Triplophysa dalaica: 130434697
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Entry
130434697 CDS
T09616
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdw01009
]
130434697 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130434697 (sh3rf1)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130434697 (sh3rf1)
Protein phosphatases and associated proteins [BR:
tdw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130434697 (sh3rf1)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130434697 (sh3rf1)
BRITE hierarchy
Motif
Pfam:
SH3_1
SH3_9
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
130434697
NCBI-ProteinID:
XP_056620970
EnsemblRapid:
ENSTDLG00000001904
LinkDB
All DBs
Position
13:11593754..11631443
Genome browser
AA seq
880 aa
AA seq
DB search
MNDHIEKDCAKMDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRC
PECRTLVESGVDELPSNILLVRLLDGIKQRPRRTGTAHSPCTNGTTGAGVRVQASGGGQR
DQGPTGTQPQRAQAKTTPVRGVPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENW
YHGEMGGVHGFFPTNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIR
RVDDNWAEGMLGEKIGIFPISYVEFNSAARQLIELDKPSEGAGDASEGPSFASSGPHANG
SQKATGEKKNSKKRHSFTSLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGELS
GGLSSSAPSQVHICTTGLIVTPPPSSPVTTATVFTFPPETSYASLSVDALPPPPPPPPQS
HSTAVGAVALNAGQRPSPAAGEQSGRQRPTVYVALFPYTPRKEDELELRKGEMFLVLERC
QDGWFKGTSMHTGKIGVFPGNYMSPVSRTGSIQSKVPLTLCSQTGRGVTLVSPSPAPLGA
TQGSIDPSKPLPICPNPAPSCSLPAAIVTAAHIPTGQTPKVLMHVTSQMTVNQARSVVRT
AVCHSQDRPTAAVMPIQSHNPMGYHPNTAVCLQPSPVLSSSPGSSSGRMGVAMGCAAASL
TPPNVNAASLDSDAMRPITVVAIPGNTKSLGAGSNNGAACKLDKDCKREKKGLLKLLSNK
KKLRPSPPSSPTLEAETVAMDMPHGAVGPDMAPPSSVVIGVGNNGRVGPGPVEFELSVSS
SSSTEAASHRSISQDNTAPIAPPPRQPCSSLLSMNHDGRPIVCERYRVVVSYPPQSEAEL
ELKEGDIVFVHRKREDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccacattgagaaagattgtgccaaaatggacgaatcggcactccttgacctg
ttggagtgcccggtatgcctggagcgtctagacgccacggcgaaggtgttaccatgccag
cacacgttttgccggcggtgcctgcttggaattgtggggtcacgcggagaactgcgctgc
ccggaatgccgcacgctggtggagagcggagtggatgagttgccgagcaacatcctcctg
gtgaggctgctggacggtatcaagcagaggccaaggaggacgggaactgcgcactcgccg
tgcactaatggaacgaccggagcgggagtccgagtgcaggcctcgggaggtggccagaga
gatcaaggtcccacggggacacagccacagagagctcaggccaagaccactccagtgagg
ggtgttcctcagctaccatgtgccaaggccttgtacaactacgatgggaaagaacctgga
gacctcaagttcagcaagggtgacatcatcatcctgcgccggcaggtggatgagaactgg
taccacggagagatgggtggagtccatggattcttccccaccaacttcgtccaggtcatc
aaaccgctgccacagccgcccccacaatgcaaagccctgtatgactttgagctcaaagac
aaagaagctgataaggactgcctaccgttctcaaaggatgatattctcactgttattcgt
cgagtggatgacaattgggcagaggggatgctgggagaaaagattggcatcttccccata
tcttatgtagagtttaacagtgcagctcgacagctcatagaactggacaaaccgtctgaa
ggtgcaggagacgccagtgaagggccctccttcgcttcatcaggcccccatgcaaacggc
tctcagaaagccaccggggagaagaagaacagtaagaagcgacactccttcacctccttg
acgatgtcccataaaccctgcctggctcctccaccccagagacactccatggagatcagc
gggccggttctgatcagctcctctaaccccacagcggcagcccgaatcggagagctcagt
ggaggcttgtcctccagtgcaccttcacaggtccacatttgcacaacaggactcattgtt
actcctccaccaagcagtcctgtcaccacggcgacagttttcacatttcctcccgagacc
agctatgcctctttatcagtggatgctcttccccctccgccgcctcctccaccccagtca
cattccacagctgtgggcgccgtcgcattgaatgccggacaaagaccgtcacctgctgca
ggtgaacaaagtggacgtcaaagacccacagtgtatgtggcgttgtttccatatacgccc
cgtaaggaggacgagttggagttgaggaagggggagatgtttctggtgctggagcgctgt
caggacggttggttcaaaggaacgtccatgcacaccggcaaaattggagtgtttcctggt
aactacatgagtcctgtcagcaggactggtagcattcagtcaaaagttcctctgaccctt
tgctctcagactgggcgtggtgtcacccttgttagcccctcccctgctcccctcggggcc
acccaggggagtattgaccccagcaaacccctcccaatctgcccaaatcctgctccatca
tgctcactgcctgctgctatagtaacagccgcacacataccaactggacagacgcccaaa
gtgctcatgcatgttacatcacagatgaccgtcaatcaagcccgcagtgtggtcaggaca
gctgtgtgtcacagccaggaccgcccaacagcagcagtgatgcctatccagtcccacaat
cccatgggctaccatcctaacacagctgtgtgtctccagccatcacctgttcttagctcc
agccctggatcttcatctggcagaatgggcgtggctatgggctgtgcagccgcctccctg
accccaccaaatgttaacgccgcttctctagacagtgatgccatgagacccatcactgtg
gttgcaattcctggcaacacaaagtctcttggtgcaggctcgaataatggtgctgcttgt
aaactggataaagactgcaagcgagagaagaaaggccttctgaaactgttgtctaataaa
aagaagctccgcccatctcccccatcatctcctacactggaggcggagactgttgccatg
gacatgccccatggggctgttggacctgatatggctccgcccagctcagtggtcattgga
gttggaaataatggtcgtgtaggacccggtccagtggaatttgaactctctgtatcttca
tcatccagcacagaagcagcatcacataggagcatctcccaggacaacactgctccaatt
gccccaccgccacgacaaccatgctcctcactcctttccatgaatcatgatggacgacct
atcgtgtgtgaacggtatcgtgtggtggtgtcttaccctccccagagcgaagcagagctg
gaactcaaagagggagatattgtatttgtgcacagaaagcgtgaggacggctggtttaaa
ggaaccctacagaggaacggcagaaccggcctgttccccggcagctttgttgacagcatt
taa
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