctgtgtctggttttgtggggctg
aagaacggaggtgccacatgctacatgaacgctgtctttcagcagctctacatgcagcct
ggactgcctgaggctgtcttgtccattgaagatgacacagaaaatccagaggagagtgtg
ttttgccaggttcaatctctgtttggccacttgatggagagcaaactgcagtactacata
ccggagaacttctggaagatctttaagatgtggaataaagagctattcgtccgtgaacag
caggacgcctatgagttcttcaccagtcttgttgaccagcttgatgaacatctgaagaaa
atcggccgagagcagatctttaaaaacacattccagggaattttctccgatcagaagata
tgcaaagactgcccacacaggtatgagcgtgaggagactttcatggctttgaatctggga
gtgacgtcctgtcagagtttggagatctcgctggatcagtttgtcagaggagaggttttg
gacgggagtaatgcctattactgcgagaagtgtaaagagaagcgaatcactgtcaagcgg
acctgtataaaatcgctgcccagtgtgctggtcatccacctcatgcgcttcggctttgac
tgggaaagtggccggtccatcaaatacgatgagcagatcagatttccctgggtgctgaac
atggagccgtatacagtgtcaggaatggctcgtcaggactcgagcgttgatcacggagac
aatggcagagggggtgaggccgggtccggcggatcacctcggaagaaggtcaccatctct
gagaattatgagctggtgggagtggttgtgcatagcggacaagcccacgcaggacactat
tattcattcattaaagaccgccgcgcaagaggacggtggtacaagtttaatgacaacgtt
gtggaggagttcgacatgaacgatgagaccatggagtacgagtgttttgggggagagtac
agaccaaaagtttatgatcagtctaacccctacccagacgtccggcggcgctactggaac
gcttacatgctgttctaccagcggatcagtgaccagaactctccggtgctccccaagaag
agccgtgtgagcatcatgaggcaagaagcagaagatctgtcgttgtcagcaccttcctct
ccagagatctcaccccagtcctctccacggccacccagagccaacaacgaccggctcacc
ctgctcacacgcttggtcaagaaaggagaaaagaagggactgtttgtggagaagatgcct
gcaaggatttatcagatggtgagagatgaaaatctgaagttcatgaagaacagagacgtg
tacaacagcgattactttagcttcacaatgtctctggcctctgtcaatgctactaagtta
aagcatccatcatatcaagcaatggcaaaaaccagcctgcagctcgccgtccagtttctc
ttccacacatacctgcgcaccaaaaagaaactcagggtggacacagaggagtggatcgct
actgtggatgtcctgttgtccaagagcagtgaagcgtgccagtggatggtacagtacctg
gtgtcacctgaaggccgtgagatcatcaagatctgtctgttggaatgcagtgtgcgggag
gttcgtgtcgtggtggccaccgtcctggagaagacgctggagagcgctctgtatttccag
gatccaggactggactgtctgttagacatgttgctctctcttttggataaagacgtccca
gacaattgcaagaactgctcgcagtacttcagcctcttcagtaactttgcacagaggggt
actgggccgtgtcagctgctgctgaaacattcagcctatcgccggatgattgtattcctg
ctgggatccaaccgacaaagcaaccagcatcgtcgctggagttctgcacaggctcgtgag
ttcctgcatcttcacaacacattggccctgattgtgctccacacggacctcgcgtctcag
aagacggaggcccaaggagtgtttaagcaaagttcttcaggactggtggcttcatcttct
cctctcctgcctctagattcagacatcaacacattgctcttcaaatctgagggtcagaca
tatctcatggaggtgatgtttgccatgcgtgagctgtcaggccctctgtcgttcctcata
gagatgataacatattgctccttctgtaatgagcctttcacacaggaagttttgcagtta
ctcaagaaccatctggagacagctcctcctcatgagctgaagaacgtctttcagctcctt
ctggagatcctgatgatagaggatcctctgcaatcccagcgactcaaacatgcatttgaa
actgaaaaggggcttctggcgttaatgcatcagagcaacaacgtggacagcagccgttgc
taccagtgtgtcaagttcttggtcacactggctcagaaatgttccccagctaaagactat
tttaaagagctctcgggacattggagctgggctgtgcagtggctacagaagaagatgtct
gaacactactggacgcctcaaagtaacgtgtcaaatgagacgtccacagctaaaaccttc
cagcgcaccatctcagcacaggacacattggcttatgctacagctttactcaatgagaag
gatcagtctggaagcagtaatggttctgatggcagtccagccaatgagaactccgacaga
agtcttcgccagggatcagaatcgccaatgatgttgggggattctcgaagtgatttggaa
gacgtggacccttaa
DBGET
integrated database retrieval system
