Triplophysa dalaica: 130434231
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Entry
130434231 CDS
T09616
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130434231 (prdm1c)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130434231 (prdm1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2HE
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_15
Zf-C2H2_ZNF451
TPR_21
Motif
Other DBs
NCBI-GeneID:
130434231
NCBI-ProteinID:
XP_056620220
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Position
13:21251043..21257017
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AA seq
613 aa
AA seq
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MPSKITANDGVTVHTEKHEWIRTSMQASFPRNLRFTYHNQKVGGVCTTTEIPAGTWFGPL
QGDRLHSEDTPLDVHGHHIWKISEGRLHHFLFHKDESSRNWMSFVKAAPSPWQQNLVERQ
VGMEIYFYAVRHLRPGEELFVGRRLENDKPITSLITSSQTSVCVERQNPVNKRKRGHTIT
EILESDYSFPNPPLLKETYSLPSKHEPKSRKADLISIGTHQKPSLTVVMPDISMTLRGLP
YMPTIPQSPLPRHISPIIQNVPLRQPSPHLSHNIPFPQIHMHPCLLRLASNESDLPLVNR
NDSRVPVKTASTSSLKEDTKAAYNRPTTPPPSLSNTANLFPGSSDEVINDITAQKDSPEV
GVATPSISSSTHHDTPGSHDPCVKPGQTVGHHNLPYPLQRQNGKIQYKCNVCEKDFSQLS
NLKVHLRVHSGEKPYRCVTCKRNFSQLAHLQKHTLVHTGEKPHECHVCNRRFSSSSNLKT
HLRLHSGERPYVCKQCPARFTQHIHLRLHRRLHTSPRPHQCQECLRKYTHLCSLQIHSHQ
FCPDTSTTGSASQLVLANEELESFDVSEAAQNLEVAMEMASVQRMCQLIWARVLAVPSSL
QQGAAQKRCEEGL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaatcacagcgaacgatggagtcaccgtacacacggagaagcatgagtgg
atcagaaccagcatgcaggcatcatttcccagaaacctcaggtttacatatcacaatcag
aaggttgggggtgtttgtactacaacagagattcccgcagggacatggtttggcccgctg
cagggagatcgtctccattctgaagacacaccgttagacgtccacggacatcacatctgg
aagatctcagaggggcgtttacatcacttcctgttccataaagatgagagcagcaggaac
tggatgagctttgtcaaagctgccccgtctccttggcaacagaatcttgtagaacggcaa
gttgggatggagatttacttctatgcagtaagacatctaaggccgggggaggagctattt
gtggggcggagactggaaaacgacaagccaatcacaagtctcataacttcctctcagact
tcagtttgtgtggagagacagaatccagtgaataaaagaaaaagaggtcataccatcact
gagatcctggagtctgactacagttttcccaatccacctcttctcaaagaaacttacagc
ctcccatctaaacatgaacctaaaagtagaaaagcagatctgatctcaatcggcacgcac
cagaaaccttcgctgaccgtagtcatgcctgacatctccatgactttgagaggtctccca
tacatgcctaccatcccgcaatcccctctgccgaggcacatctcacctatcattcaaaat
gtgccattgcgccagccgtcaccacacctatcccataatattccctttccacaaatccac
atgcatccatgtcttttgagattggcatcaaatgagagtgaccttccgttagttaacaga
aacgactccagagttcctgtgaagactgccagtacctcatctttaaaagaggacacaaaa
gcggcatataaccgacccacgaccccacctccatctcttagcaatacagccaatctcttt
cctggttcatctgatgaggtaatcaatgacatcaccgcccagaaagattcacctgaggtg
ggtgtggctactccgagcatctctagctccacccaccatgacaccccaggctcccatgat
ccatgtgtgaaaccgggccagacagtagggcatcataacctaccgtatccgttacagaga
cagaatggaaagatccagtataaatgcaacgtgtgtgagaaggacttcagtcagctctca
aatctgaaggtgcacttgagagttcacagcggtgagaaaccgtacaggtgtgttacctgc
aaaagaaacttttcccaactagctcatcttcagaaacacacactggtccacacaggagaa
aaacctcacgaatgccatgtgtgtaacaggcgcttcagcagcagcagtaacctgaagaca
cacctgcgtcttcactcaggtgaacggccgtacgtctgtaagcaatgcccggctcgcttc
acccagcacatccacctgcgtctgcatagacgtctgcacacctccccacgccctcaccag
tgtcaggaatgcctgcgcaagtacacacacctgtgcagcctgcagatccactcgcatcag
ttctgtcccgacaccagcaccacaggctccgcctctcagctggtcctagccaatgaagag
ctcgagagcttcgacgtgagtgaggccgcacaaaaccttgaggttgccatggagatggca
tccgtacagaggatgtgtcagttgatctgggcgcgggtgcttgcagttccgtcttccctc
cagcagggggcagcacaaaagcgatgtgaagaaggcctgtga
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