Triplophysa dalaica: 130434459
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Entry
130434459 CDS
T09616
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130434459
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
130434459
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF1651
TYW3
DUF5816
Motif
Other DBs
NCBI-GeneID:
130434459
NCBI-ProteinID:
XP_056620620
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All DBs
Position
13:complement(14212716..14217219)
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AA seq
596 aa
AA seq
DB search
MDEFLTHGYSEPCGRCAAVDWGISGEEQFFCKNCHNVIERTRDMVGECSHYSYNSKISYI
PKPKNTAMEFAQEWMVCEGFQFVLKCQADALVSLGVCLQFKTDVMWNFWKRYLQNTGQAF
VNNPVSAAGFSADLKSESESEPEAGPFCEGSSLTGAPSEGGKPTSDCSNNRRSGSLDAAL
YVKGRKSRNVMTMPRTLALCYLALLWVREAITLADLLRLVNERRVPYLNIQEYLPKEMKI
FGQDSQIFRVDSIPSYSMVHKEAVDLAKVIKLPAFPTVSQDCLLHPIPLTVRYLMESNLP
DGLLVWVHKVIDVASIGDDSFLTFDPVKQKPALVCYDIQAAAVIIVTMKLLFKLDDRVEW
MSYGKAASEKKKKVFNVERWYKIIQPAFERARQKMEREEARQLWKSHKPFITSQKDKSLV
FKKRRVVNHLQHIFQKLTDSSPEQQVSTTTSFSSFHFHWGKEQGSDGRSLHKQRLNCTFK
KNGVKRLTNRKYWHTVLSVCPLTCNDHFSEIEPSLPRMYVWLLDLFSFLLGVSQAQVHKE
VLNVERRFLKRKRPPVPKSTPRRSATKKTPCQSATKSTPSQSATERTLRPRKITNE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatttctcactcatggatacagtgagccatgcggccggtgcgctgctgttgac
tggggcatttctggagaggaacagttcttctgcaaaaactgtcacaatgtgatcgagaga
acaagagacatggtgggggagtgcagccattacagctacaacagcaaaatctcatacatc
ccaaaacccaagaatactgcaatggaatttgcacaagagtggatggtctgtgagggtttt
cagttcgttctgaaatgccaggctgatgctttggttagtcttggtgtttgtttgcagttt
aagacagatgtaatgtggaatttctggaagagatacctgcagaacaccgggcaagctttc
gtcaacaatccagtttccgctgctgggttttcagcagatctgaaatctgagtctgagagt
gaaccagaggctgggccattttgtgaggggtcgtctctgacaggagctccttcagaggga
gggaagccaacctcagactgctccaataatagacggtcaggctctttagatgctgcgtta
tatgtgaaaggaaggaagagccgtaatgttatgaccatgccacggacgctggctctgtgc
tatctggctctgctgtgggtgcgagaggccatcaccctggctgatttactgaggctggtg
aacgagagacgtgttccatatttgaacattcaggagtatcttccaaaagaaatgaaaata
ttcggacaagattcccaaatctttcgagtagattccataccttcatactcaatggtccac
aaagaagctgtagatctggctaaggtcatcaaattgcctgccttcccaactgtttctcaa
gattgcttgctccacccaattccacttactgtccgctatctaatggaatctaacctccct
gatgggcttcttgtttgggtccacaaggttatagatgtagcttctataggagatgactcc
ttcctgacctttgaccctgtcaagcagaagcctgctctcgtatgctatgacattcaggca
gcagctgtcattattgtcaccatgaagctccttttcaagttggatgatcgggtggagtgg
atgtcatatgggaaagcagccagtgagaagaaaaagaaagtgttcaatgtagaaagatgg
tataaaataatccagcctgcctttgagcgagctcgacagaagatggaaagagaagaagcc
cgacaactatggaaatcccacaaacctttcattacatctcagaaagacaagagtttggtt
ttcaaaaagagacgtgttgttaatcacttgcagcacatatttcagaagttaactgactcc
tctccagaacaacaggtttccaccacaacctctttctcaagctttcacttccactgggga
aaagaacagggttcagacggtcgcagtttgcataaacagcggctgaattgtactttcaag
aaaaatggtgtcaagaggctgaccaaccgaaaatactggcatacagttctaagtgtctgc
ccacttacttgtaacgatcatttctcagaaattgagcccagcctgcccaggatgtacgtg
tggctccttgatctcttctcatttctgctgggggtcagtcaagcacaagtccacaaagag
gtcctcaacgtagaacgacggttcctgaagagaaaacgtccgcctgtgcctaaaagcact
ccacgtcggtctgcaactaaaaagactccatgtcaatctgcgactaaaagtacaccaagt
cagtctgcgactgaaaggactctgcgtcctcggaaaataacaaatgagtaa
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