Triplophysa dalaica: 130434670
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Entry
130434670 CDS
T09616
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04010
MAPK signaling pathway
tdw04020
Calcium signaling pathway
tdw04144
Endocytosis
tdw04510
Focal adhesion
tdw04540
Gap junction
tdw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130434670 (pdgfra)
04020 Calcium signaling pathway
130434670 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130434670 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130434670 (pdgfra)
04540 Gap junction
130434670 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130434670 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tdw01001
]
130434670 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tdw04090
]
130434670 (pdgfra)
Enzymes [BR:
tdw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130434670 (pdgfra)
Protein kinases [BR:
tdw01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
130434670 (pdgfra)
CD molecules [BR:
tdw04090
]
Proteins
130434670 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Kinase-like
Motif
Other DBs
NCBI-GeneID:
130434670
NCBI-ProteinID:
XP_056620931
LinkDB
All DBs
Position
13:complement(10974244..10993437)
Genome browser
AA seq
1171 aa
AA seq
DB search
MSQSTIAFFVEVISNGIGPLETASLLDEKEFTIYIDSDPEPKVMWFKDGHPLDNRYITSK
TTHLNGLRYENILVLRHPTEEDSGIYKIVASIGSRISTFSFKLLVEVVSPVLPQSLLAPV
MWPQRDTMEVSLHSTFRLTCRGQARLNWQSPFELHDERHTEKEGLYISTVSVDNATASHT
GEYSCSYHTEYADTDGDESTIYIYVPDPNTPFAPSINIFDHHVMSNDDEMEIPCLVTDPR
TSVSLVHKETDQVLSNVYDSKRGFVGLFSSGTYACRALINGQEHDSIEYIVHGWAVGPEL
RVELKAEKKALLVGETITVDCVARGSEMLEDHWKYPGKLADRGSKTVKENRKDFEIHYTL
TVTNASVKDSGVYACSITDISSNDSQTKELTITVYEREFVFIGSAFGPVETVTLDEVPEY
RVNIESLPAPKVTWIKDGTVLGNVAAEISTRVVRTGETSYQSVLTLIRARSEDSGNYTIN
AQTGDLTSSHSFYLQVKVPPVILDLMDIHHGSTAGQAVVCTARGSPVPEVDWLICKNIKH
CANDSSQWFPLQNNSTDIKVEFEMDNNNIVSQVIFGHLESTIAVRCLARNDMGVVAREVK
LVSNGPHSELTVAAAVLVLLVIVVISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYV
DPMQLPYDSRWEFPRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS
SEKQALMSELKIMTHLGPHLNIVNLLGACTKTGPIYIITEYCFYGDLVNYLHKNRDGFLS
HNTEKCNKKDLDIFGINPADESSRSYVILSFEGKGDYMDMKQADTMQYVPMLEMNEASKY
SSIQKSDYDHPPSQRQFKESEVENLLSDDTNEGLSTLDLLSFTYQVARGMEFLASKNCVH
RDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNMYTTLS
DVWSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMTKPEHASDDVYELMMKCWNSE
PEKRPSFHGLSETVTSLLPSGYKRSYERVNRDFLKSDHPAVTRVQCVDNDDEYMGVLYKN
QGKQKNRESGFEEQRLSSDSGYIIPLPDLDPLSDEEYGKRNRHSSQTSEESAIETGSSSS
MTKREGETLEDITLLDEMCLDSGDLVEDSFL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagtccacgatagctttttttgtggaagttatatccaatggcattgggccccta
gagactgcctcgcttctggatgaaaaagagttcactatttacattgactctgaccccgag
ccaaaggtaatgtggttcaaagatggccatccattggataacagatacatcacctccaag
actacacatctgaatggcctcaggtatgagaacattctggttctccgccatccaacggag
gaagacagtggcatttataaaatcgttgcgtctattggctccaggatttcaacattttca
ttcaaattgttggtagaagttgtatctccagtgttgccacagtctctactggctcctgta
atgtggccccagagagataccatggaggtgtctctccactccaccttccgactcacgtgt
cgaggtcaggcgaggctcaactggcaaagcccctttgaacttcacgacgagagacatact
gaaaaggaaggactctatatctccactgtgtccgtcgacaacgcgacagccagccacact
