Triplophysa dalaica: 130434268
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Entry
130434268 CDS
T09616
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
tdw
Triplophysa dalaica
Pathway
tdw03320
PPAR signaling pathway
tdw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130434268 (rxrgb)
03320 PPAR signaling pathway
130434268 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130434268 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tdw03310
]
130434268 (rxrgb)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130434268 (rxrgb)
Nuclear receptors [BR:
tdw03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130434268 (rxrgb)
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GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
130434268
NCBI-ProteinID:
XP_056620291
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All DBs
Position
13:16001982..16017700
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AA seq
448 aa
AA seq
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MDTYSHLNSSALNSPHSQPPPMSSMVGHPSVISSSRPLQSPMITLGSMNGLASPYSVITP
SLTSPSGSLPSTPSMSFNTLGSPQMNSLNMNCSEDIKPPPGLTPLGNISSYQCSSPGSLS
KHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYKCRDCKECLIDKRQRNRCQYCR
YQKCLAMGMKREAVQDERQRGKEKSDNEVESTSSFNEEMPVDKILDAELAVEPKTETYTE
SSPGNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFS
HRSITVKDGILLGTGLHVHRSSAHSAGVGSIFNRVLTELVSKMKDMQMDKTELGCLRAIV
LFNPDAKGLSNAVDVEALREKVYASLETYTKQNYPDQPGRFAKLLLRLPALRSIGLKCLE
HLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtattcgcatctcaactctagtgctctgaattctccccactctcagccccca
cccatgagctctatggtgggtcatccgtccgtcatcagttcctcccgcccactgcagtct
cccatgatcaccctgggctctatgaatggcctggcttcaccatattctgtcatcaccccg
tctctcacctcaccgtcgggttccttgccttctacgcccagtatgagctttaacactctc
ggcagcccacagatgaattccttgaatatgaactgctcagaagacattaagcctccccca
ggattgactcctctgggtaacataagcagctaccagtgcagcagtcctggatccctctct
aaacacatctgtgccatttgtggggaccgatcttcagggaagcattacggtgtttacagt
tgtgaaggatgcaaaggcttctttaaaagaaccattcggaaagacctgacctacaagtgt
cgagactgcaaagaatgcctgattgacaaacgtcagcgcaaccgctgtcagtattgccgc
taccagaagtgcctggctatgggcatgaagagggaagcggtgcaggatgaaaggcagcgc
gggaaggaaaagagcgataatgaggtggaatcgacgagcagctttaatgaagagatgcct
gtggataagattctggatgcagaactcgcagtggaacccaagacagagacatacacagag
agcagccctggaaactcgacaaatgacccggtcactaatatctgccatgcagctgacaag
cagctgttcactctggtggagtgggccaagaggatacctcacttctctgatctgccgcta
gatgatcaggtcattctccttcgagcaggatggaatgagctcctcattgcttcgttctca
catcgctcgatcacagtaaaagatggtatcttactgggcacaggcctccatgttcacagg
agcagtgctcacagtgctggagtggggtccattttcaacagggtattgactgagcttgtg
tcaaaaatgaaggacatgcagatggataaaacagaactgggctgcctcagagccattgtt
ctctttaaccctgatgccaaaggcttgtccaacgcagtggatgtagaagcactgagggag
aaggtttatgcttcacttgagacctacacaaaacagaattaccctgaccagcctggcagg
ttcgctaaacttttattgcgcctccccgccctccgatccatcggcctcaaatgtttggag
catctatttttcttcaagttgattggagacacgcccatagacacattcctaatggaaatg
cttgaagcgccccatcagattacgtga
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