ggagagtactcctgttcttaccacaccgaatacgcagacacagacggagacgagagcacc
atctacatttatgtgccagatccaaatacaccatttgccccatccatcaacatttttgat
caccatgtgatgtcgaatgacgacgagatggaaatcccgtgtcttgtgaccgatccccgc
accagcgtctctctggttcacaaagagaccgatcaagtcctgtctaatgtctatgacagc
aagcgaggatttgttggcctcttcagttccgggacgtatgcctgtagggctctcatcaat
ggacaggagcatgacagtatagaatacattgttcatggttgggcagtgggccctgagctg
agggttgagctgaaggcagagaagaaagctcttctggtgggtgaaaccattactgtcgat
tgtgtggcgagaggcagtgagatgttggaggaccactggaagtaccctggaaaactggcg
gatcgtgggtcgaagacagtgaaggagaataggaaagattttgagatccactatacactg
actgtgactaacgcctcagttaaggacagtggagtctatgcctgctccatcaccgacatt
tcaagcaatgacagccaaaccaaagagcttaccatcaccgtctatgagcgtgagtttgtc
ttcataggttcagcgtttggtccagtggagaccgttacgctggatgaggtgccagagtat
agggttaacatagagtcattacccgcccccaaagtgacatggataaaggacggcactgtt
ctgggaaacgtcgctgcggagatcagcacccgtgttgtgagaacaggcgagaccagttac
cagagtgtgttgacgttgatcagagccagatcagaagacagcgggaactacactatcaat
gcgcaaacaggcgatttgacttccagccacagtttctaccttcaggttaaagttccccca
gtgattctggacctgatggatatccaccatggctcaactgcaggtcaggctgtggtgtgt
actgcccgcggttcacccgtccctgaagtcgactggttgatctgcaaaaacattaaacac
tgtgccaacgattcctcccaatggttcccacttcagaacaactccacagacatcaaggtg
gaatttgaaatggacaacaacaacattgtcagtcaggtcatcttcggccatctcgaaagc
actattgccgtgcgctgtctcgccaggaatgacatgggcgtcgttgcacgggaagtgaag
ctggtgtcaaatggtccacattcggagcttactgtggccgctgctgttctggtactcctg
gtcattgtagtcatctcactcattgtgctggtgattatctggaaacagaagccacgttat
gagatcagatggcgggtcatagagtccgtcagccctgacggtcacgagtacatctatgtc
gatcccatgcagcttccctacgactcccgctgggagttcccccgagatgggctcgttctc
ggtcgtgtcctcgggtcaggagcgtttggaaaggtggttgaaggcaccgcttatggactg
agtcgttctcaacctgttatgaaagtggctgtgaaaatgcttaaaccaacggcacgttcc
agtgagaaacaggcgttgatgtcagagctgaaaatcatgacccatctggggcctcacctt
aacattgtcaacctgctgggagcatgcaccaaaacaggaccaatctacattatcacagag
tattgtttttacggagacctggtgaactaccttcataagaacagggatgggtttctcagc
cacaacacagagaagtgcaacaaaaaagatttagacatctttggcatcaacccagccgac
gagagcagcaggagctatgtcatcctgtcgttcgaggggaaaggcgattatatggacatg
aagcaggctgacacaatgcaatacgtccccatgctggaaatgaacgaagcctcgaaatac
tcgtccatccagaaatccgattacgaccatccgccctctcaaagacagttcaaggagagt
gaagtcgagaacctgctctcagatgacaccaatgaaggtctgtcaacgttggatcttctc
agtttcacctatcaggtggctcgagggatggagttcttggcctctaagaattgtgtgcac
agagaccttgctgcacgcaatgtcctgctgtctcaaggcaagatagtgaagatatgtgac
tttgggctggccagagacatcatgcatgataacaattatgtctccaaaggaagtaccttc
cttccagtgaagtggatggctccagagagtatttttgataacatgtacactacattgagt
gacgtctggtcttacggcatcttattgtgggagatcttttctcttggtgggactccttat
ccgggtatggttgtggattccagcttctacaacaagatcaagagtggataccgaatgaca
aaacccgagcacgcttctgatgatgtttatgagcttatgatgaaatgctggaacagtgag
ccagagaagagaccatcctttcacggcctgagtgagacagtgacctccctgctgccctct
ggatataagaggagctatgaacgtgtgaatcgtgacttcttgaagagcgatcaccctgcc
gtgacccgagtgcaatgcgtcgacaatgacgatgagtacatgggtgtgctctacaaaaac
cagggcaaacaaaaaaatcgcgagagtggtttcgaagaacagaggctcagttctgacagc
ggttacattattcctttgccggaccttgacccgttgtcagacgaagaatacggcaagagg
aatcgacacagctcacagacatcagaggaaagtgccattgagacgggctccagcagctcg
atgaccaagcgtgagggagagaccctggaggacatcaccttgctggacgagatgtgcttg
gactcaggagacctagtggaggacagtttcctgtaa
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